Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_E14
(300 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily ass... 53 3e-08
Z50857-5|CAJ43436.1| 719|Caenorhabditis elegans Hypothetical pr... 28 1.4
Z50857-4|CAC42283.1| 694|Caenorhabditis elegans Hypothetical pr... 28 1.4
Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical pr... 28 1.4
U41993-7|AAA83450.2| 733|Caenorhabditis elegans Temporarily ass... 28 1.4
AF136239-1|AAD34463.1| 694|Caenorhabditis elegans DAF-12 A2 pro... 28 1.4
AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1 pro... 28 1.4
Z82072-1|CAB04920.2| 467|Caenorhabditis elegans Hypothetical pr... 27 1.9
AL032636-6|CAB54421.1| 467|Caenorhabditis elegans Hypothetical ... 27 1.9
Z81593-6|CAB04740.2| 367|Caenorhabditis elegans Hypothetical pr... 27 2.5
U97404-2|AAB93309.1| 795|Caenorhabditis elegans Acid-sensing/am... 27 2.5
Z81521-4|CAB04229.1| 367|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z50795-1|CAA90662.1| 502|Caenorhabditis elegans Hypothetical pr... 26 4.4
L25598-8|AAY86212.1| 185|Caenorhabditis elegans Hypothetical pr... 26 4.4
Z80215-1|CAB02268.2| 282|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z78013-2|CAB01424.1| 453|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z83319-1|CAB05908.1| 322|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z81492-6|CAB04034.1| 416|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z75713-3|CAB54301.1| 419|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z75713-2|CAB00051.2| 422|Caenorhabditis elegans Hypothetical pr... 25 7.6
X51321-1|CAA35704.1| 422|Caenorhabditis elegans hypothetical pr... 25 7.6
U40952-2|AAA81737.1| 818|Caenorhabditis elegans Hypothetical pr... 25 7.6
U21317-5|AAA62526.2| 895|Caenorhabditis elegans Hypothetical pr... 25 7.6
>U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily
assigned gene nameprotein 345 protein.
Length = 439
Score = 53.2 bits (122), Expect = 3e-08
Identities = 29/96 (30%), Positives = 50/96 (52%)
Frame = +3
Query: 12 VSDSPYAIQSNIESSELNSLINALLKETAPTVEKAIEFDFLVCGELLCSSLSEHLQEKGV 191
+ D+ + + + E ++N L+N + E K F+FLV L +SL+E ++E V
Sbjct: 35 IPDAVFDVPTGAECDDMNLLLNKTI-EANDGAWKERRFEFLVGETFLRTSLAEFIEEYEV 93
Query: 192 STEDTIEIEYLVRFPAPTPQDCLMHDDWVSAVHTHN 299
TE +++E ++ AP P + DWVS+V N
Sbjct: 94 ETETILKVECVIGIEAPKPLHDIQAPDWVSSVQIAN 129
>Z50857-5|CAJ43436.1| 719|Caenorhabditis elegans Hypothetical
protein F11A1.3d protein.
Length = 719
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -3
Query: 187 PFSCKCSDSD--EHNSSPHTRKSNSMAFSTVGAVSFNNA 77
P+S SD HNS+ + N M STV A+ N+A
Sbjct: 352 PYSAPMSDMSLSRHNSTSSGTEKNHMTHSTVSAIPGNSA 390
>Z50857-4|CAC42283.1| 694|Caenorhabditis elegans Hypothetical
protein F11A1.3b protein.
Length = 694
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -3
Query: 187 PFSCKCSDSD--EHNSSPHTRKSNSMAFSTVGAVSFNNA 77
P+S SD HNS+ + N M STV A+ N+A
Sbjct: 327 PYSAPMSDMSLSRHNSTSSGTEKNHMTHSTVSAIPGNSA 365
>Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical
protein F11A1.3a protein.
Length = 753
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -3
Query: 187 PFSCKCSDSD--EHNSSPHTRKSNSMAFSTVGAVSFNNA 77
P+S SD HNS+ + N M STV A+ N+A
Sbjct: 386 PYSAPMSDMSLSRHNSTSSGTEKNHMTHSTVSAIPGNSA 424
>U41993-7|AAA83450.2| 733|Caenorhabditis elegans Temporarily
assigned gene nameprotein 153, isoform b protein.
