Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_E09
(274 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g58820.1 68418.m07370 subtilase family protein contains simil... 27 1.8
At4g12780.1 68417.m02005 auxilin-related low similarity to SP|Q2... 27 1.8
At4g12770.1 68417.m02004 auxilin-related low similarity to SP|Q2... 27 1.8
At4g22960.1 68417.m03314 hypothetical protein contains Pfam doma... 26 3.1
At3g42410.1 68416.m04385 replication protein-related weak simila... 26 3.1
At5g10120.1 68418.m01172 ethylene insensitive 3 family protein c... 26 4.1
At1g72840.1 68414.m08425 disease resistance protein (TIR-NBS-LRR... 25 5.4
At5g59120.1 68418.m07409 subtilase family protein contains simil... 25 7.2
At5g55770.1 68418.m06951 DC1 domain-containing protein contains ... 25 9.5
At5g28480.1 68418.m03462 hypothetical protein 25 9.5
At4g19110.2 68417.m02820 protein kinase, putative contains prote... 25 9.5
At4g19110.1 68417.m02819 protein kinase, putative contains prote... 25 9.5
At3g60330.1 68416.m06743 ATPase, plasma membrane-type, putative ... 25 9.5
At2g24520.1 68415.m02929 ATPase, plasma membrane-type, putative ... 25 9.5
At2g16170.1 68415.m01853 expressed protein similar to At2g06640,... 25 9.5
At2g12110.1 68415.m01302 expressed protein similar to At2g16170,... 25 9.5
At2g04270.4 68415.m00419 glycoside hydrolase starch-binding doma... 25 9.5
At2g04270.3 68415.m00418 glycoside hydrolase starch-binding doma... 25 9.5
At2g04270.2 68415.m00417 glycoside hydrolase starch-binding doma... 25 9.5
At2g04270.1 68415.m00416 glycoside hydrolase starch-binding doma... 25 9.5
At1g04570.1 68414.m00450 integral membrane transporter family pr... 25 9.5
>At5g58820.1 68418.m07370 subtilase family protein contains
similarity to prepro-cucumisin GI:807698 from [Cucumis
melo]
Length = 703
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 85 LSRRRNFKNLAAPYTNDGQENIYTVMLKETFDIIITPNSSEDSDV 219
L R N+ +++A DG + +TV K T + TPNS+ S +
Sbjct: 598 LPRNLNYPSMSAKI--DGYNSSFTVTFKRTVTNLGTPNSTYKSKI 640
>At4g12780.1 68417.m02005 auxilin-related low similarity to
SP|Q27974 Auxilin {Bos taurus}
Length = 485
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 193 PNSSEDSDVYSICSICETRLKDA 261
P+S EDSDV+S + +KDA
Sbjct: 22 PSSGEDSDVFSTAAASAAAMKDA 44
>At4g12770.1 68417.m02004 auxilin-related low similarity to
SP|Q27974 Auxilin {Bos taurus}
Length = 909
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 193 PNSSEDSDVYSICSICETRLKDA 261
P+S EDSDV+S + +KDA
Sbjct: 439 PSSGEDSDVFSTAAASAAAMKDA 461
>At4g22960.1 68417.m03314 hypothetical protein contains Pfam domain
PF04424: Protein of unknown function (DUF544)
Length = 487
Score = 26.2 bits (55), Expect = 3.1
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 127 TNDGQENIYTVMLKETFDIIITPNSSEDSDVYSICSICETRLK 255
TN G+E T + ETF + T NSS+ +DV + S+ +T L+
Sbjct: 279 TNVGEEVSSTELGDETFGNVETENSSKMTDV--LISVEKTNLE 319
>At3g42410.1 68416.m04385 replication protein-related weak
similarity to Replication Protein A 70 kDa DNA-binding
subunit (RP-A) (RF-A) (Replication factor-A protein 1)
(Single-stranded DNA-binding protein) (DMRPA1)
(GI:2498844)(SP:Q24492) [Drosophila melanogaster]
Length = 474
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 116 ARFLKFLLRDNIGIECLYSRFPSS*NMFLIKFQK 15
AR++KF +RDN+ C+ + +FLIKF +
Sbjct: 164 ARYVKFTIRDNLITTCVAK--GRACELFLIKFYR 195
>At5g10120.1 68418.m01172 ethylene insensitive 3 family protein
contains Pfam profile: PF04873 ethylene insensitive 3
Length = 471
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 139 QENIYTVMLKETFDIIITPNSSEDSDVYSICS 234
Q YT L ET I+T ++SED D Y++ S
Sbjct: 348 QSGEYTSSLLETVPSIVTNSTSED-DYYNVSS 378
>At1g72840.1 68414.m08425 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1183
Score = 25.4 bits (53), Expect = 5.4
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -3
Query: 245 VSHILHMLYTSLSSLEFGVI--IISNVSFNITVYI 147
+SH + Y LSSLEF I I +SF T+Y+
Sbjct: 935 LSHFTKLTYLDLSSLEFRRIPTSIRELSFMRTLYL 969
>At5g59120.1 68418.m07409 subtilase family protein contains
similarity to prepro-cucumisin GI:807698 from [Cucumis
melo]; non-consensus AA acceptor site at exon 6
Length = 732
Score = 25.0 bits (52), Expect = 7.2
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 82 MLSRRRNFKNLAAPYTNDGQENIYTVMLKETFDIIITPNSSEDSDV 219
+L R N+ +++A + G +TV T + TPNS+ S V
Sbjct: 622 ILPRNLNYPSMSAKLSGSG--TTFTVTFNRTLTNVGTPNSTYTSKV 665
>At5g55770.1 68418.m06951 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 695
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/34 (29%), Positives = 14/34 (41%)
Frame = +1
Query: 151 YTVMLKETFDIIITPNSSEDSDVYSICSICETRL 252
Y K + N E+SD C ICE ++
Sbjct: 550 YMARYKHDSHFLTISNGKEESDQQDWCEICERKI 583
>At5g28480.1 68418.m03462 hypothetical protein
Length = 1230
Score = 24.6 bits (51), Expect = 9.5
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +1
Query: 178 DIIITPNSSEDSDVYSICSI 237
DI+ P+ +D+++YS+C +
Sbjct: 1070 DIVYRPDVLKDANIYSLCRV 1089
>At4g19110.2 68417.m02820 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 464
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 187 ITPNSSEDSDVYSICSICET 246
I P +SE ++Y ICS+ T
Sbjct: 198 IFPGASEADEIYKICSVIGT 217
>At4g19110.1 68417.m02819 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 461
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 187 ITPNSSEDSDVYSICSICET 246
I P +SE ++Y ICS+ T
Sbjct: 198 IFPGASEADEIYKICSVIGT 217
>At3g60330.1 68416.m06743 ATPase, plasma membrane-type, putative /
proton pump, putative similar to P-type
H(+)-transporting ATPase from Nicotiana plumbaginifolia
[SP|Q08435, SP|Q08436], Lycopersicon esculentum
[GI:5901757, SP|P22180], Solanum tuberosum [GI:435003];
contains InterPro accession IPR001757: ATPase, E1-E2
type
Length = 961
Score = 24.6 bits (51), Expect = 9.5
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -2
Query: 261 SIFETSLTYTTYAVYITIFTRVWSYNYIKCFFQHYSVYIFLAVV 130
+IF+ YT YAV ITI R+ + C F + F+ +V
Sbjct: 637 AIFQRMKNYTIYAVSITI--RIVMGFMLLCVFWEFDFPPFMVLV 678
>At2g24520.1 68415.m02929 ATPase, plasma membrane-type, putative /
proton pump, putative strong similarity to P-type
H(+)-transporting ATPase from [Phaseolus vulgaris]
GI:758250, [Lycopersicon esculentum] GI:1621440,
SP|Q03194 {Nicotiana plumbaginifolia}, [Solanum
tuberosum] GI:435001; contains InterPro accession
IPR001757: ATPase, E1-E2 type
Length = 931
Score = 24.6 bits (51), Expect = 9.5
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -2
Query: 261 SIFETSLTYTTYAVYITIFTRVWSYNYIKCFFQ-HYSVYIFLAVVSIRSS*VFKV 100
+IF+ YT YAV ITI V+ + +I +Q +S ++ L + + + +
Sbjct: 619 AIFQRMKNYTIYAVSITI-RIVFGFMFIALIWQFDFSPFMVLIIAILNDGTIMTI 672
>At2g16170.1 68415.m01853 expressed protein similar to At2g06640,
At2g12110, At2g12100, At3g42590, At2g05460
Length = 141
Score = 24.6 bits (51), Expect = 9.5
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +1
Query: 178 DIIITPNSSEDSDVYSICSI 237
DI+ P+ +D+++YS+C +
Sbjct: 38 DIVYRPDVLKDANIYSLCRV 57
>At2g12110.1 68415.m01302 expressed protein similar to At2g16170,
At2g06640, At2g12100, At3g42590, At2g05460
Length = 231
Score = 24.6 bits (51), Expect = 9.5
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +1
Query: 178 DIIITPNSSEDSDVYSICSI 237
DI+ P+ +D+++YS+C +
Sbjct: 38 DIVYRPDVLKDANIYSLCRV 57
>At2g04270.4 68415.m00419 glycoside hydrolase starch-binding
domain-containing protein contains Pfam profile: PF00686
starch binding domain
Length = 713
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 56 TWNISTLCRCCHAEG 100
T+ IS C CCHA G
Sbjct: 563 TFMISEPCSCCHATG 577
>At2g04270.3 68415.m00418 glycoside hydrolase starch-binding
domain-containing protein contains Pfam profile: PF00686
starch binding domain
Length = 619
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 56 TWNISTLCRCCHAEG 100
T+ IS C CCHA G
Sbjct: 563 TFMISEPCSCCHATG 577
>At2g04270.2 68415.m00417 glycoside hydrolase starch-binding
domain-containing protein contains Pfam profile: PF00686
starch binding domain
Length = 871
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 56 TWNISTLCRCCHAEG 100
T+ IS C CCHA G
Sbjct: 721 TFMISEPCSCCHATG 735
>At2g04270.1 68415.m00416 glycoside hydrolase starch-binding
domain-containing protein contains Pfam profile: PF00686
starch binding domain
Length = 996
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 56 TWNISTLCRCCHAEG 100
T+ IS C CCHA G
Sbjct: 846 TFMISEPCSCCHATG 860
>At1g04570.1 68414.m00450 integral membrane transporter family
protein contains 8 transmembrane domains; contains Pfam
PF03092: BT1 family; contains TIGRFAMS TIGR00788:
folate/biopterin transporter; similar to hypothetical
protein GB:AAD38263
Length = 542
Score = 24.6 bits (51), Expect = 9.5
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = -3
Query: 254 LRRVSHILHMLYTSLSSLEFGVIIISNVSFNIT--VYIFSWPSLV*GAARF--LKFLLR 90
+R + HI+ +LY L++ ++ N+ F I+ VY+ + SL A+F L F +R
Sbjct: 367 MRPLIHIIQLLYGLSILLDYILVKQINLGFGISNEVYVLCFSSLAEILAQFKILPFAVR 425
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,249,313
Number of Sequences: 28952
Number of extensions: 86975
Number of successful extensions: 295
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 295
length of database: 12,070,560
effective HSP length: 68
effective length of database: 10,101,824
effective search space used: 222240128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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