Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_E13
         (432 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   4.5  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   4.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   4.5  
AB264332-1|BAF44087.1|   58|Apis mellifera ecdysone-induced prot...    21   4.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   4.5  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +2

Query: 335 MRDPPEGDVIRPDAEPAYVRPSQADSVRKQ 424
           ++D  EG+V   ++E  + +   +DSV K+
Sbjct: 294 VKDVEEGNVEETNSEETHQKDGSSDSVIKR 323


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +2

Query: 335 MRDPPEGDVIRPDAEPAYVRPSQADSVRKQ 424
           ++D  EG+V   ++E  + +   +DSV K+
Sbjct: 209 VKDVEEGNVEETNSEETHQKDGSSDSVIKR 238


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +2

Query: 335 MRDPPEGDVIRPDAEPAYVRPSQADSVRKQ 424
           ++D  EG+V   ++E  + +   +DSV K+
Sbjct: 528 VKDVEEGNVEETNSEETHQKDGSSDSVIKR 557


>AB264332-1|BAF44087.1|   58|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 58

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 347 PEGDVIRPDAEP 382
           P GD++ P +EP
Sbjct: 18  PSGDILSPSSEP 29


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 347 PEGDVIRPDAEP 382
           P GD++ P +EP
Sbjct: 18  PSGDILSPSSEP 29


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,273
Number of Sequences: 438
Number of extensions: 2106
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)