Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_E17
(425 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82055-7|CAB04849.1| 387|Caenorhabditis elegans Hypothetical pr... 31 0.35
Z36282-4|CAI06055.2| 801|Caenorhabditis elegans Hypothetical pr... 31 0.46
Z31590-10|CAA83466.3| 801|Caenorhabditis elegans Hypothetical p... 31 0.46
DQ104391-1|AAZ08414.1| 801|Caenorhabditis elegans CNK-1 protein. 31 0.46
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 30 0.60
Z83105-2|CAB05483.1| 434|Caenorhabditis elegans Hypothetical pr... 29 1.1
AC006730-4|ABO16461.1| 254|Caenorhabditis elegans Hypothetical ... 29 1.4
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 29 1.8
AL034393-22|CAD36499.1| 655|Caenorhabditis elegans Hypothetical... 29 1.8
AL034393-21|CAA22320.2| 681|Caenorhabditis elegans Hypothetical... 29 1.8
AF497833-1|AAM18111.1| 655|Caenorhabditis elegans putative Na-H... 29 1.8
AF497832-1|AAM18110.1| 681|Caenorhabditis elegans putative Na-H... 29 1.8
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 29 1.8
U41263-5|AAC24427.1| 400|Caenorhabditis elegans Hypothetical pr... 28 2.4
AF025454-1|AAC71152.2| 378|Caenorhabditis elegans Hypothetical ... 28 3.2
Z83120-8|CAE46678.2| 511|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z83120-7|CAB51466.2| 514|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z82078-3|CAB04942.1| 313|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z81137-3|CAB03471.1| 338|Caenorhabditis elegans Hypothetical pr... 27 4.3
U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical pr... 27 4.3
U55369-1|AAK52175.1| 1247|Caenorhabditis elegans Cystic fibrosis... 27 4.3
U00064-1|AAD31935.1| 845|Caenorhabditis elegans Hypothetical pr... 27 4.3
AY523516-1|AAR98638.1| 459|Caenorhabditis elegans acetylcholine... 27 4.3
AY523515-1|AAR98637.1| 553|Caenorhabditis elegans acetylcholine... 27 4.3
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 27 5.6
L23651-7|AAM22042.1| 926|Caenorhabditis elegans Associated with... 27 5.6
L23651-6|AAK84496.3| 960|Caenorhabditis elegans Associated with... 27 5.6
AL033510-4|CAA22070.2| 343|Caenorhabditis elegans Hypothetical ... 27 5.6
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 27 5.6
Z92828-1|CAB07337.1| 512|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 27 7.4
U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily ass... 27 7.4
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 27 7.4
AL032637-13|CAA21615.1| 709|Caenorhabditis elegans Hypothetical... 27 7.4
Z74475-6|CAA98961.1| 299|Caenorhabditis elegans Hypothetical pr... 26 9.8
Z70686-9|CAA94614.3| 915|Caenorhabditis elegans Hypothetical pr... 26 9.8
AL023811-2|CAA19423.1| 299|Caenorhabditis elegans Hypothetical ... 26 9.8
AF016448-17|AAB65962.1| 656|Caenorhabditis elegans Hypothetical... 26 9.8
>Z82055-7|CAB04849.1| 387|Caenorhabditis elegans Hypothetical
protein T26H2.8 protein.
Length = 387
Score = 31.1 bits (67), Expect = 0.35
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = -2
Query: 199 LSSFTIIFETSLFSSVSLYFFTCVFLRNLKGIILCCVVILLNMEF 65
L++ T IF T+L S + Y++ C+ G+++CC++I N+ +
Sbjct: 260 LANVTFIF-TNLGSLIDTYYYICMI-----GLMICCIIISSNLMY 298
>Z36282-4|CAI06055.2| 801|Caenorhabditis elegans Hypothetical
protein R01H10.8 protein.
Length = 801
Score = 30.7 bits (66), Expect = 0.46
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 213 YLKRRINDNLKKEDDTISLIKAEII-TDEVTQSKTNSEQITARPL 344
YL N N K+ + I+LIKA I + ++ SK N +ITA PL
Sbjct: 668 YLLLYTNQNTKRPEMVINLIKATISDSTDLKTSKKNIFRITAAPL 712
>Z31590-10|CAA83466.3| 801|Caenorhabditis elegans Hypothetical
protein R01H10.8 protein.
Length = 801
Score = 30.7 bits (66), Expect = 0.46
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 213 YLKRRINDNLKKEDDTISLIKAEII-TDEVTQSKTNSEQITARPL 344
YL N N K+ + I+LIKA I + ++ SK N +ITA PL
Sbjct: 668 YLLLYTNQNTKRPEMVINLIKATISDSTDLKTSKKNIFRITAAPL 712
>DQ104391-1|AAZ08414.1| 801|Caenorhabditis elegans CNK-1 protein.
Length = 801
Score = 30.7 bits (66), Expect = 0.46
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 213 YLKRRINDNLKKEDDTISLIKAEII-TDEVTQSKTNSEQITARPL 344
YL N N K+ + I+LIKA I + ++ SK N +ITA PL
Sbjct: 668 YLLLYTNQNTKRPEMVINLIKATISDSTDLKTSKKNIFRITAAPL 712
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 30.3 bits (65), Expect = 0.60
Identities = 22/90 (24%), Positives = 36/90 (40%)
Frame = +3
Query: 138 KKYKETDEXXXXXXXXXXXXXXKRKYLKRRINDNLKKEDDTISLIKAEIITDEVTQSKTN 317
KK K+T+E +RK K ++ KKE++ E DEV K +
Sbjct: 99 KKSKKTEEKDKLSVKKTQETKSERKDKKDERKEDDKKEENKEKSKDEEKKKDEVKDKKED 158
Query: 318 SEQITARPLTSREKEIEWLENQLTEHAENE 407
+ +P EK+ E+ + E + E
Sbjct: 159 EKMDDKKPGEKEEKKEEFKKEMKKEEKKEE 188
>Z83105-2|CAB05483.1| 434|Caenorhabditis elegans Hypothetical
protein F14H3.2 protein.
Length = 434
Score = 29.5 bits (63), Expect = 1.1
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = -2
Query: 226 RLLRYFRFTLSSFTIIFETSLFSSVSLYFFTCVFLR 119
++++ R+ L + + ++F +V +YFF C+F R
Sbjct: 234 KIIKLTRYDLIPIPLAYPQAVFLAVRIYFFFCLFTR 269
>AC006730-4|ABO16461.1| 254|Caenorhabditis elegans Hypothetical
protein Y27F2A.10 protein.
Length = 254
Score = 29.1 bits (62), Expect = 1.4
Identities = 28/108 (25%), Positives = 47/108 (43%)
Frame = -2
Query: 337 LAVICSLFVFDCVTSSVIISALISDIVSSSFFKLSLIRLLRYFRFTLSSFTIIFETSLFS 158
LAV+ + CVT +VI + + ++ + ++S I+L RY + + S SL
Sbjct: 112 LAVLACMEALFCVTVAVITTWDMFKMLKALQLRVSKIQLQRY-KSAIISLVSQMAASLLL 170
Query: 157 SVSLYFFTCVFLRNLKGIILCCVVILLNMEFHHIDLNIIKIITHENPH 14
V+ L N + LL H I +N+I +IT P+
Sbjct: 171 LVAFVCLLATVLTNFSANQAIAELALLIGAQHSI-VNVIVLITTTPPY 217
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 28.7 bits (61), Expect = 1.8
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +3
Query: 234 DNLKKEDDTISLIKAEIITDEVTQSKTNSEQITARPLTSREKEIEWLENQLTEHAENETS 413
D++ + +S IK TD+ +Q KTN +++ P S K+ +N+ ++ +N+TS
Sbjct: 74 DSVNEIQKGVSGIKISSDTDDRSQKKTNVDKVA--PPHSSTKQFGTNQNKTSKSDQNKTS 131
>AL034393-22|CAD36499.1| 655|Caenorhabditis elegans Hypothetical
protein Y18D10A.6b protein.
Length = 655
Score = 28.7 bits (61), Expect = 1.8
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = -2
Query: 292 SVIISALISDIVSSSFFKLSLIRLLRY-FRFTLSSFTIIFETSLFSSVSLYFFTCVFLRN 116
S I++ L I S F + ++ + + FR T + + + ETS F+ + + FFT + L
Sbjct: 339 SGIMAILFCGISMSQFTRHNVSPIAQITFRHTFRTISFVAETSTFAYIGMAFFT-IKLNF 397
Query: 115 LKGIILCCVVILL 77
+I VV+ L
Sbjct: 398 APWLIFWSVVLCL 410
>AL034393-21|CAA22320.2| 681|Caenorhabditis elegans Hypothetical
protein Y18D10A.6a protein.
