Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_E19
         (323 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   3.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   3.7  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   3.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   3.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   4.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   4.9  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   4.9  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 111 FLRFICPSYDCSFVRSAD 164
           + R + P YDC+  +S D
Sbjct: 407 YSRDVRPKYDCTLEKSQD 424


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 111 FLRFICPSYDCSFVRSAD 164
           + R + P YDC+  +S D
Sbjct: 407 YSRDVRPKYDCTLEKSQD 424


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 192 ISDMPFVYVRQL 157
           I + PFVYVR++
Sbjct: 419 IEEKPFVYVREI 430


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 111 FLRFICPSYDCSFVRSAD 164
           + R + P YDC+  +S D
Sbjct: 407 YSRDVRPKYDCTLEKSQD 424


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 250 WISTVLHCLVKLIKTY 297
           +I T+  CL+ L KTY
Sbjct: 431 FIGTLQRCLLSLEKTY 446


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 250 WISTVLHCLVKLIKTY 297
           +I T+  CL+ L KTY
Sbjct: 469 FIGTLQRCLLSLEKTY 484


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 253 ISTVLHCLVKLIKTYYYNLVV 315
           I T  +C+  ++  YYY+ +V
Sbjct: 215 IFTFSYCIPMILIIYYYSQIV 235


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,863
Number of Sequences: 438
Number of extensions: 1500
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7093251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)