Length = 733
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -3
Query: 202 SSVDTPFSCKCSDSDEHNSSPHTRKSNSMAFSTVG 98
+ DT S SD NSSP +RKS S S G
Sbjct: 42 TGADTNLSKNTKSSDSANSSPGSRKSTSPPVSKKG 76
>AF136239-1|AAD34463.1| 694|Caenorhabditis elegans DAF-12 A2
protein.
Length = 694
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -3
Query: 187 PFSCKCSDSD--EHNSSPHTRKSNSMAFSTVGAVSFNNA 77
P+S SD HNS+ + N M STV A+ N+A
Sbjct: 327 PYSAPMSDMSLSRHNSTSSGTEKNHMTHSTVSAIPGNSA 365
>AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1
protein.
Length = 753
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -3
Query: 187 PFSCKCSDSD--EHNSSPHTRKSNSMAFSTVGAVSFNNA 77
P+S SD HNS+ + N M STV A+ N+A
Sbjct: 386 PYSAPMSDMSLSRHNSTSSGTEKNHMTHSTVSAIPGNSA 424
>Z82072-1|CAB04920.2| 467|Caenorhabditis elegans Hypothetical
protein W05H12.1 protein.
Length = 467
Score = 27.5 bits (58), Expect = 1.9
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = -3
Query: 262 IKQSCGVGA--GNLTRYSISIVSSVDTPFSCKCSDSDEHNSSPHTRK 128
I + C G+ G R D PF+C C+ D NS +RK
Sbjct: 65 IVKGCAKGSMLGKDVRSHCEYAEDTDEPFTCFCNGKDLCNSRKSSRK 111
>AL032636-6|CAB54421.1| 467|Caenorhabditis elegans Hypothetical
protein W05H12.1 protein.
Length = 467
Score = 27.5 bits (58), Expect = 1.9
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = -3
Query: 262 IKQSCGVGA--GNLTRYSISIVSSVDTPFSCKCSDSDEHNSSPHTRK 128
I + C G+ G R D PF+C C+ D NS +RK
Sbjct: 65 IVKGCAKGSMLGKDVRSHCEYAEDTDEPFTCFCNGKDLCNSRKSSRK 111
>Z81593-6|CAB04740.2| 367|Caenorhabditis elegans Hypothetical
protein T20B3.12 protein.
Length = 367
Score = 27.1 bits (57), Expect = 2.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 133 WYVGNCCARHYQNICKRKVYQ 195
WY G+C A + ICKR++ +
Sbjct: 346 WYGGDCMASNNYFICKRRILE 366
>U97404-2|AAB93309.1| 795|Caenorhabditis elegans
Acid-sensing/amiloride-sensitiveion channel family
protein 1 protein.
Length = 795
Score = 27.1 bits (57), Expect = 2.5
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = -3
Query: 286 TADTQSSCIKQ----SCGVGAGNLTRYSISIVSSVDTPFSCKCSDSDEHNSSPHTRK 128
T Q SCI++ +CG G Y S VD P+ +C ++ H ++ ++K
Sbjct: 594 TEGCQRSCIQKHLSKTCGCGDPRFPPYRESKNCPVDDPYKRECIKNEMHVATRDSKK 650
>Z81521-4|CAB04229.1| 367|Caenorhabditis elegans Hypothetical
protein F32A11.6 protein.
Length = 367
Score = 26.6 bits (56), Expect = 3.3
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = -3
Query: 253 SCGVGAGNLTRYSISIVSSVDTPFSCKCSDSDEHNSSPHTRKSNSMAFSTVGAVSFNNAL 74
S G+ + +S + +S +P + S S SP T + NS+ F T ++ N L
Sbjct: 18 SMSTGSADSGVFSSGVHAS--SPSHSQGSSSQSGPPSP-TTQLNSLLFETANLIAVNEQL 74
Query: 73 IKELSSDDSI 44
KE++ + I
Sbjct: 75 RKEIAENKQI 84
>Z50795-1|CAA90662.1| 502|Caenorhabditis elegans Hypothetical
protein R166.1 protein.