Length = 681
Score = 28.7 bits (61), Expect = 1.8
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = -2
Query: 292 SVIISALISDIVSSSFFKLSLIRLLRY-FRFTLSSFTIIFETSLFSSVSLYFFTCVFLRN 116
S I++ L I S F + ++ + + FR T + + + ETS F+ + + FFT + L
Sbjct: 365 SGIMAILFCGISMSQFTRHNVSPIAQITFRHTFRTISFVAETSTFAYIGMAFFT-IKLNF 423
Query: 115 LKGIILCCVVILL 77
+I VV+ L
Sbjct: 424 APWLIFWSVVLCL 436
>AF497833-1|AAM18111.1| 655|Caenorhabditis elegans putative Na-H
exchanger isoform 8b protein.
Length = 655
Score = 28.7 bits (61), Expect = 1.8
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = -2
Query: 292 SVIISALISDIVSSSFFKLSLIRLLRY-FRFTLSSFTIIFETSLFSSVSLYFFTCVFLRN 116
S I++ L I S F + ++ + + FR T + + + ETS F+ + + FFT + L
Sbjct: 339 SGIMAILFCGISMSQFTRHNVSPIAQITFRHTFRTISFVAETSTFAYIGMAFFT-IKLNF 397
Query: 115 LKGIILCCVVILL 77
+I VV+ L
Sbjct: 398 APWLIFWSVVLCL 410
>AF497832-1|AAM18110.1| 681|Caenorhabditis elegans putative Na-H
exchanger isoform 8a protein.
Length = 681
Score = 28.7 bits (61), Expect = 1.8
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = -2
Query: 292 SVIISALISDIVSSSFFKLSLIRLLRY-FRFTLSSFTIIFETSLFSSVSLYFFTCVFLRN 116
S I++ L I S F + ++ + + FR T + + + ETS F+ + + FFT + L
Sbjct: 365 SGIMAILFCGISMSQFTRHNVSPIAQITFRHTFRTISFVAETSTFAYIGMAFFT-IKLNF 423
Query: 115 LKGIILCCVVILL 77
+I VV+ L
Sbjct: 424 APWLIFWSVVLCL 436
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 28.7 bits (61), Expect = 1.8
Identities = 22/90 (24%), Positives = 35/90 (38%)
Frame = +3
Query: 138 KKYKETDEXXXXXXXXXXXXXXKRKYLKRRINDNLKKEDDTISLIKAEIITDEVTQSKTN 317
KK K+T+E +RK K ++ KKE+ E DEV K +
Sbjct: 93 KKSKKTEEKDKISVKKTQETKSERKDKKDEKKEDEKKEESKEKSKDEEKKKDEVKDKKED 152
Query: 318 SEQITARPLTSREKEIEWLENQLTEHAENE 407
++ +P EK+ E + E + E
Sbjct: 153 EKKDDKKPGEKEEKKEEVKKETKKEEKKEE 182
>U41263-5|AAC24427.1| 400|Caenorhabditis elegans Hypothetical
protein T19D12.7 protein.
Length = 400
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -2
Query: 307 DCVTSSVIISALISDIVSSSFFKLSLIRLLRYFRF 203
D + S V+ AL + SFF +SL LL+ FRF
Sbjct: 366 DLLDSKVVAEALKTAFTVFSFFFISLFILLQVFRF 400
>AF025454-1|AAC71152.2| 378|Caenorhabditis elegans Hypothetical
protein F34D6.1 protein.
Length = 378
Score = 27.9 bits (59), Expect = 3.2
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = -2
Query: 136 TCVFLRNLKGIILCCVVILLNMEFHHIDLNIIKIITHENPHSFLV 2
T V N+K CC +IL +F+ DLN+I E P S LV
Sbjct: 265 TWVTTENIKIFGNCCSLILYETQFNSEDLNMILKDWMEAPASPLV 309
>Z83120-8|CAE46678.2| 511|Caenorhabditis elegans Hypothetical
protein R06A4.10b protein.
Length = 511
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = -2
Query: 265 DIVSSSFFKLSLIRLLRYFRFTLSSFTIIFETSLFSSVSLYFF 137
+++ + +KLS + LR+F F + S ++F + F + + +F
Sbjct: 101 ELLYPTIYKLSCLLNLRFFPFDVQSCRLLFGSWTFDNTKIDYF 143
>Z83120-7|CAB51466.2| 514|Caenorhabditis elegans Hypothetical
protein R06A4.10a protein.
Length = 514
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = -2
Query: 265 DIVSSSFFKLSLIRLLRYFRFTLSSFTIIFETSLFSSVSLYFF 137
+++ + +KLS + LR+F F + S ++F + F + + +F
Sbjct: 101 ELLYPTIYKLSCLLNLRFFPFDVQSCRLLFGSWTFDNTKIDYF 143
>Z82078-3|CAB04942.1| 313|Caenorhabditis elegans Hypothetical
protein W09D6.2 protein.
Length = 313
Score = 27.5 bits (58), Expect = 4.3
Identities = 20/101 (19%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = -2
Query: 334 AVICSLFVFDCVTSSVIISALISDIVSSSFFKLSLIRL-LRYFRFTLSSFTIIFETSLFS 158
A++ ++ F V+ + ++ LI S + + + F FT + + LF+
Sbjct: 6 AILLNISAFCAVSINFLLILLILTKSPKSLGSYKFLMIYINLFEFTYAILYCAEKPDLFT 65
Query: 157 SVSLYFFTCVFLRNLKGIILCCVVILLNMEFHHIDLNIIKI 35
S +F + +L + C++ LL + F I + I+ +
Sbjct: 66 KESAFFLIVNWKESLFPKFIACILDLLFVGFFGISIAILAL 106
>Z81137-3|CAB03471.1| 338|Caenorhabditis elegans Hypothetical
protein W02D9.4 protein.
Length = 338
Score = 27.5 bits (58), Expect = 4.3
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -2
Query: 214 YFRFTLSSFTIIFETSLFSSVSLYFFTCVFLRNLKGIILCCV--VILLNME 68
Y RF S + F +FS SLY FT + L NLK + + + VI L M+
Sbjct: 233 YIRFLPDSNSTFF---VFSCYSLYLFTNLLLLNLKLLFINVLSQVIYLKMQ 280
>U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical
protein F55F8.7 protein.
Length = 518
Score = 27.5 bits (58), Expect = 4.3
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +3
Query: 213 YLKRRINDNLK--KEDDTISLIKAEIITDEVTQSKT--NSEQITARPLTSREKEIEWLEN 380
Y ++ + +K K + T++ K E I + S T N+E T+ PL ++ W +
Sbjct: 289 YYPEKLGEVVKFGKYEITLTECKEEAIAGTILNSLTVINTEDATSEPLYMNHVQVPWWPD 348
Query: 381 QL 386
QL
Sbjct: 349 QL 350
>U55369-1|AAK52175.1| 1247|Caenorhabditis elegans Cystic fibrosis
transmembrane conductanceregulator homolog protein 1
protein.
Length = 1247
Score = 27.5 bits (58), Expect = 4.3
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -2
Query: 325 CSLFVFDCVTSSVIISALISDIVSSSFFKLSLIRLLR--YFRFTLSSFTI 182
C +VF S ISA+IS ++S +FF L+ ++ R Y T + F +
Sbjct: 729 CPQYVFIQTMSFFAISAIISTMLSYTFFVLTNVQTSRKLYQHITSAIFAV 778
>U00064-1|AAD31935.1| 845|Caenorhabditis elegans Hypothetical
protein ZC155.3 protein.
Length = 845
Score = 27.5 bits (58), Expect = 4.3
Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Frame = +3
Query: 147 KETDEXXXXXXXXXXXXXXKRKYLKRRINDNLKKEDDTISLIKAEIITDEVTQSKTNSEQ 326
+E+DE KR + + + DD E +SK +
Sbjct: 679 EESDESQEALTIRAPRQRAKRPIERVSRRNRRDQSDDDSDSENEERYATAPKKSKVKGKA 738
Query: 327 ITARPLTSREKEIEWLENQ-LTEHAE 401
+ P +REK +E + NQ LT H E
Sbjct: 739 VVRAPKMTREKWLEEMLNQFLTAHGE 764
>AY523516-1|AAR98638.1| 459|Caenorhabditis elegans acetylcholine
receptor alternativevariant b protein.
Length = 459
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = -2
Query: 265 DIVSSSFFKLSLIRLLRYFRFTLSSFTIIFETSLFSSVSLYFF 137
+++ + +KLS + LR+F F + S ++F + F + + +F
Sbjct: 46 ELLYPTIYKLSCLLNLRFFPFDVQSCRLLFGSWTFDNTKIDYF 88
>AY523515-1|AAR98637.1| 553|Caenorhabditis elegans acetylcholine
receptor 20 (63.9kD) alternative variant a protein.
Length = 553
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = -2
Query: 265 DIVSSSFFKLSLIRLLRYFRFTLSSFTIIFETSLFSSVSLYFF 137
+++ + +KLS + LR+F F + S ++F + F + + +F
Sbjct: 143 ELLYPTIYKLSCLLNLRFFPFDVQSCRLLFGSWTFDNTKIDYF 185
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical protein
Y37A1B.1a protein.
Length = 1222
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 204 KRKYLKRRINDNLKKEDDTISLIKAEIITDEVTQSKTNSEQITARPLTSRE 356
K + K+ + K+DD +S AE T+E +Q S + A P T E
Sbjct: 1152 KEEKSKKDEKEKTDKKDDKVSEKSAEKSTEEPSQEVPASAEQAAEPSTEAE 1202
>L23651-7|AAM22042.1| 926|Caenorhabditis elegans Associated with
ran (nuclear import/export) function protein 2, isoform
b protein.
Length = 926
Score = 27.1 bits (57), Expect = 5.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 286 IISALISDIVSSSFFKLSLIRLLRYF 209
+IS L S++V+ FKL L L R+F
Sbjct: 898 VISRLFSELVARGHFKLELALLQRFF 923
>L23651-6|AAK84496.3| 960|Caenorhabditis elegans Associated with ran
(nuclear import/export) function protein 2, isoform a
protein.
Length = 960
Score = 27.1 bits (57), Expect = 5.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 286 IISALISDIVSSSFFKLSLIRLLRYF 209
+IS L S++V+ FKL L L R+F
Sbjct: 932 VISRLFSELVARGHFKLELALLQRFF 957
>AL033510-4|CAA22070.2| 343|Caenorhabditis elegans Hypothetical
protein Y40H7A.6 protein.
Length = 343
Score = 27.1 bits (57), Expect = 5.6
Identities = 20/84 (23%), Positives = 37/84 (44%)
Frame = -2
Query: 319 LFVFDCVTSSVIISALISDIVSSSFFKLSLIRLLRYFRFTLSSFTIIFETSLFSSVSLYF 140
L +F C TSS I+ A+ S + +FF + I LL +F + + F S
Sbjct: 10 LELFRC-TSSGILEAMNSIWIKINFFLSTSIILLTFFASIYAVRVLKFHNVYSSGTQFLL 68
Query: 139 FTCVFLRNLKGIILCCVVILLNME 68
F+ + N ++ + + L ++
Sbjct: 69 FSLLISVNFNQMVYLVIQVRLQIQ 92
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 204 KRKYLKRRINDNLKKEDDTISLIKAEIITDEVTQSKTNSEQITARPLTSRE 356
K + K+ + K+DD +S AE T+E +Q S + A P T E
Sbjct: 1152 KEEKSKKDEKEKTDKKDDKVSEKSAEKSTEEPSQEVPASAEQAAEPSTEAE 1202
>Z92828-1|CAB07337.1| 512|Caenorhabditis elegans Hypothetical
protein C37A5.1 protein.
Length = 512
Score = 26.6 bits (56), Expect = 7.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 184 IIFETSLFSSVSLYFFTCVFLR 119
I + +F +V +YFFTC+F R
Sbjct: 234 IAYPQVVFFAVRVYFFTCLFTR 255
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical protein
T14G8.3b protein.
Length = 905
Score = 26.6 bits (56), Expect = 7.4
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 243 KKEDDTISLIKAEIITDEVTQSKTNSEQITARPLTSREKEIEWLENQLTEHAENET 410
KKE DT+ K E T+ T+ + N EQ T P + + + E+ TE + +T
Sbjct: 846 KKEKDTVKERKEEETTETTTEDQAN-EQQTPPPFENDNTKDD--ESASTEEPKKDT 898
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical protein
T14G8.3a protein.
Length = 921
Score = 26.6 bits (56), Expect = 7.4
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 243 KKEDDTISLIKAEIITDEVTQSKTNSEQITARPLTSREKEIEWLENQLTEHAENET 410
KKE DT+ K E T+ T+ + N EQ T P + + + E+ TE + +T
Sbjct: 862 KKEKDTVKERKEEETTETTTEDQAN-EQQTPPPFENDNTKDD--ESASTEEPKKDT 914
>U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform e protein.
