Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_E17
         (425 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   2.5  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   3.3  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   3.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   7.6  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 140 FYMRLFAQFEGYYTLLC 90
           FY+ LF   + YY + C
Sbjct: 211 FYIPLFVMIQVYYKIFC 227


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 152 FLILFYMRLFAQFEGYYTLLCGHLAKYGV 66
           F+ILFY RL +    +  +L     K  V
Sbjct: 235 FIILFYSRLLSSIRNHEKMLREQAKKMNV 263


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 152 FLILFYMRLFAQFEGYYTLLCGHLAKYGV 66
           F+ILFY RL +    +  +L     K  V
Sbjct: 235 FIILFYSRLLSSIRNHEKMLREQAKKMNV 263


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 349 LVRGLAVICSLFVFDCVTSSVIISALISD 263
           +V G+ +IC L  F C     I + L +D
Sbjct: 623 IVLGVFLICWLPFFTCNIMDAICTKLTAD 651


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,287
Number of Sequences: 438
Number of extensions: 2073
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10997463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)