Length = 502
Score = 26.2 bits (55), Expect = 4.4
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -3
Query: 214 ISIVSSVDTPFSCKCSDSDEHNSSPHTRKSNSMAFSTVGAVSFNNALIKELSSD 53
+S +SSV S +D +SSP + + + S A F+ L++ L+SD
Sbjct: 125 LSQLSSVAEKVSTPSEAADTSSSSPSLNLNTTSSNSVPLAFKFSTPLLESLASD 178
>L25598-8|AAY86212.1| 185|Caenorhabditis elegans Hypothetical
protein C06G4.6 protein.
Length = 185
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -3
Query: 250 CGVGAGNLTRYSISIVSSVDTP-FSCKCSDSDEHNSSPHTRKSNSMAFSTVGAVSFN 83
CG GAG + + S+V++ + P + C C +N R+++ + + ++N
Sbjct: 84 CGEGAGFVNQQGCSMVNTPNGPCYFCCCKGGSCNNPQIFAREASKLPINQQQMQTYN 140
>Z80215-1|CAB02268.2| 282|Caenorhabditis elegans Hypothetical
protein C36B1.3 protein.
Length = 282
Score = 25.8 bits (54), Expect = 5.8
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 24 PYAIQSNIESSEL-NSLINALLKETAPTVEKAIEFDFL 134
PYA Q NIE +EL N +I +L +T +V ++ F+
Sbjct: 2 PYANQPNIEVTELTNDIIKFVLWDTDLSVANSLRRVFM 39
>Z78013-2|CAB01424.1| 453|Caenorhabditis elegans Hypothetical
protein F15B9.6 protein.
Length = 453
Score = 25.8 bits (54), Expect = 5.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 139 VGNCCARHYQNICKRKVYQL 198
+ NCCA+HY ++ Y L
Sbjct: 211 INNCCAKHYNCYMNQRGYNL 230
>Z83319-1|CAB05908.1| 322|Caenorhabditis elegans Hypothetical
protein T02D1.3 protein.
Length = 322
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = -2
Query: 248 WCWCRKPH---QILYFYSIFS*YTFLL 177
WC +KP+ +I++F+SI+ YT L
Sbjct: 100 WCASQKPNHFLKIIFFFSIYFNYTAFL 126
>Z81492-6|CAB04034.1| 416|Caenorhabditis elegans Hypothetical
protein E03H4.10 protein.
Length = 416
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 106 LKRPLNSTFWYVGNCCARHYQNICKR 183
+ P+ S FW+ N C R + ICKR
Sbjct: 257 ISSPIPSGFWFSTN-CTRPAKYICKR 281
>Z75713-3|CAB54301.1| 419|Caenorhabditis elegans Hypothetical
protein T01G9.2b protein.
Length = 419
Score = 25.4 bits (53), Expect = 7.6
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 199 SVDTPFSCKCSDS 161
SVDTPFSC C +
Sbjct: 201 SVDTPFSCYCGQN 213
>Z75713-2|CAB00051.2| 422|Caenorhabditis elegans Hypothetical
protein T01G9.2a protein.
Length = 422
Score = 25.4 bits (53), Expect = 7.6
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 199 SVDTPFSCKCSDS 161
SVDTPFSC C +
Sbjct: 204 SVDTPFSCYCGQN 216
>X51321-1|CAA35704.1| 422|Caenorhabditis elegans hypothetical
protein protein.
Length = 422
Score = 25.4 bits (53), Expect = 7.6
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 199 SVDTPFSCKCSDS 161
SVDTPFSC C +
Sbjct: 204 SVDTPFSCYCGQN 216
>U40952-2|AAA81737.1| 818|Caenorhabditis elegans Hypothetical
protein C03B1.7 protein.
Length = 818
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 202 SSVDTPFSCKCSDSDEHNSSPHTRKSNSMA 113
S D P S +C+D SP T S+ MA
Sbjct: 196 SKKDEPISVECTDETSSRLSPATDISHEMA 225
>U21317-5|AAA62526.2| 895|Caenorhabditis elegans Hypothetical
protein B0495.7 protein.
Length = 895
Score = 25.4 bits (53), Expect = 7.6
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -1
Query: 288 GQLIPNHHASNNPVVLVQETSPDTLFL*YLQLIHL 184
G ++ +H+A NN + V+ DT+ L + ++ L
Sbjct: 469 GAIVHSHYADNNRIRNVEMVQYDTILLSFASILFL 503
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,532,710
Number of Sequences: 27780
Number of extensions: 149661
Number of successful extensions: 513
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -