Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_E17
         (425 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127075-1|BAC86814.1| 1332|Homo sapiens protein ( Homo sapiens ...    30   3.8  
Z97632-7|CAB10731.1|  399|Homo sapiens bombesin-like receptor 3 ...    29   5.0  
X76498-1|CAA54031.1|  399|Homo sapiens uterine bombesin receptor...    29   5.0  
L08893-1|AAA35604.1|  399|Homo sapiens bombesin receptor subtype...    29   5.0  
BC044801-1|AAH44801.1| 1129|Homo sapiens SLC9A10 protein protein.      29   5.0  
AY585193-1|AAT79496.1|  399|Homo sapiens bombesin-like receptor ...    29   5.0  
AK128084-1|BAC87265.1| 1177|Homo sapiens protein ( Homo sapiens ...    29   5.0  
U77949-1|AAB38317.1|  560|Homo sapiens Cdc6-related protein prot...    29   6.6  
BC025232-1|AAH25232.1|  560|Homo sapiens cell division cycle 6 h...    29   6.6  
AY150310-1|AAN10296.1|  560|Homo sapiens CDC6 cell division cycl...    29   6.6  
AF022109-1|AAC52071.1|  560|Homo sapiens HsCdc18p protein.             29   6.6  

>AK127075-1|BAC86814.1| 1332|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45132 fis, clone BRAWH3037979, highly  similar
           to Ubiquitin carboxyl-terminal hydrolase 24 (EC
           3.1.2.15). ).
          Length = 1332

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +3

Query: 216 LKRRINDNLKKEDDTISLIKAEIITDEVTQSKTNSEQITARPLTSREKEIEWLEN-QLTE 392
           + R +N  L  +      ++ +++ D++T S+   EQ+   P T  E EI WL+N +   
Sbjct: 746 IMRGVNQRLLSQCMEYFDLRCQLL-DDLTTSEM--EQLRISPATMLEDEITWLDNFEPNR 802

Query: 393 HAENETS 413
            AE ETS
Sbjct: 803 TAECETS 809


>Z97632-7|CAB10731.1|  399|Homo sapiens bombesin-like receptor 3
           protein.
          Length = 399

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -2

Query: 214 YFRFTLSSFTIIFETSLFSSVSLYFFTCVFLRNLKGIILCC 92
           +F FT+ S  + F  S  +  +LY+ +  F ++ K  + CC
Sbjct: 308 HFIFTIFSRVLAFSNSCVNPFALYWLSKSFQKHFKAQLFCC 348


>X76498-1|CAA54031.1|  399|Homo sapiens uterine bombesin receptor
           protein.
          Length = 399

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -2

Query: 214 YFRFTLSSFTIIFETSLFSSVSLYFFTCVFLRNLKGIILCC 92
           +F FT+ S  + F  S  +  +LY+ +  F ++ K  + CC
Sbjct: 308 HFIFTIFSRVLAFSNSCVNPFALYWLSKSFQKHFKAQLFCC 348


>L08893-1|AAA35604.1|  399|Homo sapiens bombesin receptor subtype-3
           protein.
          Length = 399

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -2

Query: 214 YFRFTLSSFTIIFETSLFSSVSLYFFTCVFLRNLKGIILCC 92
           +F FT+ S  + F  S  +  +LY+ +  F ++ K  + CC
Sbjct: 308 HFIFTIFSRVLAFSNSCVNPFALYWLSKSFQKHFKAQLFCC 348


>BC044801-1|AAH44801.1| 1129|Homo sapiens SLC9A10 protein protein.
          Length = 1129

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = -2

Query: 286 IISALISDIVSSSFFKLSLIRLLRYFRFTLSSFTIIFETSLFSSVSLYFFTCVFLRNLKG 107
           I+  + S I++S  F +   +L++++  T+    +   + +FS + L F+ C  L  + G
Sbjct: 208 IVGGICSYIIASFLFGILSSKLIQFWMSTVFGDDVNHISLIFSILYLIFYICE-LVGMSG 266

Query: 106 IILCCVV-ILLN 74
           I    +V +LLN
Sbjct: 267 IFTLAIVGLLLN 278


>AY585193-1|AAT79496.1|  399|Homo sapiens bombesin-like receptor 3
           protein.
          Length = 399

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -2

Query: 214 YFRFTLSSFTIIFETSLFSSVSLYFFTCVFLRNLKGIILCC 92
           +F FT+ S  + F  S  +  +LY+ +  F ++ K  + CC
Sbjct: 308 HFIFTIFSRVLAFSNSCVNPFALYWLSKSFQKHFKAQLFCC 348


>AK128084-1|BAC87265.1| 1177|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46205 fis, clone TESTI4010544. ).
          Length = 1177

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = -2

Query: 286 IISALISDIVSSSFFKLSLIRLLRYFRFTLSSFTIIFETSLFSSVSLYFFTCVFLRNLKG 107
           I+  + S I++S  F +   +L++++  T+    +   + +FS + L F+ C  L  + G
Sbjct: 208 IVGGICSYIIASFLFGILSSKLIQFWMSTVFGDDVNHISLIFSILYLIFYICE-LVGMSG 266

Query: 106 IILCCVV-ILLN 74
           I    +V +LLN
Sbjct: 267 IFTLAIVGLLLN 278


>U77949-1|AAB38317.1|  560|Homo sapiens Cdc6-related protein
           protein.
          Length = 560

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = +3

Query: 240 LKKEDDTISLIKAEIITDEVTQSKTNSEQITARPLTSREKEIEWLENQLTEHAENETSAS 419
           LKKE   + L K E    +  Q+K          L +RE+E++ + N L EH   + + S
Sbjct: 140 LKKESACVRLFKQEGTCYQ--QAKLVLNTAVPDRLPAREREMDVIRNFLREHICGKKAGS 197

Query: 420 LY 425
           LY
Sbjct: 198 LY 199


>BC025232-1|AAH25232.1|  560|Homo sapiens cell division cycle 6
           homolog (S. cerevisiae) protein.
          Length = 560

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = +3

Query: 240 LKKEDDTISLIKAEIITDEVTQSKTNSEQITARPLTSREKEIEWLENQLTEHAENETSAS 419
           LKKE   + L K E    +  Q+K          L +RE+E++ + N L EH   + + S
Sbjct: 140 LKKESACVRLFKQEGTCYQ--QAKLVLNTAVPDRLPAREREMDVIRNFLREHICGKKAGS 197

Query: 420 LY 425
           LY
Sbjct: 198 LY 199


>AY150310-1|AAN10296.1|  560|Homo sapiens CDC6 cell division cycle 6
           homolog (S. cerevisiae) protein.
          Length = 560

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = +3

Query: 240 LKKEDDTISLIKAEIITDEVTQSKTNSEQITARPLTSREKEIEWLENQLTEHAENETSAS 419
           LKKE   + L K E    +  Q+K          L +RE+E++ + N L EH   + + S
Sbjct: 140 LKKESACVRLFKQEGTCYQ--QAKLVLNTAVPDRLPAREREMDVIRNFLREHICGKKAGS 197

Query: 420 LY 425
           LY
Sbjct: 198 LY 199


>AF022109-1|AAC52071.1|  560|Homo sapiens HsCdc18p protein.
          Length = 560

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = +3

Query: 240 LKKEDDTISLIKAEIITDEVTQSKTNSEQITARPLTSREKEIEWLENQLTEHAENETSAS 419
           LKKE   + L K E    +  Q+K          L +RE+E++ + N L EH   + + S
Sbjct: 140 LKKESACVRLFKQEGTCYQ--QAKLVLNTAVPDRLPAREREMDVIRNFLREHICGKKAGS 197

Query: 420 LY 425
           LY
Sbjct: 198 LY 199


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,924,242
Number of Sequences: 237096
Number of extensions: 820677
Number of successful extensions: 1729
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1729
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)