Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_E17
         (425 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    33   9e-04
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   2.9  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   3.8  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   3.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   3.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   5.0  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    20   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 33.5 bits (73), Expect = 9e-04
 Identities = 23/88 (26%), Positives = 39/88 (44%)
 Frame = -2

Query: 334 AVICSLFVFDCVTSSVIISALISDIVSSSFFKLSLIRLLRYFRFTLSSFTIIFETSLFSS 155
           A I  L V+    + +I +  +  ++   +F + L  LL  + F  +   IIF   L   
Sbjct: 106 AFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAF--IIFTVHLLFL 163

Query: 154 VSLYFFTCVFLRNLKGIILCCVVILLNM 71
           + +Y F C F+     ++ CC  I  NM
Sbjct: 164 LCIYHFFCAFIIFTMHLLFCCAFIFFNM 191



 Score = 22.6 bits (46), Expect = 1.6
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
 Frame = -2

Query: 250 SFFKLSLIRLLRY-FRFTLSSFTIIFETSLFSSVSLYFFTCVFLRNLKGIILCCVVILLN 74
           S F +  I LL Y     L      +   +  +V L    C++      ++ CC  I+  
Sbjct: 217 SAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFT 276

Query: 73  M 71
           M
Sbjct: 277 M 277



 Score = 21.4 bits (43), Expect = 3.8
 Identities = 11/41 (26%), Positives = 17/41 (41%)
 Frame = -2

Query: 184 IIFETSLFSSVSLYFFTCVFLRNLKGIILCCVVILLNMEFH 62
           IIF   L   + +Y+F C  +  L     C   I+    F+
Sbjct: 273 IIFTMHLLFLLCIYYFYCALIILLCIYYFCRAFIIFPTHFY 313



 Score = 21.0 bits (42), Expect = 5.0
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = -2

Query: 247 FFKLSLIRLLRYFRFTLSSFTIIFETSLFSSVSLYFFTCVFLRNLKGIILCCVVILL 77
           FF + L+ LL    FTL          LF     YF++   +  +  +  C ++ILL
Sbjct: 188 FFNMHLLFLLCLDYFTLHL--------LFLPCIYYFYSAFIIFTIHLLFYCVLIILL 236


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 155 SFLILFYMRLFAQFEGYY 102
           SFL  FY  +F  FE +Y
Sbjct: 292 SFLNNFYFIIFQVFESFY 309


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 214 YFRFTLSSFTIIFETSLF 161
           YF F ++S+T++   SLF
Sbjct: 57  YFSFYITSYTLLSVYSLF 74


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 106 IILCCVVILLNMEFHHIDLNIIKIITHENPHSFL 5
           IILC +         +ID+ I K +T +N   F+
Sbjct: 119 IILCNIFEAAAKSLIYIDMIIKKNVTQQNSDVFI 152


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 214 YFRFTLSSFTIIFETSLF 161
           YF F ++S+T++   SLF
Sbjct: 57  YFSFYITSYTLLSVYSLF 74


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 161 FVSFLILFYMRLFAQFEGYYTL 96
           + +F+ILFY+ +F     Y +L
Sbjct: 321 YCNFIILFYLSVFVILVYYASL 342


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 334 AVICSLFVFDCVTSSVIISALISD 263
           A+IC  + FD    ++  S L++D
Sbjct: 470 AMICVAYKFDAAMMALRTSFLVND 493


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,610
Number of Sequences: 336
Number of extensions: 1782
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)