Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_E12
         (288 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   3.0  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   3.0  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   3.0  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      20   5.3  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   7.0  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    19   9.2  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    19   9.2  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 221 PCRRMSKCISRVEL 262
           PCR  ++CI+R+ L
Sbjct: 478 PCRCHARCIARLAL 491


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -2

Query: 260 TQHAKYTCSFCGK 222
           T    YTC  CGK
Sbjct: 227 TGEKPYTCDICGK 239


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 221 PCRRMSKCISRVEL 262
           PCR  ++CI+R+ L
Sbjct: 478 PCRCHARCIARLAL 491


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 20.2 bits (40), Expect = 5.3
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -2

Query: 245 YTCSFCGK 222
           YTC  CGK
Sbjct: 372 YTCDVCGK 379



 Score = 19.4 bits (38), Expect = 9.2
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +1

Query: 106 TADLHDEAAVVENTQAPP 159
           T D HDE A      +PP
Sbjct: 183 TPDPHDETAKKPRVLSPP 200


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.8 bits (39), Expect = 7.0
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -2

Query: 254 HAKYTCSFCG 225
           H +YTC  CG
Sbjct: 480 HDEYTCMDCG 489


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = -2

Query: 218 AMKRSCVGIWSCKRCKRTVAGGAWVFSTTAASSCRS 111
           A   +C GI S  + +  +    WV  +   ++ RS
Sbjct: 111 AKNENCSGITSAYKIEIDMCDRLWVLDSGLINNVRS 146


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 118 HDEAAVVENTQAPPATVLLHRLH 186
           +D   V+ N    P TV L +LH
Sbjct: 504 NDTVIVMMNFSKNPVTVNLTKLH 526


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,830
Number of Sequences: 438
Number of extensions: 958
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5744526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)