Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_E09
         (274 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D29642-1|BAA06125.2|  666|Homo sapiens KIAA0053 protein.               29   2.0  
BC039591-1|AAH39591.1|  458|Homo sapiens ARHGAP25 protein protein.     29   2.0  
AC097495-2|AAY15074.1|  558|Homo sapiens unknown protein.              29   2.0  
BC016950-1|AAH16950.1|   75|Homo sapiens KLHL23 protein protein.       28   6.1  
AK131277-1|BAD18454.1|  547|Homo sapiens protein ( Homo sapiens ...    27   8.1  
AK097681-1|BAC05141.1|  455|Homo sapiens protein ( Homo sapiens ...    27   8.1  
AB089940-1|BAD02449.1|  998|Homo sapiens N-acetylgalactosaminylt...    27   8.1  

>D29642-1|BAA06125.2|  666|Homo sapiens KIAA0053 protein.
          Length = 666

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = +1

Query: 136 GQENIYTVMLKETFDIIITPNSSEDSDVYSICSICETRLKD 258
           GQ+N+    L++ FD    P+   D+DV+++ S+ +  L+D
Sbjct: 223 GQDNLVK-QLRDAFDAGERPSFDRDTDVHTVASLLKLYLRD 262


>BC039591-1|AAH39591.1|  458|Homo sapiens ARHGAP25 protein protein.
          Length = 458

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = +1

Query: 136 GQENIYTVMLKETFDIIITPNSSEDSDVYSICSICETRLKD 258
           GQ+N+    L++ FD    P+   D+DV+++ S+ +  L+D
Sbjct: 196 GQDNLVK-QLRDAFDAGERPSFDRDTDVHTVASLLKLYLRD 235


>AC097495-2|AAY15074.1|  558|Homo sapiens unknown protein.
          Length = 558

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = +1

Query: 136 GQENIYTVMLKETFDIIITPNSSEDSDVYSICSICETRLKD 258
           GQ+N+    L++ FD    P+   D+DV+++ S+ +  L+D
Sbjct: 115 GQDNLVK-QLRDAFDAGERPSFDRDTDVHTVASLLKLYLRD 154


>BC016950-1|AAH16950.1|   75|Homo sapiens KLHL23 protein protein.
          Length = 75

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -2

Query: 258 IFETSLTYTTYAVYITIFTRVWSYNYI---KCFFQHYSVYIFLAV 133
           +F    +Y    VYI ++T V  Y Y+    C   H  VYI++ V
Sbjct: 11  VFICMRSYIRAYVYIYVYTYVCMYTYMCIHTCVCIHICVYIYMCV 55


>AK131277-1|BAD18454.1|  547|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16224 fis, clone CTONG3009287. ).
          Length = 547

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 142 ENIYTVMLKETFDIIITPNSSEDSDV 219
           EN++ V     F+I+IT  SSED DV
Sbjct: 358 ENLFQVTGDPHFNIVITDYSSEDMDV 383


>AK097681-1|BAC05141.1|  455|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40362 fis, clone TESTI2034506. ).
          Length = 455

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 142 ENIYTVMLKETFDIIITPNSSEDSDV 219
           EN++ V     F+I+IT  SSED DV
Sbjct: 266 ENLFQVTGDPHFNIVITDYSSEDMDV 291


>AB089940-1|BAD02449.1|  998|Homo sapiens
           N-acetylgalactosaminyltransferase protein.
          Length = 998

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 142 ENIYTVMLKETFDIIITPNSSEDSDV 219
           EN++ V     F+I+IT  SSED DV
Sbjct: 809 ENLFQVTGDPHFNIVITDYSSEDMDV 834


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,197,970
Number of Sequences: 237096
Number of extensions: 554048
Number of successful extensions: 1151
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 76,859,062
effective HSP length: 68
effective length of database: 60,736,534
effective search space used: 1336203748
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)