Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_E13
         (432 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            88   1e-19
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    25   1.5  
AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    24   2.7  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 88.2 bits (209), Expect = 1e-19
 Identities = 43/102 (42%), Positives = 62/102 (60%)
 Frame = +2

Query: 5   EGYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRH 184
           E Y ++   YYRGA  A++VYDI    S+   + W++EL+  A  NI+I L GNK+DL +
Sbjct: 84  ERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKADLAN 143

Query: 185 LRSIPTEEAKAFAEQNGLSFIETSALDSTNVEPAFQNILTEI 310
            R +  EEAK +A+ N L F+ETSA  + NV   F  I  ++
Sbjct: 144 SRVVDYEEAKQYADDNRLLFMETSAKTAVNVNDIFLAIAKKL 185


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +2

Query: 281 PAFQNILTEIYRIVSQRQMRDPPEGDVIRPDAEPAYVRPSQADSVRKQ 424
           PA + +  E  RI  QRQ+  P + D+   D +  +   +   + +KQ
Sbjct: 299 PAIEELENEC-RIAEQRQLASPTDPDISALDRQARHALKTAIRASKKQ 345


>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 83  LSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSI 196
           +S  ++ERW   + +  DQ  ++   GN+  L   R I
Sbjct: 304 VSVNDLERWRDRIHEAIDQGFVLDKSGNRIMLDEQRGI 341


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,306
Number of Sequences: 2352
Number of extensions: 7485
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)