Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_E11
(459 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132876-13|CAD21665.1| 117|Caenorhabditis elegans Hypothetical... 175 1e-44
AF003136-7|ABE73336.1| 1539|Caenorhabditis elegans Hypothetical ... 29 1.6
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 28 2.8
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 28 3.8
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 28 3.8
Z82265-5|CAB05175.1| 334|Caenorhabditis elegans Hypothetical pr... 27 6.6
U41021-7|AAL02487.1| 680|Caenorhabditis elegans Hypothetical pr... 27 6.6
U41021-6|AAL02488.1| 713|Caenorhabditis elegans Hypothetical pr... 27 6.6
AL110498-7|CAB57909.2| 302|Caenorhabditis elegans Hypothetical ... 27 6.6
AF038609-2|AAK29794.1| 226|Caenorhabditis elegans Hypothetical ... 27 6.6
AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical ... 27 6.6
AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical ... 27 6.6
AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical ... 27 6.6
Z82272-6|CAB05222.1| 1431|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z46934-9|CAD18881.1| 204|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z36719-3|CAA85314.1| 135|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 27 8.7
AC006656-1|AAF39881.1| 592|Caenorhabditis elegans Hypothetical ... 27 8.7
>AL132876-13|CAD21665.1| 117|Caenorhabditis elegans Hypothetical
protein Y105E8A.16 protein.
Length = 117
Score = 175 bits (427), Expect = 1e-44
Identities = 78/101 (77%), Positives = 95/101 (94%)
Frame = +2
Query: 140 HRIRITLTSRNVRSLEKVCSDLINGAKKQKLRVKGPVRMPTKVLRITTRKTPCGEGSKTW 319
HRIR+TLTS+NV+ LEKVC+ LI+GAK + L VKGP+RMPTKVLRITTRKTPCGEGSKTW
Sbjct: 17 HRIRLTLTSQNVKPLEKVCAQLIDGAKNEHLIVKGPIRMPTKVLRITTRKTPCGEGSKTW 76
Query: 320 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 442
DRFQMRIHKR+I+LH+P+E+++QITSI+IEPGV++EVT AD
Sbjct: 77 DRFQMRIHKRLINLHAPAEVLRQITSISIEPGVDIEVTRAD 117
>AF003136-7|ABE73336.1| 1539|Caenorhabditis elegans Hypothetical
protein F28B3.1 protein.
Length = 1539
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 113 KPQAEISPIHRIRITLTSRNVRSLEKVCSDLINGAKK 223
+ +A+ SP HRI +TS+N CS L+ A++
Sbjct: 943 RSRAQSSPDHRILTLVTSKNAEQDTATCSTLLKRAER 979
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
protein H03E18.1 protein.
Length = 1147
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +2
Query: 182 LEKVCSDLINGAKKQKLRVKGPVRMPTKVLRITTRKTPCGE 304
+E V + + G KK+ + K + PTK +T++ P E
Sbjct: 359 VELVTAKTVEGEKKETKKPKSTTKKPTKTAAASTKRPPTTE 399
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 27.9 bits (59), Expect = 3.8
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -2
Query: 311 WNPHRKVFYVL*CGEPWSAFGLDPLHGVFV 222
W + + FY G+PWS+ G P+ G V
Sbjct: 1447 WPGYEEHFYAKNTGKPWSSGGFKPIAGAKV 1476
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 27.9 bits (59), Expect = 3.8
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -2
Query: 311 WNPHRKVFYVL*CGEPWSAFGLDPLHGVFV 222
W + + FY G+PWS+ G P+ G V
Sbjct: 72 WPGYEEHFYAKNTGKPWSSGGFKPIAGAKV 101
>Z82265-5|CAB05175.1| 334|Caenorhabditis elegans Hypothetical
protein F02H6.7 protein.
Length = 334
Score = 27.1 bits (57), Expect = 6.6
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = -2
Query: 140 GSVR-SQP---GASRYPFLTRQRLPCCCDIPVEINNFQIKNCSALNRSP 6
GS R SQP A YP PCC P INN+ ++ N +P
Sbjct: 105 GSTRISQPCGTQACNYPRTNGPGAPCCIGTPKVINNWYHCGSNSQNAAP 153
>U41021-7|AAL02487.1| 680|Caenorhabditis elegans Hypothetical
protein F14D12.1a protein.
Length = 680
Score = 27.1 bits (57), Expect = 6.6
Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = +2
Query: 41 ESCLSRPEYRNNMAAAVVS-GKDIEKPQAEISPIHRIRITLTSRNVRSLEKVCSDLINGA 217
ES S E ++ A + +S K P ++P I S+ +L++ S I+
Sbjct: 550 ESMASSSESLSSDARSKISIKKRSNSPPRTVAPC--ILPKQPSQRTLTLQQQSSSSIDSL 607
Query: 218 KK-QKLRVKGPVRMPTKVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSE 376
Q R VR+PT++L + + G K+ F+ ++ + PS+
Sbjct: 608 NSTQTTRTTSSVRLPTRILVNQSSTSSEGSSGKSQHYFESKVGPKTSSTSHPSD 661
>U41021-6|AAL02488.1| 713|Caenorhabditis elegans Hypothetical
protein F14D12.1b protein.
Length = 713
Score = 27.1 bits (57), Expect = 6.6
Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = +2
Query: 41 ESCLSRPEYRNNMAAAVVS-GKDIEKPQAEISPIHRIRITLTSRNVRSLEKVCSDLINGA 217
ES S E ++ A + +S K P ++P I S+ +L++ S I+
Sbjct: 550 ESMASSSESLSSDARSKISIKKRSNSPPRTVAPC--ILPKQPSQRTLTLQQQSSSSIDSL 607
Query: 218 KK-QKLRVKGPVRMPTKVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSE 376
Q R VR+PT++L + + G K+ F+ ++ + PS+
Sbjct: 608 NSTQTTRTTSSVRLPTRILVNQSSTSSEGSSGKSQHYFESKVGPKTSSTSHPSD 661
>AL110498-7|CAB57909.2| 302|Caenorhabditis elegans Hypothetical
protein Y64G10A.1 protein.
Length = 302
Score = 27.1 bits (57), Expect = 6.6
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2
Query: 80 PCCCDIPVEINNF 42
PCC PVEINNF
Sbjct: 88 PCCNGSPVEINNF 100
>AF038609-2|AAK29794.1| 226|Caenorhabditis elegans Hypothetical
protein C54E4.2a protein.
Length = 226
Score = 27.1 bits (57), Expect = 6.6
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 77 MAAAVVSGKDIEKPQAEISPIH 142
++AA +S +D+EKP + P+H
Sbjct: 14 ISAAYISSEDLEKPSSADKPVH 35
>AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical
protein C54E4.2b protein.
Length = 234
Score = 27.1 bits (57), Expect = 6.6
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 77 MAAAVVSGKDIEKPQAEISPIH 142
++AA +S +D+EKP + P+H
Sbjct: 14 ISAAYISSEDLEKPSSADKPVH 35
>AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical
protein C44E4.1a protein.
Length = 2712
Score = 27.1 bits (57), Expect = 6.6
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 119 QAEISPIHRIRITLTSRNVRSLEKVCSDLINGAK 220
Q+EIS I +IR TL + + K+ SDL G K
Sbjct: 1140 QSEISTIEKIRNTLNGDGYQGMYKLMSDLGLGWK 1173
>AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical
protein C44E4.1c protein.
Length = 2710
Score = 27.1 bits (57), Expect = 6.6
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 119 QAEISPIHRIRITLTSRNVRSLEKVCSDLINGAK 220
Q+EIS I +IR TL + + K+ SDL G K
Sbjct: 1140 QSEISTIEKIRNTLNGDGYQGMYKLMSDLGLGWK 1173
>Z82272-6|CAB05222.1| 1431|Caenorhabditis elegans Hypothetical protein
F55G11.9 protein.
Length = 1431
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 456 SCAYASAMVTSTSTPGSILIEVICFT 379
S Y +A + +T T GS+L+ V C T
Sbjct: 964 SLVYLTASLINTPTKGSLLLYVFCLT 989
>Z46934-9|CAD18881.1| 204|Caenorhabditis elegans Hypothetical
protein ZK1320.11 protein.
Length = 204
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 408 SILIEVICFTISEGECRSITRLWMR 334
S L+EVICF +S + + +WM+
Sbjct: 98 SSLMEVICFGLSSKQAVQVIDIWMK 122
>Z36719-3|CAA85314.1| 135|Caenorhabditis elegans Hypothetical
protein C06C3.7 protein.
Length = 135
Score = 26.6 bits (56), Expect = 8.7
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 206 INGAKKQKLRVKGPVRMPTKVLRITTRKTPCGEGSKTWD-RFQMRIHKRVIDLHSPSEIV 382
I+G K+ R+K M K ++I +TP E K R + RI KR ++H +
Sbjct: 50 IDGQKENPKRIKMSQHMTAKEVKIPLLRTPDEEARKIEKLRREARI-KRSKEVHYDAAEQ 108
Query: 383 KQITSINIEPGVEVE 427
+QI +N E V++E
Sbjct: 109 QQI-MMNYEWTVQME 122
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 286 TCCDAENLGRHSDWTLYT 233
TCCD E G +DW +T
Sbjct: 1195 TCCDPEKTGLWNDWGAWT 1212
>AC006656-1|AAF39881.1| 592|Caenorhabditis elegans Hypothetical
protein H12I13.1 protein.
Length = 592
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 167 RNVRSLEKVC-SDLINGAKKQKLRVKGPVRMPTKVLRITTRKT 292
R+ +S KVC + L GAKK++ + K+L IT KT
Sbjct: 364 RDNKSSNKVCRTSLSGGAKKKRKERNARSEVGDKILGITETKT 406
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,441,620
Number of Sequences: 27780
Number of extensions: 241195
Number of successful extensions: 683
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -