Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_E10
(457 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 164 4e-43
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 164 4e-43
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 1.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 1.2
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 2.1
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 4.8
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 4.8
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 6.3
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 8.4
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 21 8.4
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 21 8.4
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 164 bits (399), Expect = 4e-43
Identities = 75/92 (81%), Positives = 85/92 (92%)
Frame = +2
Query: 182 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIADDQRYKGIVDAF 361
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+++QRYKG++D F
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60
Query: 362 VRIPNEQCLLSFWRGNFANVIRYFPTQALNFA 457
VRIP EQ LS+WRGN ANVIRYFPTQALNFA
Sbjct: 61 VRIPKEQGFLSYWRGNLANVIRYFPTQALNFA 92
Score = 21.4 bits (43), Expect = 4.8
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = +2
Query: 269 PIERVKLLLQVQHVSKQIADDQRYKGIVDAFVRIPNEQCLLSFWRGNFANVIR 427
P + V+ + +Q S + + YK + + I + +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 164 bits (399), Expect = 4e-43
Identities = 75/92 (81%), Positives = 85/92 (92%)
Frame = +2
Query: 182 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIADDQRYKGIVDAF 361
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+++QRYKG++D F
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60
Query: 362 VRIPNEQCLLSFWRGNFANVIRYFPTQALNFA 457
VRIP EQ LS+WRGN ANVIRYFPTQALNFA
Sbjct: 61 VRIPKEQGFLSYWRGNLANVIRYFPTQALNFA 92
Score = 21.4 bits (43), Expect = 4.8
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = +2
Query: 269 PIERVKLLLQVQHVSKQIADDQRYKGIVDAFVRIPNEQCLLSFWRGNFANVIR 427
P + V+ + +Q S + + YK + + I + +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 1.2
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -1
Query: 448 ERLSREVPDDIGEVTTPE 395
ER +RE+PDD+ + P+
Sbjct: 553 ERANRELPDDLRQKVLPD 570
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 1.2
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -1
Query: 448 ERLSREVPDDIGEVTTPE 395
ER +RE+PDD+ + P+
Sbjct: 553 ERANRELPDDLRQKVLPD 570
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.6 bits (46), Expect = 2.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 430 VPDDIGEVTTPE*EQTLLIGNADEGVDDTLV 338
+PD E+T P E+T+ I N E + +T V
Sbjct: 364 IPDK--EITVPSNEETIDINNGAELMQETHV 392
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 4.8
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2
Query: 324 AICLLTCWT 298
A C+L+CWT
Sbjct: 103 ATCVLSCWT 111
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 4.8
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2
Query: 324 AICLLTCWT 298
A C+L+CWT
Sbjct: 156 ATCVLSCWT 164
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.0 bits (42), Expect = 6.3
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 49 DHEITPNLLIKNRGFVFRGFSIPCVPKSFLVRKYPP 156
D ++P I+NR + G S P + K+PP
Sbjct: 374 DLRMSPLPSIRNRSGLVSGSSTPGTGREHDPAKFPP 409
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 20.6 bits (41), Expect = 8.4
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -3
Query: 383 TAHWECGRRR 354
T HW+ GRR+
Sbjct: 267 TNHWDSGRRK 276
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 20.6 bits (41), Expect = 8.4
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = -3
Query: 122 THGMEKPRKTNPRFLIRRFGVIS 54
THG P LIR G +S
Sbjct: 55 THGKGTPTVVKTNILIRSMGPVS 77
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 20.6 bits (41), Expect = 8.4
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 390 SRHCSLGMRTKA 355
SRH +LG+ TKA
Sbjct: 82 SRHTTLGLLTKA 93
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,523
Number of Sequences: 438
Number of extensions: 2640
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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