Length = 2702
Score = 26.6 bits (56), Expect = 7.4
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +3
Query: 237 NLKKEDDTISLIKAEIITDEV---TQSKTNSEQI--TARPLTSREKEIEWLENQLTEHAE 401
N+ K+DD SLIK II++ + T S T +E I T P +R E ++ + ++ +
Sbjct: 1049 NMNKKDDFESLIKTIIISNGIESKTLSCTAAEHIEATRNPEFNRPAEFSDIQKTVVDYNK 1108
Query: 402 NETSASL 422
E ASL
Sbjct: 1109 IE-GASL 1114
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 26.6 bits (56), Expect = 7.4
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +3
Query: 237 NLKKEDDTISLIKAEIITDEV---TQSKTNSEQI--TARPLTSREKEIEWLENQLTEHAE 401
N+ K+DD SLIK II++ + T S T +E I T P +R E ++ + ++ +
Sbjct: 5895 NMNKKDDFESLIKTIIISNGIESKTLSCTAAEHIEATRNPEFNRPAEFSDIQKTVVDYNK 5954
Query: 402 NETSASL 422
E ASL
Sbjct: 5955 IE-GASL 5960
>AL032637-13|CAA21615.1| 709|Caenorhabditis elegans Hypothetical
protein Y43F8C.14 protein.
Length = 709
Score = 26.6 bits (56), Expect = 7.4
Identities = 9/36 (25%), Positives = 22/36 (61%)
Frame = +3
Query: 231 NDNLKKEDDTISLIKAEIITDEVTQSKTNSEQITAR 338
++N + DD ++ + ++ DEV ++ NSE + ++
Sbjct: 172 SENFENSDDDVANFQELLVLDEVLENAENSENLESQ 207
>Z74475-6|CAA98961.1| 299|Caenorhabditis elegans Hypothetical
protein C51F7.2 protein.
Length = 299
Score = 26.2 bits (55), Expect = 9.8
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = -2
Query: 292 SVIISALISDIVSSSFFKLSLIRLLRYFRFTLSSFTIIFETSLFSSVSLYFFTCVFLRNL 113
+ IS++I I S + + + I +++ + SSF IF F ++ Y VF+R
Sbjct: 6 TTFISSVIYGIPSVALYITTCIVIIKNNKLFDSSFYQIFMFDGFMNIFTYIMGLVFMRLT 65
Query: 112 KGIILCCVVILLNMEFHHI 56
+ C L+ F HI
Sbjct: 66 S---ITCYNCLMAPIFRHI 81
>Z70686-9|CAA94614.3| 915|Caenorhabditis elegans Hypothetical
protein R10H10.7 protein.
Length = 915
Score = 26.2 bits (55), Expect = 9.8
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +3
Query: 213 YLKRRINDNLKKEDDTISLIKAEIITDEVTQSKTNSEQITARPLTSREKEIEW 371
Y+ ++ +DD + L+ AE +T E +S + ++PLT E++W
Sbjct: 501 YMLSAVDLETTAKDDPVILMIAEYLTSETNKSCVIKLKDDSKPLT-HGTELDW 552
>AL023811-2|CAA19423.1| 299|Caenorhabditis elegans Hypothetical
protein C51F7.2 protein.
Length = 299
Score = 26.2 bits (55), Expect = 9.8
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = -2
Query: 292 SVIISALISDIVSSSFFKLSLIRLLRYFRFTLSSFTIIFETSLFSSVSLYFFTCVFLRNL 113
+ IS++I I S + + + I +++ + SSF IF F ++ Y VF+R
Sbjct: 6 TTFISSVIYGIPSVALYITTCIVIIKNNKLFDSSFYQIFMFDGFMNIFTYIMGLVFMRLT 65
Query: 112 KGIILCCVVILLNMEFHHI 56
+ C L+ F HI
Sbjct: 66 S---ITCYNCLMAPIFRHI 81
>AF016448-17|AAB65962.1| 656|Caenorhabditis elegans Hypothetical
protein F41E6.14 protein.
Length = 656
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -1
Query: 158 VSFLILFYMRLFAQFEGYYTLLCGHLAKYGVSPHRFEYNQNNN 30
++ +ILF +L FE Y L + ++ + F+ +Q NN
Sbjct: 169 LAIIILFLFQLLTPFELSYCFLASRVWQFLLGSVAFDLSQKNN 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,589,701
Number of Sequences: 27780
Number of extensions: 156285
Number of successful extensions: 545
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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