Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_E13
(432 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 177 4e-46
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 97 1e-21
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 96 2e-21
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 87 1e-18
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 78 5e-16
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 75 4e-15
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 62 5e-11
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 58 8e-10
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 56 2e-09
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 46 2e-06
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 45 4e-06
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 31 0.076
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 29 0.23
SPBC17G9.03c |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr... 27 1.6
SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit ... 25 3.8
SPAC22A12.11 |dak1||dihydroxyacetone kinase Dak1|Schizosaccharom... 25 5.0
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 25 5.0
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 25 6.6
SPBC1711.12 |||serine peptidase |Schizosaccharomyces pombe|chr 2... 25 6.6
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 25 6.6
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 25 6.6
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 24 8.7
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 177 bits (432), Expect = 4e-46
Identities = 89/147 (60%), Positives = 112/147 (76%), Gaps = 5/147 (3%)
Frame = +2
Query: 5 EGYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRH 184
E YRAITSAYYRGAVGAL+VYDI K S++NV RWL+ELR+HAD NI+IMLVGNK+DL H
Sbjct: 70 ERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLH 129
Query: 185 LRSIPTEEAKAFAEQNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEGDVI 364
LR++ TEEA+AFA +N LSFIETSA+D++NVE AFQ +LTEI+RIVS R + +G +
Sbjct: 130 LRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDDG--V 187
Query: 365 RPDA-EPAYVRPSQADSVRK----QCC 430
P A + + P+ D +K QCC
Sbjct: 188 HPTAGQTLNIAPTMNDLNKKKSSSQCC 214
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 96.7 bits (230), Expect = 1e-21
Identities = 42/102 (41%), Positives = 64/102 (62%)
Frame = +2
Query: 5 EGYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRH 184
E +R IT+AYYRGA+G LL+YD+ S++NV W + HA +N+ +L+GNK D
Sbjct: 69 ERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCED 128
Query: 185 LRSIPTEEAKAFAEQNGLSFIETSALDSTNVEPAFQNILTEI 310
R + E+ +A A++ G+ F+E SA + NV+ AF + EI
Sbjct: 129 QRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 96.3 bits (229), Expect = 2e-21
Identities = 46/102 (45%), Positives = 68/102 (66%)
Frame = +2
Query: 5 EGYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRH 184
E +R ITS+YYRGA G ++VYD+ S+ NV++WL+E+ +A + + +LVGNKSD+
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVD 127
Query: 185 LRSIPTEEAKAFAEQNGLSFIETSALDSTNVEPAFQNILTEI 310
+ + AK FA+ + F+ETSA DSTNVE AF + +I
Sbjct: 128 KKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQI 169
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 87.0 bits (206), Expect = 1e-18
Identities = 46/137 (33%), Positives = 77/137 (56%), Gaps = 1/137 (0%)
Frame = +2
Query: 5 EGYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRH 184
E +R++ YYRGA GA+LVYD+ S+E + WL ++R A I ++L G+KSDL++
Sbjct: 73 EKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDLQN 132
Query: 185 LRSIPTEEAKAFAEQNGLSFI-ETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEGDV 361
R + TEEA F + +S ETS+ +NVE F ++++ I + ++ DP + +
Sbjct: 133 QRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTIITRIELGEI-DPQDQSL 191
Query: 362 IRPDAEPAYVRPSQADS 412
+ ++ RP S
Sbjct: 192 GIQYGDLSFRRPVHPSS 208
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 78.2 bits (184), Expect = 5e-16
Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
Frame = +2
Query: 5 EGYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDL-R 181
E Y+++ YYR A A++VYDI + S E + W++EL+ A + I+I L GNK DL +
Sbjct: 75 ERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQ 134
Query: 182 HLRSIPTEEAKAFAEQNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEGDV 361
R++ +A+A+A + L F ETSA + NV F I ++ Q R V
Sbjct: 135 ERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKLPLEDKLNQARGAVNRGV 194
Query: 362 IRPDAEPAYVRPS 400
+A PA +PS
Sbjct: 195 NLSEARPA-AQPS 206
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 75.4 bits (177), Expect = 4e-15
Identities = 35/98 (35%), Positives = 60/98 (61%)
Frame = +2
Query: 5 EGYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRH 184
E +R++ +Y R + A++VYDI H S+ N E+W+ ++R +++I+LVGNK+DL
Sbjct: 71 ERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLAD 130
Query: 185 LRSIPTEEAKAFAEQNGLSFIETSALDSTNVEPAFQNI 298
R + EE + A++ + +ETSA NV+ F+ I
Sbjct: 131 KRQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKI 168
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 61.7 bits (143), Expect = 5e-11
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Frame = +2
Query: 11 YRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQN-ILIMLVGNKSDLRHL 187
Y + S + G G +LVY I S+E V+ ++ +H + I++VGNKSDL
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQ 126
Query: 188 RSIPTEEAKAFAEQNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEGD 358
R++ EE KA A + ++ E SA + NV AF+ I++EI ++Q P GD
Sbjct: 127 RAVTAEEGKALANEWKCAWTEASARHNENVARAFELIISEI-----EKQANPSPPGD 178
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 57.6 bits (133), Expect = 8e-10
Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
Frame = +2
Query: 5 EGYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHAD----QNILIMLVGNKS 172
E ++++ A+YRGA +LVYD+ S+E ++ W E A + +L+GNK
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKV 127
Query: 173 DL-RHLRSIPTEEAKAFAEQNG-LSFIETSALDSTNVEPAFQNI 298
D+ R + +A AF + G + + ETSA ++ NV+ AF+ +
Sbjct: 128 DVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETV 171
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 56.4 bits (130), Expect = 2e-09
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Frame = +2
Query: 5 EGYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNIL-IMLVGNKSDLR 181
E Y A+ Y R G LLVY+I S++ + + +++ D++ ++LV NK DL
Sbjct: 67 EEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLE 126
Query: 182 HLRSIPTEEAKAFAEQNGLSFIETSALDSTNVEPAFQNILTEIYR 316
R + E + A+ ++ETSA NVE AF +++ I R
Sbjct: 127 AERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTIRR 171
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 46.4 bits (105), Expect = 2e-06
Identities = 27/86 (31%), Positives = 47/86 (54%)
Frame = +2
Query: 32 YYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEA 211
Y +G G ++++D+ ++Y+NV W R+L +NI I+L GNK D++ R + +A
Sbjct: 79 YIQGQCG-IIMFDVTSRITYKNVPHWWRDL-VRVCENIPIVLCGNKVDVKE-RKVKA-KA 134
Query: 212 KAFAEQNGLSFIETSALDSTNVEPAF 289
F + L + + SA + N E F
Sbjct: 135 ITFHRKKNLQYYDISAKSNYNFEKPF 160
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 45.2 bits (102), Expect = 4e-06
Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Frame = +2
Query: 5 EGYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQN---ILIMLVGNKSD 175
E ++++ A+YRGA ++VY++ S+++VE W +E Q+ ++VGN+ D
Sbjct: 68 ERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQID 127
Query: 176 L-RHLRSIPTEEAKAFAE-QNGLSFI--ETSALDSTNVEPAFQNI 298
R++ A + + ++G + I E SA ++TNV F+ +
Sbjct: 128 KDASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETV 172
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 31.1 bits (67), Expect = 0.076
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 5 EGYRAITSAYYRGAVGALLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLR 181
E Y + Y + L+ + + S +NV E+W+ E+ H N+ I+LVG K DLR
Sbjct: 65 EDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVL-HFCSNLPILLVGCKVDLR 123
Query: 182 H 184
+
Sbjct: 124 N 124
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 29.5 bits (63), Expect = 0.23
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +2
Query: 218 FAEQNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRD 343
F GL F+ SA DS + A Q E++RI+S R+MRD
Sbjct: 86 FTGTKGLIFVVDSA-DSNRISEARQ----ELHRIISDREMRD 122
>SPBC17G9.03c |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 591
Score = 26.6 bits (56), Expect = 1.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 128 GHVTHATISRRFHKTDASLCRRLEA 54
GH + ++H++DA LC R EA
Sbjct: 468 GHPQMMSPLAKYHRSDAGLCERFEA 492
>SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit
Bdp1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 507
Score = 25.4 bits (53), Expect = 3.8
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 179 RHLRSIPTEEAKAFAEQNGLSFIETSALDSTNVEPAFQNIL-TE-IYRIVSQ 328
RH R E + + E+N LS TSA +P N + TE Y+ +SQ
Sbjct: 331 RHERDFVPAEEREYVEENSLSRRVTSATWGNRQKPEKWNAMDTEKFYKALSQ 382
>SPAC22A12.11 |dak1||dihydroxyacetone kinase
Dak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 25.0 bits (52), Expect = 5.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 109 PSLDVFIRQMLRYVVD*KRSDRTAVVSRRDRPIPLV 2
PS+D I QML+ ++D DR V D + L+
Sbjct: 233 PSIDDLIAQMLKQMLDQSDKDRAYVKIEGDDEVVLL 268
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 25.0 bits (52), Expect = 5.0
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +2
Query: 20 ITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIP 199
I+ +YR +LV I H + N ER L++ N+L+ N+S +R R I
Sbjct: 595 ISVLFYRHKCFPVLV--IVPHATVANWERELKKWAPFLQINVLVGSEKNRSLVRDYRLIN 652
Query: 200 TEEAK 214
++ K
Sbjct: 653 QKDPK 657
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 24.6 bits (51), Expect = 6.6
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 191 SIPTEEAKA-FAEQNGLSFIETSALDSTNVE 280
S P +E KA F +QN + +T AL STN E
Sbjct: 253 SEPEKELKATFNQQNQDLYNQTEALKSTNEE 283
>SPBC1711.12 |||serine peptidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 683
Score = 24.6 bits (51), Expect = 6.6
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +2
Query: 5 EGYRAITSAYYRGAVGALLVYDIAKH--LSYENVERWLREL 121
EG A Y+G LLV++ H + +N RW +E+
Sbjct: 624 EGIAAFNVLQYKGIPSRLLVFEDENHWVIKPDNSLRWHKEV 664
>SPBC3F6.05 |rga1||GTPase activating protein
Rga1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1150
Score = 24.6 bits (51), Expect = 6.6
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 170 SDLRHLRSIPTEEAKAFAEQNGLSFIETSALDSTNV 277
+DLRHL+S +A + Q+ + ETS L S NV
Sbjct: 627 NDLRHLKSSRNRKATSNETQSSSNSTETSKL-SKNV 661
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 24.6 bits (51), Expect = 6.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 110 TISRRFHKTDASLCRRLEALRPH 42
T+S+R + +SL +LEA +PH
Sbjct: 637 TVSQRHRRQLSSLMHQLEATQPH 659
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 24.2 bits (50), Expect = 8.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 269 TNVEPAFQNILTEIYRIVSQRQMRDPPEGDVI 364
TN+E A +L+ + ++ +RQ+ P G+ I
Sbjct: 226 TNIEHAPSEVLSVLLPLLEKRQLVIPSRGETI 257
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,571,917
Number of Sequences: 5004
Number of extensions: 28147
Number of successful extensions: 119
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 154067960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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