SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_E09
         (274 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095055-1|AAM11383.1| 1349|Drosophila melanogaster LD43045p pro...    29   0.67 
AE014297-3749|AAF56430.2| 2695|Drosophila melanogaster CG11856-P...    29   0.67 
BT024439-1|ABC86501.1|  385|Drosophila melanogaster IP01996p pro...    28   1.5  
AE014298-1308|AAF46468.3|  385|Drosophila melanogaster CG15371-P...    28   1.5  
AE014298-2337|AAF48569.1|  294|Drosophila melanogaster CG12507-P...    26   6.3  
AY118640-1|AAM50009.1|   65|Drosophila melanogaster SD02447p pro...    26   8.3  
AE014298-2607|AAF48760.1|  607|Drosophila melanogaster CG15816-P...    26   8.3  

>AY095055-1|AAM11383.1| 1349|Drosophila melanogaster LD43045p
           protein.
          Length = 1349

 Score = 29.5 bits (63), Expect = 0.67
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 109 NLAAPYTNDGQENIYTVMLKETFDIIITPNSS 204
           N  A YTN+GQ+ +Y +  +E  D  + P  S
Sbjct: 406 NCQACYTNNGQDQLYCLACQEPKDATVPPKQS 437


>AE014297-3749|AAF56430.2| 2695|Drosophila melanogaster CG11856-PA
            protein.
          Length = 2695

 Score = 29.5 bits (63), Expect = 0.67
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 109  NLAAPYTNDGQENIYTVMLKETFDIIITPNSS 204
            N  A YTN+GQ+ +Y +  +E  D  + P  S
Sbjct: 1775 NCQACYTNNGQDQLYCLACQEPKDATVPPKQS 1806


>BT024439-1|ABC86501.1|  385|Drosophila melanogaster IP01996p
           protein.
          Length = 385

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 11/42 (26%), Positives = 24/42 (57%)
 Frame = -2

Query: 273 FELCSIFETSLTYTTYAVYITIFTRVWSYNYIKCFFQHYSVY 148
           +++   F+ +  ++  AV +TI  R+     + C+F +YS+Y
Sbjct: 237 YDMLKCFQGAFNFSILAVLLTINIRI----AVDCYFMYYSIY 274


>AE014298-1308|AAF46468.3|  385|Drosophila melanogaster CG15371-PA
           protein.
          Length = 385

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 11/42 (26%), Positives = 24/42 (57%)
 Frame = -2

Query: 273 FELCSIFETSLTYTTYAVYITIFTRVWSYNYIKCFFQHYSVY 148
           +++   F+ +  ++  AV +TI  R+     + C+F +YS+Y
Sbjct: 237 YDMLKCFQGAFNFSILAVLLTINIRI----AVDCYFMYYSIY 274


>AE014298-2337|AAF48569.1|  294|Drosophila melanogaster CG12507-PA
           protein.
          Length = 294

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 43  YDDGNLEYKHSMPMLSRRRNFKNLAAPYTND 135
           YD G+ E ++S P    ++  KN+  P  N+
Sbjct: 256 YDSGSPEDRNSAPYKLNKKKIKNIQRPLANN 286


>AY118640-1|AAM50009.1|   65|Drosophila melanogaster SD02447p
           protein.
          Length = 65

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 231 TYAVYITIFTRVWSYNYIKCFFQHY 157
           TYA  +  +T   ++ +I  FF+HY
Sbjct: 26  TYANLVATYTNTQAHAHISIFFRHY 50


>AE014298-2607|AAF48760.1|  607|Drosophila melanogaster CG15816-PA
           protein.
          Length = 607

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 73  SMPMLSRRRNFKNLAAPYTNDGQEN 147
           SMP +   +N  N AAP T+  +EN
Sbjct: 205 SMPSMPNGQNIPNAAAPRTHFNEEN 229


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,694,839
Number of Sequences: 53049
Number of extensions: 175595
Number of successful extensions: 432
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 432
length of database: 24,988,368
effective HSP length: 69
effective length of database: 21,327,987
effective search space used: 447887727
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -