Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_E19
         (323 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93322-1|CAB07532.1|  256|Homo sapiens c21ORF-HumF09G8.5 protein.      28   7.4  
Y11392-1|CAA72202.1|  256|Homo sapiens hypothetical protein prot...    28   7.4  
U84569-1|AAB46590.1|  255|Homo sapiens YF5 protein.                    28   7.4  
BC072012-1|AAH72012.1|  256|Homo sapiens chromosome 21 open read...    28   7.4  
BC039859-1|AAH39859.1|  653|Homo sapiens transmembrane and coile...    28   7.4  
BC034284-1|AAH34284.2|  181|Homo sapiens TMCC1 protein protein.        28   7.4  
BC031300-1|AAH31300.1|  375|Homo sapiens C21orf2 protein protein.      28   7.4  
AP001754-3|BAA95562.1|  256|Homo sapiens C21orf2 protein.              28   7.4  
AB018322-1|BAA34499.1|  320|Homo sapiens KIAA0779 protein protein.     28   7.4  

>Z93322-1|CAB07532.1|  256|Homo sapiens c21ORF-HumF09G8.5 protein.
          Length = 256

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -2

Query: 313 QLNC-NSKF*SISPDNEEPSISIITLNVNKLQNTQ 212
           +LNC  S+   IS   E PS+ +ITL+VN +   +
Sbjct: 22  KLNCWGSRLTDISICQEMPSLEVITLSVNSISTLE 56


>Y11392-1|CAA72202.1|  256|Homo sapiens hypothetical protein
           protein.
          Length = 256

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -2

Query: 313 QLNC-NSKF*SISPDNEEPSISIITLNVNKLQNTQ 212
           +LNC  S+   IS   E PS+ +ITL+VN +   +
Sbjct: 22  KLNCWGSRLTDISICQEMPSLEVITLSVNSISTLE 56


>U84569-1|AAB46590.1|  255|Homo sapiens YF5 protein.
          Length = 255

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -2

Query: 313 QLNC-NSKF*SISPDNEEPSISIITLNVNKLQNTQ 212
           +LNC  S+   IS   E PS+ +ITL+VN +   +
Sbjct: 22  KLNCWGSRLTDISICQEMPSLEVITLSVNSISTLE 56


>BC072012-1|AAH72012.1|  256|Homo sapiens chromosome 21 open reading
           frame 2 protein.
          Length = 256

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -2

Query: 313 QLNC-NSKF*SISPDNEEPSISIITLNVNKLQNTQ 212
           +LNC  S+   IS   E PS+ +ITL+VN +   +
Sbjct: 22  KLNCWGSRLTDISICQEMPSLEVITLSVNSISTLE 56


>BC039859-1|AAH39859.1|  653|Homo sapiens transmembrane and
           coiled-coil domain family 1 protein.
          Length = 653

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +1

Query: 157 QLTYINKGHVTNLFSGEIIECFVIYLHLTL*WISTVLHCLVKLIKT 294
           QL  +      NL  G++I   +  + + L ++STV +C+V L+KT
Sbjct: 573 QLEGLENATARNLL-GKLINILLAVMAVLLVFVSTVANCVVPLMKT 617


>BC034284-1|AAH34284.2|  181|Homo sapiens TMCC1 protein protein.
          Length = 181

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +1

Query: 157 QLTYINKGHVTNLFSGEIIECFVIYLHLTL*WISTVLHCLVKLIKT 294
           QL  +      NL  G++I   +  + + L ++STV +C+V L+KT
Sbjct: 101 QLEGLENATARNLL-GKLINILLAVMAVLLVFVSTVANCVVPLMKT 145


>BC031300-1|AAH31300.1|  375|Homo sapiens C21orf2 protein protein.
          Length = 375

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -2

Query: 313 QLNC-NSKF*SISPDNEEPSISIITLNVNKLQNTQ 212
           +LNC  S+   IS   E PS+ +ITL+VN +   +
Sbjct: 22  KLNCWGSRLTDISICQEMPSLEVITLSVNSISTLE 56


>AP001754-3|BAA95562.1|  256|Homo sapiens C21orf2 protein.
          Length = 256

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -2

Query: 313 QLNC-NSKF*SISPDNEEPSISIITLNVNKLQNTQ 212
           +LNC  S+   IS   E PS+ +ITL+VN +   +
Sbjct: 22  KLNCWGSRLTDISICQEMPSLEVITLSVNSISTLE 56


>AB018322-1|BAA34499.1|  320|Homo sapiens KIAA0779 protein protein.
          Length = 320

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +1

Query: 157 QLTYINKGHVTNLFSGEIIECFVIYLHLTL*WISTVLHCLVKLIKT 294
           QL  +      NL  G++I   +  + + L ++STV +C+V L+KT
Sbjct: 240 QLEGLENATARNLL-GKLINILLAVMAVLLVFVSTVANCVVPLMKT 284


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,562,629
Number of Sequences: 237096
Number of extensions: 581770
Number of successful extensions: 621
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)