Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_E09
(274 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93380-3|CAB07600.1| 339|Caenorhabditis elegans Hypothetical pr... 31 0.15
Z70208-11|CAA94144.1| 598|Caenorhabditis elegans Hypothetical p... 27 1.4
Z72512-5|CAA96667.2| 351|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z69384-9|CAD89747.1| 497|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z69383-14|CAA93405.3| 497|Caenorhabditis elegans Hypothetical p... 27 2.4
AF077536-2|AAK31410.2| 527|Caenorhabditis elegans Hypothetical ... 27 2.4
AC025726-29|AAK73931.2| 1098|Caenorhabditis elegans Hypothetical... 27 2.4
U49947-7|AAA93425.2| 382|Caenorhabditis elegans Hypothetical pr... 26 4.2
AF125971-4|AAD14766.1| 381|Caenorhabditis elegans Hypothetical ... 26 4.2
AF125971-2|AAN73291.1| 458|Caenorhabditis elegans Hypothetical ... 26 4.2
AC024798-3|AAP86612.1| 361|Caenorhabditis elegans Hypothetical ... 26 4.2
AC024798-2|AAK29923.1| 352|Caenorhabditis elegans Hypothetical ... 26 4.2
Z82264-4|CAB05162.1| 491|Caenorhabditis elegans Hypothetical pr... 25 5.5
AC006747-7|AAF60511.1| 331|Caenorhabditis elegans Hypothetical ... 25 5.5
AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ... 25 5.5
Z93380-1|CAB07598.2| 337|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z72508-8|CAA96640.2| 366|Caenorhabditis elegans Hypothetical pr... 25 7.3
U88184-7|AAK31516.1| 576|Caenorhabditis elegans Hypothetical pr... 25 7.3
AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical ... 25 7.3
AF003146-4|AAB54200.2| 650|Caenorhabditis elegans Hypothetical ... 25 7.3
Z82284-2|CAB05290.1| 402|Caenorhabditis elegans Hypothetical pr... 25 9.7
AF068709-10|AAC19252.2| 345|Caenorhabditis elegans Seven tm rec... 25 9.7
>Z93380-3|CAB07600.1| 339|Caenorhabditis elegans Hypothetical
protein F28C12.4 protein.
Length = 339
Score = 30.7 bits (66), Expect = 0.15
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 237 YTTYAVYITIFTRVWSYNYIKCFFQH-YSVYIFLAVVSI 124
++TY+V+ F R+ SY + KC+ + Y V I L ++ +
Sbjct: 122 FSTYSVFSLTFDRLISYFFPKCYISYPYQVSISLLIIQL 160
>Z70208-11|CAA94144.1| 598|Caenorhabditis elegans Hypothetical
protein F54B11.11 protein.
Length = 598
Score = 27.5 bits (58), Expect = 1.4
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 40 FYDDGNLEYKHSMPMLSRRRNFKNLAAPYTNDGQENIYTVMLKETFDIIITPNSSEDSDV 219
FYD+G + Y + + +++ +FK+ A NDG E + ++ ITP ++ S V
Sbjct: 208 FYDNGRMYYANWITIVNFYDDFKSDAYIIANDGPE------ITSSYQFFITPPNNFTSKV 261
>Z72512-5|CAA96667.2| 351|Caenorhabditis elegans Hypothetical
protein R07B5.7 protein.
Length = 351
Score = 26.6 bits (56), Expect = 2.4
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2
Query: 243 LTYTTYAVYITIFTRVWSYNY 181
L Y TYA++I ++ +V +Y Y
Sbjct: 270 LPYLTYAIFIVLYLKVPAYTY 290
>Z69384-9|CAD89747.1| 497|Caenorhabditis elegans Hypothetical
protein F13E9.1 protein.
Length = 497
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -2
Query: 237 YTTYAVYITIFTRVWSYNYIKCFFQHYSVYIFL 139
YT Y + IT+ T W+ F Y V+ FL
Sbjct: 32 YTVYRIQITVDTYTWTVERRYSDFDAYDVHRFL 64
>Z69383-14|CAA93405.3| 497|Caenorhabditis elegans Hypothetical
protein F13E9.1 protein.
Length = 497
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -2
Query: 237 YTTYAVYITIFTRVWSYNYIKCFFQHYSVYIFL 139
YT Y + IT+ T W+ F Y V+ FL
Sbjct: 32 YTVYRIQITVDTYTWTVERRYSDFDAYDVHRFL 64
>AF077536-2|AAK31410.2| 527|Caenorhabditis elegans Hypothetical
protein C16A11.4a protein.
Length = 527
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Frame = +1
Query: 31 RNIFYDDGNLEY--KHSM---PMLSRRRNFKNLAAPYTNDGQEN 147
R FY NLE+ KH + P+++RR++ ++ + + N G+E+
Sbjct: 209 RITFYKSKNLEFRGKHRVGRFPLVNRRKSAESTSQQHGNSGEED 252
>AC025726-29|AAK73931.2| 1098|Caenorhabditis elegans Hypothetical
protein Y71G12B.5 protein.
Length = 1098
Score = 26.6 bits (56), Expect = 2.4
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +1
Query: 58 LEYKHSMPMLSRRRNF----KNLAAPYTNDGQENIYTVMLKETFDIIITPNSSEDSDVYS 225
++YK + + R N K AAP D + LKE FD+ +T N E D
Sbjct: 944 VDYKRGVVLHGREPNCEKSRKFFAAPEDADKVAEDFLKSLKEAFDLRLTRNIEELIDESF 1003
Query: 226 ICSICE 243
+ CE
Sbjct: 1004 VFEGCE 1009
>U49947-7|AAA93425.2| 382|Caenorhabditis elegans Hypothetical
protein C30G4.6 protein.
Length = 382
Score = 25.8 bits (54), Expect = 4.2
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Frame = +1
Query: 22 NFIRNIFYDDGNLEYKHSMPMLSRRRNFKNLAAPY---TNDGQENIYTVMLKETFD--II 186
N +I + ++ + +P LSR R+ K+ AP+ N ++T M E + +
Sbjct: 151 NIYGSITIQNSSIRNLNFLPNLSRIRSIKDKVAPFIAVNNSKLFELFTTMQFEGAESGVA 210
Query: 187 ITPNSSEDSDVYSI-CSICETR 249
+T ++E V I CS TR
Sbjct: 211 VTVENNESLMVPDILCSFFRTR 232
>AF125971-4|AAD14766.1| 381|Caenorhabditis elegans Hypothetical
protein Y4C6B.3 protein.
Length = 381
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 215 SLSSLEFGVIIISNVSFNITVYIFSWPSLV 126
+L + +F I+IS + F + +FS P+LV
Sbjct: 324 TLHARQFSSIVISAIQFTKCIALFSGPALV 353
>AF125971-2|AAN73291.1| 458|Caenorhabditis elegans Hypothetical
protein Y4C6B.4a protein.
Length = 458
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 215 SLSSLEFGVIIISNVSFNITVYIFSWPSLV 126
+L + +F I+IS + F + +FS P+LV
Sbjct: 369 TLHARQFSSIVISAIQFTKCISLFSGPALV 398
>AC024798-3|AAP86612.1| 361|Caenorhabditis elegans Hypothetical
protein Y48G9A.9b protein.
Length = 361
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 169 ETFDIIITPNSSEDSDVYSICSICETRLKD 258
ET+ I N E SD + IC++ T + D
Sbjct: 190 ETYGCIRVTNMGESSDEFEICNLAVTFVPD 219
>AC024798-2|AAK29923.1| 352|Caenorhabditis elegans Hypothetical
protein Y48G9A.9a protein.
Length = 352
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 169 ETFDIIITPNSSEDSDVYSICSICETRLKD 258
ET+ I N E SD + IC++ T + D
Sbjct: 181 ETYGCIRVTNMGESSDEFEICNLAVTFVPD 210
>Z82264-4|CAB05162.1| 491|Caenorhabditis elegans Hypothetical
protein C49C3.9 protein.
Length = 491
Score = 25.4 bits (53), Expect = 5.5
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Frame = +1
Query: 7 GLLF*NFIRNIFYDDGNLEYKHSMPMLSRRRNFKN-----LAAPYTNDGQENIYTVMLKE 171
G+L N + N F DG + H + +L + F++ A +N G I+T+ + +
Sbjct: 185 GVLVYNLLSNFFIYDGGVYKGHLLDVLVAQNMFQSCTGSQFAIVNSNYGSIGIFTISISQ 244
Query: 172 TFD-----IIITPN 198
D III P+
Sbjct: 245 VKDWSASQIIIVPS 258
>AC006747-7|AAF60511.1| 331|Caenorhabditis elegans Hypothetical
protein Y39A3A.4 protein.
Length = 331
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 169 ETFDIIITPNSSEDSDVYSICSICETRLKD 258
ET+ I N SE S+ + IC++ T + D
Sbjct: 173 ETYGCIRVTNFSESSEEFEICNLAVTFVPD 202
>AC006679-2|AAK84465.2| 425|Caenorhabditis elegans Ligand-gated ion
channel protein 12 protein.
Length = 425
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = -2
Query: 270 ELCSIFETSLTYTTYAVYITIFTRVWSYNYIKCFFQHYSVYIFL 139
+LC++ S TY ++A+ + + N +KC F S+ ++
Sbjct: 164 QLCALQFGSWTYQSHALSFNVLEASVNENNVKCNFPPLSIQSYI 207
>Z93380-1|CAB07598.2| 337|Caenorhabditis elegans Hypothetical
protein F28C12.1 protein.
Length = 337
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 237 YTTYAVYITIFTRVWSYNYIKCFFQH-YSVYIFLAVVSI 124
++TYAV+ F R+ S+ K +F H Y V L ++ +
Sbjct: 120 FSTYAVFSLTFDRLVSHYKPKYYFSHQYYVSNSLLIIQL 158
>Z72508-8|CAA96640.2| 366|Caenorhabditis elegans Hypothetical
protein F28H7.9 protein.
Length = 366
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = -3
Query: 206 SLEFGVIIISNVSFNI--TVYIFSWPSLV 126
S+ ++I+SNVSFNI T+Y P +V
Sbjct: 255 SMNDKMVIVSNVSFNILCTIYAAVTPIIV 283
>U88184-7|AAK31516.1| 576|Caenorhabditis elegans Hypothetical
protein F36H5.5 protein.
Length = 576
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -2
Query: 213 TIFTRVWSYNYIKCFFQHYSVYIFLAVVSIR 121
T T ++Y +IK Y Y+FLA+ +++
Sbjct: 349 TFKTFQFAYKFIKDLLLSYHTYLFLAIEAVQ 379
>AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical
protein F14F9.4 protein.
Length = 918
Score = 25.0 bits (52), Expect = 7.3
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +1
Query: 97 RNFKNLAAPYTNDGQENIYTVMLKETFDIIITPNSSEDSDVYSICSICETRLKDA 261
RN KN + ++N+ + + KE D I D+ ++ ET++KDA
Sbjct: 862 RNIKNTLESMM-ENRKNLLSSLEKEDLDAIKECAKKLRRDIDTVVQAVETKVKDA 915
>AF003146-4|AAB54200.2| 650|Caenorhabditis elegans Hypothetical
protein F56F4.3 protein.
Length = 650
Score = 25.0 bits (52), Expect = 7.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 183 YIKCFFQHYSVYIFL 139
+I+CFF H VY F+
Sbjct: 77 FIECFFNHGGVYFFV 91
>Z82284-2|CAB05290.1| 402|Caenorhabditis elegans Hypothetical
protein T27E7.3 protein.
Length = 402
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 264 CSIFETSLTYTTYAVYITIFTRVWSYNYIKCFFQHYS 154
C +F T + Y T+FT+V+ + + F+H S
Sbjct: 165 CGVFWT--VWGVYIYIATLFTQVYQFLLARYIFEHSS 199
>AF068709-10|AAC19252.2| 345|Caenorhabditis elegans Seven tm
receptor protein 33 protein.
Length = 345
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 225 AVYITIFTRVWSYNYIKCFFQ 163
+VY +F +SYNYI+ F+
Sbjct: 151 SVYFCLFPDTYSYNYIRTEFK 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,765,122
Number of Sequences: 27780
Number of extensions: 100219
Number of successful extensions: 313
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 313
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 227290938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -