Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_E08
(501 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7; Eukaryo... 238 4e-62
UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65; Eukary... 233 2e-60
UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73; Eukary... 196 2e-49
UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2; Dikarya... 188 6e-47
UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130, w... 186 3e-46
UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8; Eu... 174 1e-42
UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11; Eukaryo... 161 6e-39
UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16; Eu... 158 6e-38
UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomon... 157 1e-37
UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1; Encepha... 128 5e-29
UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiell... 117 1e-25
UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environment... 100 4e-20
UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24; Archa... 100 4e-20
UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1; Arabido... 98 8e-20
UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5; Methan... 93 4e-18
UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8; Euryar... 91 1e-17
UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4; Thermo... 87 3e-16
UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4; Thermoprote... 86 5e-16
UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3; Euryar... 83 3e-15
UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3; Pyroba... 80 3e-14
UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1; Nanoar... 78 1e-13
UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1; ... 75 1e-12
UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-lik... 74 2e-12
UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum... 71 1e-11
UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2; Thermoprote... 69 6e-11
UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal ... 62 5e-09
UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2; Bacteri... 50 2e-05
UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 50 4e-05
UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa s... 47 2e-04
UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8; Gammapr... 46 5e-04
UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6; Bacteri... 45 0.001
UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candida... 43 0.003
UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14; Campyl... 43 0.003
UniRef50_Q5FTZ2 Cluster: 30S ribosomal protein S17; n=5; Proteob... 43 0.004
UniRef50_Q3ZZL5 Cluster: 30S ribosomal protein S17; n=7; cellula... 43 0.004
UniRef50_Q6SG39 Cluster: 30S ribosomal protein S17; n=1; uncultu... 42 0.006
UniRef50_Q6KI46 Cluster: 30S ribosomal protein S17; n=3; Mycopla... 42 0.010
UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11; Epsilo... 41 0.014
UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex... 41 0.014
UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1; Thiomic... 40 0.042
UniRef50_Q1ISB3 Cluster: 30S ribosomal protein S17; n=5; Bacteri... 39 0.055
UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing... 39 0.073
UniRef50_Q92QG1 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 39 0.073
UniRef50_Q7MTM2 Cluster: 30S ribosomal protein S17; n=2; cellula... 39 0.073
UniRef50_Q9Z7R6 Cluster: 30S ribosomal protein S17; n=11; Bacter... 39 0.073
UniRef50_Q01WA1 Cluster: 30S ribosomal protein S17; n=3; Bacteri... 38 0.13
UniRef50_Q67JV2 Cluster: 30S ribosomal protein S17; n=4; Bacteri... 38 0.13
UniRef50_Q9TJN6 Cluster: 30S ribosomal protein S17, chloroplast ... 37 0.22
UniRef50_O46903 Cluster: Chloroplast 30S ribosomal protein S17; ... 37 0.22
UniRef50_Q9LHN1 Cluster: 40S ribosomal protein S17-like; n=8; Ma... 37 0.29
UniRef50_Q3YRL8 Cluster: 30S ribosomal protein S17; n=9; Rickett... 37 0.29
UniRef50_Q8FS73 Cluster: 30S ribosomal protein S17; n=9; Bacteri... 37 0.29
UniRef50_Q8ABV5 Cluster: 30S ribosomal protein S17 2; n=2; Bacte... 37 0.29
UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycopla... 36 0.39
UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase domain-conta... 36 0.39
UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12; Bacter... 36 0.51
UniRef50_A3EVR2 Cluster: 30S ribosomal protein S17; n=1; Leptosp... 36 0.68
UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of str... 36 0.68
UniRef50_Q50309 Cluster: 30S ribosomal protein S17; n=4; Bacteri... 36 0.68
UniRef50_O06051 Cluster: 30S ribosomal protein S17; n=22; Bacter... 35 0.90
UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130; Bacte... 35 0.90
UniRef50_Q7UN11 Cluster: 30S ribosomal protein S17; n=4; Plancto... 35 1.2
UniRef50_Q7NEG1 Cluster: 30S ribosomal protein S17; n=7; cellula... 35 1.2
UniRef50_Q4SIL0 Cluster: Chromosome 5 SCAF14581, whole genome sh... 34 1.6
UniRef50_A3VT29 Cluster: 30S ribosomal protein S17; n=2; Alphapr... 34 1.6
UniRef50_Q62GL4 Cluster: 30S ribosomal protein S17; n=144; Bacte... 34 1.6
UniRef50_Q4FUE7 Cluster: 30S ribosomal protein S17; n=16; Gammap... 34 2.1
UniRef50_Q9HJI5 Cluster: Putative uncharacterized protein Ta0983... 33 2.7
UniRef50_Q85FV4 Cluster: Chloroplast 30S ribosomal protein S17; ... 33 2.7
UniRef50_Q233G5 Cluster: Putative uncharacterized protein; n=1; ... 33 3.6
UniRef50_Q6G2X4 Cluster: 30S ribosomal protein S17; n=19; Alphap... 33 3.6
UniRef50_UPI0000498A1C Cluster: hypothetical protein 306.t00001;... 33 4.8
UniRef50_Q97ZH0 Cluster: N(2),N(2)-dimethylguanosine tRNA methyl... 33 4.8
UniRef50_Q9PE67 Cluster: 30S ribosomal protein S17; n=52; Bacter... 33 4.8
UniRef50_Q899R5 Cluster: Conserved protein; n=11; Clostridium|Re... 32 6.3
UniRef50_Q4HSD8 Cluster: Putative uncharacterized protein; n=1; ... 32 6.3
UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit... 32 6.3
UniRef50_UPI0000DB6FFA Cluster: PREDICTED: similar to Papilin CG... 32 8.3
UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;... 32 8.3
UniRef50_Q1NPK7 Cluster: 30S ribosomal protein S17; n=2; Proteob... 32 8.3
UniRef50_Q2PBA5 Cluster: Putative H3K9 methyltransferase; n=1; D... 32 8.3
>UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7;
Eukaryota|Rep: 40S ribosomal protein S11 - Triatoma
infestans (Assassin bug)
Length = 194
Score = 238 bits (583), Expect = 4e-62
Identities = 112/132 (84%), Positives = 120/132 (90%)
Frame = +3
Query: 15 QTEKAFQKQATVFLNRKGGMKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIR 194
+TEKAFQKQ VFL K K K +R K+VGLGFKTPREA+EGTYIDKKCPFTGNVSIR
Sbjct: 47 ETEKAFQKQPHVFLASKVSSK-KPLRRYKSVGLGFKTPREAIEGTYIDKKCPFTGNVSIR 105
Query: 195 GRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIG 374
GRILTGVVQKMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDVEIGD+VT+G
Sbjct: 106 GRILTGVVQKMKMQRTIVIRRDYLHYVRKYNRFEKRHKNMSVHLSPCFRDVEIGDVVTVG 165
Query: 375 ECRPLSKTVRFN 410
ECRPLSKTVRFN
Sbjct: 166 ECRPLSKTVRFN 177
Score = 60.9 bits (141), Expect = 2e-08
Identities = 29/46 (63%), Positives = 36/46 (78%), Gaps = 4/46 (8%)
Frame = +3
Query: 9 ADQTEKAFQKQATVFLNRKGGM----KRKDMRHSKNVGLGFKTPRE 134
ADQTE++FQKQ T+FLNRK G+ K +R+ +NVGLGFKTPRE
Sbjct: 2 ADQTERSFQKQPTIFLNRKKGLGVKKKANALRYIRNVGLGFKTPRE 47
>UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65;
Eukaryota|Rep: 40S ribosomal protein S11 - Homo sapiens
(Human)
Length = 158
Score = 233 bits (570), Expect = 2e-60
Identities = 111/153 (72%), Positives = 125/153 (81%), Gaps = 5/153 (3%)
Frame = +3
Query: 15 QTEKAFQKQATVFLNRKGGM-----KRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTG 179
QTE+A+QKQ T+F N+K + K K R+ KN+GLGFKTP+EA+EGTYIDKKCPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 180 NVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGD 359
NVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGD
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGD 124
Query: 360 IVTIGECRPLSKTVRFNXXXXXXXXXXXXIFQK 458
IVT+GECRPLSKTVRFN FQK
Sbjct: 125 IVTVGECRPLSKTVRFNVLKVTKAAGTKKQFQK 157
>UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73;
Eukaryota|Rep: 40S ribosomal protein S11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 156
Score = 196 bits (478), Expect = 2e-49
Identities = 89/132 (67%), Positives = 108/132 (81%)
Frame = +3
Query: 15 QTEKAFQKQATVFLNRKGGMKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIR 194
Q+E+AFQKQ +F N K ++ R KN GLGFKTP+ A+EG+YIDKKCPFTG VSIR
Sbjct: 8 QSERAFQKQPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIR 67
Query: 195 GRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIG 374
G+ILTG V KM RTIVIRR YLHY+PKYNR+EKRH+N+ VH+SP FR V++GDIVT+G
Sbjct: 68 GKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFR-VQVGDIVTVG 126
Query: 375 ECRPLSKTVRFN 410
+CRP+SKTVRFN
Sbjct: 127 QCRPISKTVRFN 138
>UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2;
Dikarya|Rep: 40S ribosomal protein S11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 152
Score = 188 bits (458), Expect = 6e-47
Identities = 86/132 (65%), Positives = 105/132 (79%)
Frame = +3
Query: 15 QTEKAFQKQATVFLNRKGGMKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIR 194
Q+E+AFQKQ +F N K G R R K+VGLGFKTP EA+ G Y+DKKCPF G VSIR
Sbjct: 8 QSERAFQKQPHIFQNAKKGAGR---RWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIR 64
Query: 195 GRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIG 374
GRILTG V KM RTI+IRR+YLH++PKYNR+EKRH+N++ H+SP FR + GD+VT+G
Sbjct: 65 GRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFR-INEGDVVTVG 123
Query: 375 ECRPLSKTVRFN 410
+CRPLSKTVRFN
Sbjct: 124 QCRPLSKTVRFN 135
>UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=18; Eukaryota|Rep:
Chromosome undetermined scaffold_130, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 188
Score = 186 bits (452), Expect = 3e-46
Identities = 85/135 (62%), Positives = 105/135 (77%), Gaps = 3/135 (2%)
Frame = +3
Query: 15 QTEKAFQKQATVFLNRKGGMKRKD---MRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNV 185
+ ++AFQKQ +F N K + +K +R+ K VGLGFK P++A+EG YIDKKCPFTGNV
Sbjct: 34 KNQRAFQKQEGIFQNSKKLLAKKTSKGVRYWKEVGLGFKVPKDAIEGNYIDKKCPFTGNV 93
Query: 186 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 365
S+RG IL G+V KM RTI+IRRDYLHY+ KYNR+EKRHRN+ VH+SP F V+ GDIV
Sbjct: 94 SVRGAILKGIVISTKMTRTIIIRRDYLHYVAKYNRYEKRHRNVPVHISPAFGPVKEGDIV 153
Query: 366 TIGECRPLSKTVRFN 410
G+CRPLSKTVRFN
Sbjct: 154 VCGQCRPLSKTVRFN 168
>UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8;
Eukaryota|Rep: Putative ribosomal protein S11 - Physarum
polycephalum (Slime mold)
Length = 158
Score = 174 bits (423), Expect = 1e-42
Identities = 83/137 (60%), Positives = 104/137 (75%), Gaps = 5/137 (3%)
Frame = +3
Query: 15 QTEKAFQKQATVFLNRKG----GMKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGN 182
QT +QKQ +F+ +K +K+ D R+ + VGLG+KTP+ A+EGT++D KCPFTGN
Sbjct: 6 QTGLFYQKQKPIFVGKKRLLGLKLKKSDTRYVRQVGLGYKTPKAALEGTFVDDKCPFTGN 65
Query: 183 VSIRGRILTGVVQKM-KMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGD 359
VSIRGRIL GVV KM+RT+V+RR+YLHY+ KY R+EKRH N SVH SP DV+ GD
Sbjct: 66 VSIRGRILRGVVVSAGKMKRTVVVRRNYLHYIQKYKRYEKRHTNFSVHCSPAL-DVKEGD 124
Query: 360 IVTIGECRPLSKTVRFN 410
VT+GECRPLSKTVRFN
Sbjct: 125 TVTVGECRPLSKTVRFN 141
>UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11;
Eukaryota|Rep: OSJNBa0070C17.20 protein - Oryza sativa
subsp. japonica (Rice)
Length = 185
Score = 161 bits (392), Expect = 6e-39
Identities = 89/163 (54%), Positives = 107/163 (65%), Gaps = 29/163 (17%)
Frame = +3
Query: 9 ADQTEKAFQKQATVFLN-RKGGMKRKD----MRHSKNVGLGFKTPREAVEGTYIDKKCPF 173
A+QTEKAF KQ VFL+ +K G +K R K++GLGFKTPREA+EGTYIDKKCPF
Sbjct: 2 AEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPF 61
Query: 174 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN---------------------- 287
TG VSIRGRI+ G KM RTI++RR+YLH++ KY
Sbjct: 62 TGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISDL 121
Query: 288 --RFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFN 410
R+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVRFN
Sbjct: 122 GCRYEKRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTVRFN 163
>UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16;
Eukaryota|Rep: Ribosomal protein s11 homolog -
Leishmania major
Length = 141
Score = 158 bits (384), Expect = 6e-38
Identities = 71/118 (60%), Positives = 92/118 (77%)
Frame = +3
Query: 57 NRKGGMKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQ 236
+RK K +R+SK +GLGFKTP +A+ G YID+KCPFT NV IRGRIL GVV KM
Sbjct: 5 SRKHVNKSGHIRYSKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGVVHSTKMH 64
Query: 237 RTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFN 410
RTI+IRR+YLH++ KY R++KRH++++VH SP F D + GD V IG+CRPLSKT+R+N
Sbjct: 65 RTIIIRRNYLHFIKKYQRYQKRHKSLAVHCSPAF-DPKQGDEVVIGQCRPLSKTIRYN 121
>UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomonas
salina|Rep: 60S ribosomal protein 11 - Rhodomonas salina
(Cryptomonas salina)
Length = 145
Score = 157 bits (382), Expect = 1e-37
Identities = 68/113 (60%), Positives = 86/113 (76%)
Frame = +3
Query: 72 MKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVI 251
+ +K KN+G+G K P EA+ Y DKKCPF G +SIRGRIL G V KM+R+++I
Sbjct: 16 LTKKKKNSFKNIGMGLKAPLEAINNNYFDKKCPFRGLISIRGRILRGTVISTKMKRSVII 75
Query: 252 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFN 410
RRDYLH++ KY RFEKRH+N+ H SPCFR V+ GD+VTIG+CRPLSKT+RFN
Sbjct: 76 RRDYLHWISKYKRFEKRHKNIPCHCSPCFR-VQEGDLVTIGQCRPLSKTIRFN 127
>UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S11
- Encephalitozoon cuniculi
Length = 156
Score = 128 bits (310), Expect = 5e-29
Identities = 60/126 (47%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
Frame = +3
Query: 24 KAFQKQATVFLNRKGGMKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRI 203
K F +Q V + + R GFK P A YIDKKCPFTG+V++RGR+
Sbjct: 8 KVFPRQTGVCAKPYASHEEQPKRRVNAEVCGFKAPETAYTRQYIDKKCPFTGDVNVRGRL 67
Query: 204 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRD-VEIGDIVTIGEC 380
GVV+KMK ++TIV+ +Y+HY KY R+ +RH N SVH+SPCF + +GD V GE
Sbjct: 68 FKGVVKKMKAEKTIVVVANYVHYSKKYKRYSRRHTNFSVHMSPCFEGMINVGDTVICGET 127
Query: 381 RPLSKT 398
RPLSKT
Sbjct: 128 RPLSKT 133
>UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiella
natans|Rep: Ribosomal protein S11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 119
Score = 117 bits (282), Expect = 1e-25
Identities = 53/86 (61%), Positives = 67/86 (77%)
Frame = +3
Query: 153 IDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSP 332
IDKKCPF G +++RGRIL G V+K+KM+ T++IR DYL +L KYNRF KRH+N+ HLS
Sbjct: 23 IDKKCPFYGKINLRGRILRGKVRKIKMKSTVIIRIDYLKFLKKYNRFVKRHKNIPAHLSN 82
Query: 333 CFRDVEIGDIVTIGECRPLSKTVRFN 410
++GDIV I ECRP+SKTVRFN
Sbjct: 83 LL-TCKVGDIVIIAECRPISKTVRFN 107
>UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environmental
samples|Rep: Ribosomal protein S17 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 111
Score = 99.5 bits (237), Expect = 4e-20
Identities = 39/84 (46%), Positives = 60/84 (71%)
Frame = +3
Query: 156 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 335
D+ CPF G++ +RG+I+ G + K+ MQ++I++ R+++ Y+ K+ R+EKR R + HL C
Sbjct: 19 DENCPFYGSLRLRGQIIEGTIAKVGMQKSIIVEREHIRYMQKFERYEKRTRRYAAHLPSC 78
Query: 336 FRDVEIGDIVTIGECRPLSKTVRF 407
DV +GD V I ECRPLSKT+ F
Sbjct: 79 IGDVNVGDSVRIMECRPLSKTITF 102
>UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24;
Archaea|Rep: 30S ribosomal protein S17P - Methanopyrus
kandleri
Length = 118
Score = 99.5 bits (237), Expect = 4e-20
Identities = 48/108 (44%), Positives = 65/108 (60%)
Frame = +3
Query: 84 DMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDY 263
+ R +K++GLG K PR + D CPF GN+ +RG IL GVV +M +T+++ R+Y
Sbjct: 4 EYRMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREY 59
Query: 264 LHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 407
Y KY R+E+R + H PC D + GD V I ECRPLSKT F
Sbjct: 60 YRYDRKYERWERRRSRIPAHNPPCI-DAQEGDKVRIAECRPLSKTKSF 106
>UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1;
Arabidopsis thaliana|Rep: Ribosomal protein 40S-S11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 98.3 bits (234), Expect = 8e-20
Identities = 43/73 (58%), Positives = 55/73 (75%)
Frame = +3
Query: 57 NRKGGMKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQ 236
N +G K R KN+GLGFKTPREA++G Y+DKKCPFTG VSIRGRIL + + +MQ
Sbjct: 31 NLEGKRPGKVERFWKNIGLGFKTPREAIDGAYVDKKCPFTGTVSIRGRILVWYLPQCEMQ 90
Query: 237 RTIVIRRDYLHYL 275
TI++ RDYLH++
Sbjct: 91 STIIVARDYLHFV 103
>UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5;
Methanomicrobia|Rep: 30S ribosomal protein S17P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 109
Score = 92.7 bits (220), Expect = 4e-18
Identities = 44/104 (42%), Positives = 60/104 (57%)
Frame = +3
Query: 96 SKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 275
++++GL P E + Y CPF G + +RG+IL G V KM T+VI R Y+ +
Sbjct: 2 ARDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMV 57
Query: 276 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 407
KY R+EKR + H C ++GDIVTI ECRP+SKT F
Sbjct: 58 SKYQRYEKRRSKIHAHNPACI-SAKVGDIVTIVECRPISKTKSF 100
>UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 112
Score = 91.1 bits (216), Expect = 1e-17
Identities = 44/98 (44%), Positives = 60/98 (61%)
Frame = +3
Query: 105 VGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKY 284
+GL + P E T D+ CPF G +S+RG+ L G V M++T+V+ R+Y +PKY
Sbjct: 3 LGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPKY 58
Query: 285 NRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 398
+RF KR + H C D+ +GD VTI ECRPLSKT
Sbjct: 59 DRFMKRRSRVPAHAPDCL-DLAVGDTVTIAECRPLSKT 95
>UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4;
Thermoprotei|Rep: 30S ribosomal protein S17P - Aeropyrum
pernix
Length = 114
Score = 86.6 bits (205), Expect = 3e-16
Identities = 40/92 (43%), Positives = 58/92 (63%)
Frame = +3
Query: 132 EAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRN 311
E E D CP+ G + +RG +L GVV K + +R +V++ YL+Y KYNR+E+R +
Sbjct: 16 EPPEKVCSDPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKK 75
Query: 312 MSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 407
+ HL C V+ GD+V IGE P+SKTV+F
Sbjct: 76 IHAHLPDCI-SVKEGDVVVIGETMPISKTVKF 106
>UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4;
Thermoprotei|Rep: Ribosomal protein S17 - Caldivirga
maquilingensis IC-167
Length = 152
Score = 85.8 bits (203), Expect = 5e-16
Identities = 43/103 (41%), Positives = 66/103 (64%)
Frame = +3
Query: 99 KNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 278
+++G+ + P +AV D KCP+ G+V +RG IL G V + M + +VI+ ++LHY P
Sbjct: 32 RHIGVPWLLPPKAVCN---DDKCPWHGHVKVRGTILEGRVVSVYMGQ-VVIQHEWLHYSP 87
Query: 279 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 407
KY R+ ++ RN+ HL C + V +GD V IGE RPL+K + F
Sbjct: 88 KYKRYIRKRRNIHAHLPSCIK-VNVGDYVVIGETRPLAKFISF 129
>UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Thermoplasma acidophilum
Length = 109
Score = 83.4 bits (197), Expect = 3e-15
Identities = 39/105 (37%), Positives = 61/105 (58%)
Frame = +3
Query: 93 HSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY 272
+++N+GL K P E D CP+ G +S+RG++LTG V M ++ V+ R+Y Y
Sbjct: 2 YTRNIGLDVKLP----ESECNDPHCPYHGKLSVRGQVLTGKVVSANMTKSAVVAREYQQY 57
Query: 273 LPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 407
+PKY R + + VH+ C + ++ GD V ECR L+KT+ F
Sbjct: 58 IPKYERKATKIKKYHVHVPDCIK-IKPGDTVRFAECRKLAKTISF 101
>UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3;
Pyrobaculum|Rep: 30S ribosomal protein S17P -
Pyrobaculum aerophilum
Length = 123
Score = 79.8 bits (188), Expect = 3e-14
Identities = 39/101 (38%), Positives = 63/101 (62%)
Frame = +3
Query: 99 KNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 278
KN+G+ P +V D CP+ G++ +R ++L V+K++M + V+ ++LHY+
Sbjct: 4 KNIGIPHVLPPASVCD---DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLHYIR 60
Query: 279 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTV 401
KYNR+E+R + M V + C +V+ GD V I E RPLSKT+
Sbjct: 61 KYNRYERRRKRMRVRVPECI-EVKPGDKVIIAETRPLSKTI 100
>UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S17P -
Nanoarchaeum equitans
Length = 113
Score = 78.2 bits (184), Expect = 1e-13
Identities = 36/84 (42%), Positives = 50/84 (59%)
Frame = +3
Query: 156 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 335
DKKCP G++ +RG G V K +T+ I ++LPKY R+E R ++ +L C
Sbjct: 16 DKKCPHHGHLKVRGFFFKGKVIKKSDNKTVKIEIIRYYWLPKYERYELRRTRITAYLPEC 75
Query: 336 FRDVEIGDIVTIGECRPLSKTVRF 407
+D++ GD V IGE RPLSKT F
Sbjct: 76 LKDIKEGDYVLIGETRPLSKTKHF 99
>UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 162
Score = 74.5 bits (175), Expect = 1e-12
Identities = 41/104 (39%), Positives = 60/104 (57%)
Frame = -2
Query: 425 RDLQYIEPDCLGKRPALANCDDVSDFHVPEARR*MNRHVPVSLLKSVVFRQVMEIIAPDN 246
R+ Q IE D L N D+++ F+ E+ R + ++ VS SV+F VM++I+ DN
Sbjct: 60 RNFQNIESDSFRNWSTLTNGDNITFFN-SESWRDVGSNILVSFFVSVIFWNVMQVISSDN 118
Query: 245 NCSLHFHFLNNACQDTASDGHVTREWTFLINVCAFNGLTGCLET 114
+ ++HF N+ QD SDG+ T EWTF +NV FNG ET
Sbjct: 119 DGTVHFGGNNSTGQDFTSDGNSTSEWTFFVNVRTFNGSFWGFET 162
>UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-like;
n=1; Methanosarcina acetivorans|Rep: Putative 30S
ribosomal protein S17P-like - Methanosarcina acetivorans
Length = 486
Score = 74.1 bits (174), Expect = 2e-12
Identities = 40/104 (38%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Frame = +3
Query: 99 KNVGL-GFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 275
+++G+ G K P E D +CPF G +S+RG+IL G+V KM + IV++R +
Sbjct: 2 RDIGINGIKLPTEDCN----DPECPFHGKLSVRGQILKGIVISDKMTKNIVMKRYREKWS 57
Query: 276 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 407
KY R ++ + + PC + +IGDI+TI ECRPL+K F
Sbjct: 58 YKYQRKQRVSSKIHAYSPPCM-EAKIGDIITIAECRPLNKGSSF 100
>UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17 - Thermofilum
pendens (strain Hrk 5)
Length = 111
Score = 70.9 bits (166), Expect = 1e-11
Identities = 34/84 (40%), Positives = 50/84 (59%)
Frame = +3
Query: 156 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 335
D CP+ G + +RG++L V+K+KM V +YL+Y KY R+E R + V + PC
Sbjct: 21 DPLCPWHGELPVRGQVLRLRVEKVKMHNVAVAVHEYLYYNEKYKRYEVRRKKKHVRVPPC 80
Query: 336 FRDVEIGDIVTIGECRPLSKTVRF 407
V+ GD V + E RPL+K+V F
Sbjct: 81 I-PVKPGDEVIVAETRPLAKSVSF 103
>UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2;
Thermoprotei|Rep: Ribosomal protein S17 - Cenarchaeum
symbiosum
Length = 109
Score = 68.9 bits (161), Expect = 6e-11
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Frame = +3
Query: 96 SKNVGLGFKTP-REAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY 272
++ +GL P REA +G DK PF G + IRG++ G + K + T+VI ++ Y
Sbjct: 2 TREIGLPVPAPSREAADG---DKNNPFNGTLPIRGKLFEGTIVSAKARSTVVIEKESPVY 58
Query: 273 LPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 407
K+ R+ + + H+ P DV GD V ECRP++K+V F
Sbjct: 59 FTKFKRYARGRSRIHAHV-PSNIDVREGDRVLAAECRPVAKSVSF 102
>UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal
protein S11; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S11 - Macaca mulatta
Length = 84
Score = 62.5 bits (145), Expect = 5e-09
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +3
Query: 309 NMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 407
NMS+H S CFRDV IG IVT+GEC+PLSKTVRF
Sbjct: 34 NMSIHFSTCFRDVHIGHIVTVGECQPLSKTVRF 66
>UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2;
Bacteria|Rep: 30S ribosomal protein S17 - Petrotoga
mobilis SJ95
Length = 110
Score = 50.4 bits (115), Expect = 2e-05
Identities = 29/70 (41%), Positives = 38/70 (54%)
Frame = +3
Query: 198 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 377
+I+TG V M +TI + D L PKY++F ++ R H + EIGDIV I E
Sbjct: 4 KIITGKVVSNAMDKTITVETDRLTKHPKYHKFVRKTRRYHAHDEN--NECEIGDIVEIEE 61
Query: 378 CRPLSKTVRF 407
R LSKT F
Sbjct: 62 SRKLSKTKAF 71
>UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Thermotoga
maritima
Length = 107
Score = 49.6 bits (113), Expect = 4e-05
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = +3
Query: 204 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 383
LTG+V KM +T+V+ + L P Y ++ KR + H + +IGD+V I E R
Sbjct: 6 LTGIVVSDKMDKTVVVAVEKLVQHPLYKKYVKRTKKYHAHDER--NECKIGDVVEIEETR 63
Query: 384 PLSKTVRF 407
PLSKT R+
Sbjct: 64 PLSKTKRW 71
>UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa sp.
PS|Rep: Ribosomal protein S17 - Beggiatoa sp. PS
Length = 100
Score = 47.2 bits (107), Expect = 2e-04
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = +3
Query: 198 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 377
R L G V KM +TI + PKY ++ KR + VH ++GDIV I +
Sbjct: 21 RTLIGQVVSDKMHKTITVLVSRKIKHPKYGKYIKRSTKLHVHDEE--NTCQVGDIVAISQ 78
Query: 378 CRPLSKT 398
CRP+SKT
Sbjct: 79 CRPISKT 85
>UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8;
Gammaproteobacteria|Rep: 30S ribosomal protein S17 -
Blochmannia floridanus
Length = 85
Score = 46.0 bits (104), Expect = 5e-04
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +3
Query: 201 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGEC 380
+L G+V + KMQ++IV+ + + Y +F R + VH + +V GDIV I EC
Sbjct: 7 VLQGIVIRSKMQKSIVVSINRIVKHSMYKKFINRTTKIYVHDTNNISNV--GDIVEITEC 64
Query: 381 RPLSKT 398
RP+SKT
Sbjct: 65 RPISKT 70
>UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6;
Bacteria|Rep: 30S ribosomal protein S17 - Thermus
thermophilus
Length = 105
Score = 44.8 bits (101), Expect = 0.001
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +3
Query: 198 RILTGVVQKMKMQR--TIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 371
++LTGVV KMQ+ T+++ R + H P Y + KR + H P ++GD+V I
Sbjct: 4 KVLTGVVVSDKMQKTVTVLVERQFPH--PLYGKVIKRSKKYLAH-DP-EEKYKLGDVVEI 59
Query: 372 GECRPLSKTVRF 407
E RP+SK RF
Sbjct: 60 IESRPISKRKRF 71
>UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candidatus
Portiera aleyrodidarum|Rep: 30S ribosomal protein S17 -
Candidatus Portiera aleyrodidarum
Length = 83
Score = 43.2 bits (97), Expect = 0.003
Identities = 27/71 (38%), Positives = 38/71 (53%)
Frame = +3
Query: 186 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 365
+I+ R + G V KM +TIV+ + L Y ++ KR + +SVH S EIGDIV
Sbjct: 4 NIKVRKIKGKVVSNKMNKTIVVLIERLFKHKTYGKYIKRSKKLSVHDSK--NKAEIGDIV 61
Query: 366 TIGECRPLSKT 398
E +SKT
Sbjct: 62 ECAESLKISKT 72
>UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14;
Campylobacterales|Rep: 30S ribosomal protein S17 -
Campylobacter jejuni
Length = 83
Score = 43.2 bits (97), Expect = 0.003
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 198 RILTGVVQKMKMQRT--IVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 371
R + GVV K+ ++T +++ R +H P+Y + KR + +H +V++GD V
Sbjct: 5 REIQGVVVKIAGEKTASVLVERKVVH--PRYRKIVKRFKKYLIHDER--NEVKVGDTVVA 60
Query: 372 GECRPLSKTVRF 407
ECRPLSK F
Sbjct: 61 VECRPLSKRKSF 72
>UniRef50_Q5FTZ2 Cluster: 30S ribosomal protein S17; n=5;
Proteobacteria|Rep: 30S ribosomal protein S17 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 90
Score = 42.7 bits (96), Expect = 0.004
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +3
Query: 198 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 377
R+LTG V KM +T+ + D P Y +F +R + + H + GD+V I E
Sbjct: 4 RVLTGRVTSDKMDKTVTVLLDRRIMHPLYKKFIRRSKKYAAHDEE--NVCQTGDLVRIEE 61
Query: 378 CRPLSK 395
C P+SK
Sbjct: 62 CAPISK 67
>UniRef50_Q3ZZL5 Cluster: 30S ribosomal protein S17; n=7; cellular
organisms|Rep: 30S ribosomal protein S17 -
Dehalococcoides sp. (strain CBDB1)
Length = 90
Score = 42.7 bits (96), Expect = 0.004
Identities = 24/71 (33%), Positives = 38/71 (53%)
Frame = +3
Query: 183 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 362
+ I+ + G V KM++TIV+ D + P Y + +R VH + +IGD+
Sbjct: 1 MEIKNKTRIGHVISDKMEKTIVVGIDVVKRHPLYKKTYRRTMKYLVHDEK--NEAKIGDM 58
Query: 363 VTIGECRPLSK 395
+ I ECRP+SK
Sbjct: 59 IEIVECRPISK 69
>UniRef50_Q6SG39 Cluster: 30S ribosomal protein S17; n=1; uncultured
bacterium 562|Rep: 30S ribosomal protein S17 -
uncultured bacterium 562
Length = 95
Score = 42.3 bits (95), Expect = 0.006
Identities = 26/71 (36%), Positives = 35/71 (49%)
Frame = +3
Query: 186 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 365
S RIL+GVV K +TI ++ + P Y + KR + H IGD V
Sbjct: 3 STNPRILSGVVISDKADKTITVKIERKVKHPLYGKVMKRATKVHAHDEN--NSAAIGDQV 60
Query: 366 TIGECRPLSKT 398
T+ ECRP SK+
Sbjct: 61 TVKECRPFSKS 71
>UniRef50_Q6KI46 Cluster: 30S ribosomal protein S17; n=3;
Mycoplasma|Rep: 30S ribosomal protein S17 - Mycoplasma
mobile
Length = 92
Score = 41.5 bits (93), Expect = 0.010
Identities = 27/72 (37%), Positives = 36/72 (50%)
Frame = +3
Query: 192 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 371
R + LTGVV K +TIV+ D P Y + K + + H + ++GDIV I
Sbjct: 7 RRKALTGVVVSDKSSKTIVVAVDTFKKDPLYQKRFKSTKKFAAHDEK--EEAQMGDIVKI 64
Query: 372 GECRPLSKTVRF 407
RPLSKT F
Sbjct: 65 VGTRPLSKTKFF 76
>UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11;
Epsilonproteobacteria|Rep: 30S ribosomal protein S17 -
Wolinella succinogenes
Length = 88
Score = 41.1 bits (92), Expect = 0.014
Identities = 26/74 (35%), Positives = 39/74 (52%)
Frame = +3
Query: 189 IRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 368
I+G+++T K TI++ R H PKY + KR + VH V++GD++
Sbjct: 11 IQGKVVTKAGDKSV---TILVERRVTH--PKYRKIVKRFKKYIVHDES--NAVKVGDMIE 63
Query: 369 IGECRPLSKTVRFN 410
ECRPLSK F+
Sbjct: 64 AIECRPLSKRKSFS 77
>UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex
aeolicus|Rep: 30S ribosomal protein S17 - Aquifex
aeolicus
Length = 107
Score = 41.1 bits (92), Expect = 0.014
Identities = 25/68 (36%), Positives = 35/68 (51%)
Frame = +3
Query: 204 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 383
L GVV KM +T+V++ D P Y + + + H + +GDIV I E R
Sbjct: 17 LVGVVVSDKMDKTVVVKVDRKVPHPIYGKHIIKSKKYHAHDE--HNECRVGDIVMIRETR 74
Query: 384 PLSKTVRF 407
PLSKT R+
Sbjct: 75 PLSKTKRW 82
>UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1;
Thiomicrospira crunogena XCL-2|Rep: 30S ribosomal
protein S17 - Thiomicrospira crunogena (strain XCL-2)
Length = 87
Score = 39.5 bits (88), Expect = 0.042
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +3
Query: 192 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 371
+ R + GVV M +++V+ + PKY +F ++ + H +GD VTI
Sbjct: 7 KARTMQGVVVSNGMDKSVVVMTNRYIKHPKYKKFVRKSTKVMAH--DADNACGVGDRVTI 64
Query: 372 GECRPLSK 395
EC P SK
Sbjct: 65 SECTPFSK 72
>UniRef50_Q1ISB3 Cluster: 30S ribosomal protein S17; n=5;
Bacteria|Rep: 30S ribosomal protein S17 - Acidobacteria
bacterium (strain Ellin345)
Length = 101
Score = 39.1 bits (87), Expect = 0.055
Identities = 25/68 (36%), Positives = 33/68 (48%)
Frame = +3
Query: 204 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 383
L G+V KMQ+TIV++ + Y R R + H + IGD V I E R
Sbjct: 16 LIGLVVSTKMQKTIVVQVERQKSHAMYGRVISRRKRFYAHDEE--QTAHIGDYVRIEETR 73
Query: 384 PLSKTVRF 407
PLSK R+
Sbjct: 74 PLSKLKRW 81
>UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
ribosomal protein S17 containing protein - Tetrahymena
thermophila SB210
Length = 205
Score = 38.7 bits (86), Expect = 0.073
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 195 GRILTG-VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 371
GR L G V+Q KM +T+ ++ DY ++ PK F+ + VH S F GD V I
Sbjct: 24 GRELFGTVIQHGKMDKTVTVKVDYRYWYPKTKEFKSKTSKYQVHDSENF--CVTGDKVVI 81
Query: 372 GECRPLS 392
P+S
Sbjct: 82 KSMLPIS 88
>UniRef50_Q92QG1 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 78
Score = 38.7 bits (86), Expect = 0.073
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +3
Query: 198 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 377
RIL G V K +T+V+R + P + +R + H ++GD+V+I E
Sbjct: 4 RILQGTVVSDKNDKTVVVRVERRFAHPILQKTVRRSKKYKAHDEN--NQFKVGDLVSIEE 61
Query: 378 CRPLSKTVRF 407
C P+SK R+
Sbjct: 62 CAPISKDKRW 71
>UniRef50_Q7MTM2 Cluster: 30S ribosomal protein S17; n=2; cellular
organisms|Rep: 30S ribosomal protein S17 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 84
Score = 38.7 bits (86), Expect = 0.073
Identities = 23/66 (34%), Positives = 32/66 (48%)
Frame = +3
Query: 210 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 389
GVV KM +TI + + P Y +F + + H + IGD V I E RPL
Sbjct: 11 GVVSSNKMDKTITVAVKWKEKHPIYGKFVNKTKKYHAHDEK--NECGIGDTVRIMETRPL 68
Query: 390 SKTVRF 407
S+T R+
Sbjct: 69 SRTKRW 74
>UniRef50_Q9Z7R6 Cluster: 30S ribosomal protein S17; n=11;
Bacteria|Rep: 30S ribosomal protein S17 - Chlamydia
pneumoniae (Chlamydophila pneumoniae)
Length = 86
Score = 38.7 bits (86), Expect = 0.073
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = +3
Query: 198 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 377
++ GVV KM++T+V+R + + P+Y + + + H V GD V I E
Sbjct: 10 KVKIGVVVSAKMEKTVVVRVERIFSHPQYLKVVRSSKKYYAHTE---LKVSEGDKVKIQE 66
Query: 378 CRPLSKTVRF 407
RPLSK R+
Sbjct: 67 TRPLSKLKRW 76
>UniRef50_Q01WA1 Cluster: 30S ribosomal protein S17; n=3;
Bacteria|Rep: 30S ribosomal protein S17 - Solibacter
usitatus (strain Ellin6076)
Length = 102
Score = 37.9 bits (84), Expect = 0.13
Identities = 24/66 (36%), Positives = 31/66 (46%)
Frame = +3
Query: 210 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 389
G V KMQ+TIV+ P Y R + + H +GD+V I ECRPL
Sbjct: 16 GEVVSTKMQKTIVVEVSRRVPHPLYKRIIGKRKKFYAHDEE--GRANLGDVVRIIECRPL 73
Query: 390 SKTVRF 407
SK R+
Sbjct: 74 SKLKRW 79
>UniRef50_Q67JV2 Cluster: 30S ribosomal protein S17; n=4;
Bacteria|Rep: 30S ribosomal protein S17 -
Symbiobacterium thermophilum
Length = 94
Score = 37.9 bits (84), Expect = 0.13
Identities = 23/66 (34%), Positives = 33/66 (50%)
Frame = +3
Query: 210 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 389
GVV KM +T+V+ + L P Y + +R + H ++GD V I E RPL
Sbjct: 13 GVVTSDKMDKTVVVAVETLVQHPLYKKRVRRTKKFKAHDE--HNQCKVGDKVRIMETRPL 70
Query: 390 SKTVRF 407
SK R+
Sbjct: 71 SKEKRW 76
>UniRef50_Q9TJN6 Cluster: 30S ribosomal protein S17, chloroplast
precursor; n=13; Magnoliophyta|Rep: 30S ribosomal
protein S17, chloroplast precursor - Zea mays (Maize)
Length = 132
Score = 37.1 bits (82), Expect = 0.22
Identities = 24/70 (34%), Positives = 34/70 (48%)
Frame = +3
Query: 198 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 377
R LTG V K +T+ + L PKY R E+ + H P ++GD+V +
Sbjct: 33 RQLTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAH-DPD-NQFKVGDVVELQP 90
Query: 378 CRPLSKTVRF 407
RP+SKT F
Sbjct: 91 SRPISKTKHF 100
>UniRef50_O46903 Cluster: Chloroplast 30S ribosomal protein S17;
n=23; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S17 - Guillardia theta (Cryptomonas phi)
Length = 90
Score = 37.1 bits (82), Expect = 0.22
Identities = 24/75 (32%), Positives = 41/75 (54%)
Frame = +3
Query: 183 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 362
+SI+ R+ G+V KM +T+V+ +Y + + + VH P + ++GD+
Sbjct: 1 MSIKERL--GLVISDKMDKTVVVSIANRVTHKRYGKIVTKTKKYKVH-DPN-NNCQVGDL 56
Query: 363 VTIGECRPLSKTVRF 407
+ I E RPLSKT R+
Sbjct: 57 ILINETRPLSKTKRW 71
>UniRef50_Q9LHN1 Cluster: 40S ribosomal protein S17-like; n=8;
Magnoliophyta|Rep: 40S ribosomal protein S17-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 105
Score = 36.7 bits (81), Expect = 0.29
Identities = 23/66 (34%), Positives = 31/66 (46%)
Frame = +3
Query: 198 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 377
+ + G V KMQ ++V+ D L + YNR+ KR H IGD V +
Sbjct: 2 KAVIGTVVSNKMQMSVVVAVDRLFHNNIYNRYVKRTSKFMAHDEK--DSCNIGDRVKLDP 59
Query: 378 CRPLSK 395
RPLSK
Sbjct: 60 SRPLSK 65
>UniRef50_Q3YRL8 Cluster: 30S ribosomal protein S17; n=9;
Rickettsiales|Rep: 30S ribosomal protein S17 - Ehrlichia
canis (strain Jake)
Length = 83
Score = 36.7 bits (81), Expect = 0.29
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +3
Query: 198 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 377
++LTGVV K +TI + + Y + K+ +N VH + + GD+V I E
Sbjct: 13 KVLTGVVVATKCDKTIKVMVSRMVRHKTYKKIVKKRKNYVVHDE--YNKCKCGDVVKIQE 70
Query: 378 CRPLSKTVRF 407
P+S T R+
Sbjct: 71 HIPISATKRW 80
>UniRef50_Q8FS73 Cluster: 30S ribosomal protein S17; n=9;
Bacteria|Rep: 30S ribosomal protein S17 -
Corynebacterium efficiens
Length = 92
Score = 36.7 bits (81), Expect = 0.29
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +3
Query: 198 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 377
++ TG V KMQ+TIV+ + Y++ + ++ + H IGD+V I E
Sbjct: 15 KVRTGYVVSDKMQKTIVVELEDRKQHALYSKILRTNKKVKAHDEE--NIAGIGDLVRIEE 72
Query: 378 CRPLSK 395
RPLSK
Sbjct: 73 TRPLSK 78
>UniRef50_Q8ABV5 Cluster: 30S ribosomal protein S17 2; n=2;
Bacteroides thetaiotaomicron|Rep: 30S ribosomal protein
S17 2 - Bacteroides thetaiotaomicron
Length = 98
Score = 36.7 bits (81), Expect = 0.29
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = +3
Query: 204 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 383
+ G+V KMQ+T+VI + PKY + + + +H P + +GD V E R
Sbjct: 26 IEGIVVSTKMQKTVVIEVERTKKHPKYGKTVQYTKKYKIH-DP-LEECSVGDRVLAHETR 83
Query: 384 PLSKTVRF 407
SKT F
Sbjct: 84 HFSKTKYF 91
>UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S17 -
Mycoplasma hyopneumoniae (strain 232)
Length = 98
Score = 36.3 bits (80), Expect = 0.39
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 198 RILTGVVQKMKMQRTIV-IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIG 374
+ L G+V + + +V + Y H L RF+KR + + H E+GD V I
Sbjct: 20 KTLQGIVIRTSPKTIMVEVETAYKHKLYA-KRFKKR-KKFNTHDEKNL--AEVGDFVKIA 75
Query: 375 ECRPLSKTVRF 407
ECRP+SKT F
Sbjct: 76 ECRPISKTKHF 86
>UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase
domain-containing protein YALI0D16379g; n=1; Yarrowia
lipolytica|Rep: Patatin-like phospholipase
domain-containing protein YALI0D16379g - Yarrowia
lipolytica (Candida lipolytica)
Length = 818
Score = 36.3 bits (80), Expect = 0.39
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = +3
Query: 126 PREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRH 305
P E V+ YI K +T S+ V K KM T ++ D+ HYL Y++ EKR
Sbjct: 102 PLEPVQKEYITSKHDWTPVFSVLKN--NNSVNKRKMSHT-ALKSDFKHYLDMYDKEEKRR 158
Query: 306 RNMS 317
R S
Sbjct: 159 RGKS 162
>UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12;
Bacteria|Rep: 30S ribosomal protein S17 - Bdellovibrio
bacteriovorus
Length = 89
Score = 35.9 bits (79), Expect = 0.51
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +3
Query: 192 RGRIL--TGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 365
RGR + G V KM +TI + + KY ++ K+ H +IGDIV
Sbjct: 7 RGRKIEVVGEVISDKMDKTISVLIYRMVKHAKYGKYVKKTSVFKAHDEK--NQAKIGDIV 64
Query: 366 TIGECRPLSKTVRF 407
I E RPLSKT R+
Sbjct: 65 KIRETRPLSKTKRW 78
>UniRef50_A3EVR2 Cluster: 30S ribosomal protein S17; n=1;
Leptospirillum sp. Group II UBA|Rep: 30S ribosomal
protein S17 - Leptospirillum sp. Group II UBA
Length = 95
Score = 35.5 bits (78), Expect = 0.68
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 210 GVVQKMKMQRTIV--IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 383
GVV KM +T+V I+R LH P Y++ R + H +E+G +V I R
Sbjct: 20 GVVVGNKMMKTVVVEIQRRVLH--PLYHKVVSRRTRIKAHTQ---EPIEVGSVVEIISTR 74
Query: 384 PLSK 395
P+SK
Sbjct: 75 PISK 78
>UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 232
Score = 35.5 bits (78), Expect = 0.68
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +3
Query: 192 RGR-ILTGVVQKM--KMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 362
RGR GVV ++ K ++I +R Y+P + HR+ H + GD+
Sbjct: 9 RGRQSFVGVVTRLGPKGSKSIKVRVTRRKYMPAILKEINFHRDFYTHDE--MMACQEGDV 66
Query: 363 VTIGECRPLSKTVRF 407
V I +CRP+SKT F
Sbjct: 67 VRIEQCRPISKTKHF 81
>UniRef50_Q50309 Cluster: 30S ribosomal protein S17; n=4;
Bacteria|Rep: 30S ribosomal protein S17 - Mycoplasma
pneumoniae
Length = 85
Score = 35.5 bits (78), Expect = 0.68
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +3
Query: 198 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 377
++L G+V+ K +T ++ + P Y++ RH+ H + GD V I E
Sbjct: 7 KVLIGIVKSTKNAKTATVQVESRFKHPLYHKSVVRHKKYQAHNEGEVL-AKDGDKVQIVE 65
Query: 378 CRPLSKTVRF 407
RPLS T RF
Sbjct: 66 TRPLSATKRF 75
>UniRef50_O06051 Cluster: 30S ribosomal protein S17; n=22;
Bacteria|Rep: 30S ribosomal protein S17 - Mycobacterium
bovis
Length = 135
Score = 35.1 bits (77), Expect = 0.90
Identities = 26/83 (31%), Positives = 37/83 (44%)
Frame = +3
Query: 159 KKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCF 338
K P T R + G V KMQ+TIV+ + P Y + + + + H
Sbjct: 45 KHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSV 104
Query: 339 RDVEIGDIVTIGECRPLSKTVRF 407
IGD V++ E RPLS T R+
Sbjct: 105 --AGIGDRVSLMETRPLSATKRW 125
>UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130;
Bacteria|Rep: 30S ribosomal protein S17 - Azoarcus sp.
(strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 89
Score = 35.1 bits (77), Expect = 0.90
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +3
Query: 198 RILTGVVQKMKMQRTI--VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 371
R L G V KMQ T+ ++ R H L Y + R H+ GD+V I
Sbjct: 10 RALVGRVVSDKMQNTVTVLVERRVKHEL--YGKVITRSAKYHAHVED--GGAAAGDLVEI 65
Query: 372 GECRPLSKT 398
ECRP+SKT
Sbjct: 66 EECRPISKT 74
>UniRef50_Q7UN11 Cluster: 30S ribosomal protein S17; n=4;
Planctomycetaceae|Rep: 30S ribosomal protein S17 -
Rhodopirellula baltica
Length = 117
Score = 34.7 bits (76), Expect = 1.2
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +3
Query: 198 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 377
R++ G+V KM +T + L PKY ++ +R VH + +GD V I E
Sbjct: 4 RVVAGIVTSDKMSKTRRVEIARLVKHPKYKKYIRRRTVCHVHDEN--NESGVGDKVEIIE 61
Query: 378 CRPLSKTVRF 407
PLSK R+
Sbjct: 62 SEPLSKLKRW 71
>UniRef50_Q7NEG1 Cluster: 30S ribosomal protein S17; n=7; cellular
organisms|Rep: 30S ribosomal protein S17 - Gloeobacter
violaceus
Length = 83
Score = 34.7 bits (76), Expect = 1.2
Identities = 23/66 (34%), Positives = 32/66 (48%)
Frame = +3
Query: 210 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 389
G+V MQ+T+V+ + PKY + R R H ++GD V I E PL
Sbjct: 8 GLVVSDAMQKTVVVAVENRVPHPKYKKIVVRTRKFKAHDEE--NRCKVGDRVRILESPPL 65
Query: 390 SKTVRF 407
SKT R+
Sbjct: 66 SKTKRW 71
>UniRef50_Q4SIL0 Cluster: Chromosome 5 SCAF14581, whole genome
shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 5
SCAF14581, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1148
Score = 34.3 bits (75), Expect = 1.6
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -1
Query: 111 DQHS*NVSYPSFSCPPCD*GTPSPVSETLSLSDPPS 4
D HS PS CP G P P+ +TL +PPS
Sbjct: 844 DHHSVRSQSPSSHCPSSPSGNPKPLGDTLRPKEPPS 879
>UniRef50_A3VT29 Cluster: 30S ribosomal protein S17; n=2;
Alphaproteobacteria|Rep: 30S ribosomal protein S17 -
Parvularcula bermudensis HTCC2503
Length = 93
Score = 34.3 bits (75), Expect = 1.6
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3
Query: 198 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 377
RIL G + K ++T+V+R D P + +R + H ++++G V I E
Sbjct: 4 RILQGPIVSDKGEKTVVVRVDRAFKHPLLAKVVRRSKRYHAHDES--NELKVGQRVLIRE 61
Query: 378 CRPLSKTVRF 407
C P SK R+
Sbjct: 62 CPPKSKLKRW 71
>UniRef50_Q62GL4 Cluster: 30S ribosomal protein S17; n=144;
Bacteria|Rep: 30S ribosomal protein S17 - Burkholderia
mallei (Pseudomonas mallei)
Length = 90
Score = 34.3 bits (75), Expect = 1.6
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +3
Query: 198 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 377
R L G V KM +T+ + ++ P Y ++ R + H GD+V I E
Sbjct: 11 RTLVGKVVSNKMDKTVTVLVEHRVKHPIYGKYVVRSKKYHAHDEA--NTYNEGDLVEIQE 68
Query: 378 CRPLSKT 398
RP+SKT
Sbjct: 69 TRPVSKT 75
>UniRef50_Q4FUE7 Cluster: 30S ribosomal protein S17; n=16;
Gammaproteobacteria|Rep: 30S ribosomal protein S17 -
Psychrobacter arcticum
Length = 91
Score = 33.9 bits (74), Expect = 2.1
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +3
Query: 201 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGEC 380
+LTG V KM ++I + + L P Y + +R + H + GD+V I E
Sbjct: 13 VLTGRVVSDKMDKSITVLIERLVRHPLYGKQLRRSTKIKAHDEN--NVCQQGDLVRIKET 70
Query: 381 RPLSKT 398
RP+SKT
Sbjct: 71 RPISKT 76
>UniRef50_Q9HJI5 Cluster: Putative uncharacterized protein Ta0983;
n=1; Thermoplasma acidophilum|Rep: Putative
uncharacterized protein Ta0983 - Thermoplasma
acidophilum
Length = 322
Score = 33.5 bits (73), Expect = 2.7
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +3
Query: 249 IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 377
IRRD L+ + +YNR R + + P F IG+IV IGE
Sbjct: 182 IRRDDLNRIDRYNRIRITGRR--IRMKPLFEVASIGNIVGIGE 222
>UniRef50_Q85FV4 Cluster: Chloroplast 30S ribosomal protein S17;
n=1; Cyanidioschyzon merolae|Rep: Chloroplast 30S
ribosomal protein S17 - Cyanidioschyzon merolae (Red
alga)
Length = 82
Score = 33.5 bits (73), Expect = 2.7
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +3
Query: 204 LTGVVQKMKMQRTIVI--RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 377
L G+V +MQ+T+++ + H L Y + + + +VH P + +G+++ I
Sbjct: 4 LLGLVVSCRMQKTVIVEVKTQVKHAL--YGKRIMKKKRYAVH-DP-EKKASLGELIWIRT 59
Query: 378 CRPLSKTVRF 407
CRP+SKT ++
Sbjct: 60 CRPISKTKKW 69
>UniRef50_Q233G5 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 357
Score = 33.1 bits (72), Expect = 3.6
Identities = 23/94 (24%), Positives = 38/94 (40%)
Frame = +3
Query: 21 EKAFQKQATVFLNRKGGMKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGR 200
+K F T F KGG+ K++ L +K E++ G +R
Sbjct: 103 DKLFVSNDTYFKLMKGGLVCGYCHRPKDLNLDYKKGAESIYQKDFKPHACCKGVPRVRSD 162
Query: 201 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKR 302
G + M+ T V R DY+ + + N+ EK+
Sbjct: 163 FFGGFYTQQPMELTTVHRTDYIPHPLEKNKSEKK 196
>UniRef50_Q6G2X4 Cluster: 30S ribosomal protein S17; n=19;
Alphaproteobacteria|Rep: 30S ribosomal protein S17 -
Bartonella henselae (Rochalimaea henselae)
Length = 79
Score = 33.1 bits (72), Expect = 3.6
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +3
Query: 198 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 377
R+L GVV K +T+V++ + + P + ++ + H +IGD + I E
Sbjct: 4 RVLQGVVVSDKNDKTVVVKVERRYSHPLLKKTVRQSKKYKAHDES--NQFKIGDQIFIQE 61
Query: 378 CRPLSKTVRF 407
+P+SK R+
Sbjct: 62 SKPISKDKRW 71
>UniRef50_UPI0000498A1C Cluster: hypothetical protein 306.t00001;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 306.t00001 - Entamoeba histolytica HM-1:IMSS
Length = 499
Score = 32.7 bits (71), Expect = 4.8
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = +3
Query: 153 IDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY----LPKYNRFEKRHRNMSV 320
+ K C F ++ ++ +I++ +V K+ M ++RR Y + K+ K N
Sbjct: 315 LGKYCYFKDDILLQPQIISAIVSKLSMTDKTILRRGYWMLSNISVSKFPETTKAIINSGA 374
Query: 321 HLSPCFRDVEIGDIVTIGE-CRPLSKTV 401
LS C +E D+ E C L+ T+
Sbjct: 375 FLSSCCTILETNDVKIKSEACWLLANTI 402
>UniRef50_Q97ZH0 Cluster: N(2),N(2)-dimethylguanosine tRNA
methyltransferase (EC 2.1.1.32)
(tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
2,2- dimethylguanosine-26 methyltransferase)
(tRNA(m(2,2)G26)dimethyltransferase); n=2;
Sulfolobus|Rep: N(2),N(2)-dimethylguanosine tRNA
methyltransferase (EC 2.1.1.32)
(tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
2,2- dimethylguanosine-26 methyltransferase)
(tRNA(m(2,2)G26)dimethyltransferase) - Sulfolobus
solfataricus
Length = 378
Score = 32.7 bits (71), Expect = 4.8
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = +3
Query: 48 VFLNRKGGMKRKDMRHSKNVGLGFKTPREAVEGTYIDK----KCPFTGNV-SIRGRILTG 212
+F+ + G ++ D +K++ + PR + T++++ KCP G + SI G + G
Sbjct: 221 LFVRVENGARKADDNINKHLKYFGECPRCGFQ-TFVEENCKTKCPVCGEIFSIIGPLYIG 279
Query: 213 VVQKMKMQRTIVIRRDYLHYLPKYNRFEK 299
+ M+ + I+ +YL +NR +K
Sbjct: 280 PLYSMEFLKRIMDLYSNFNYLTSFNRIQK 308
>UniRef50_Q9PE67 Cluster: 30S ribosomal protein S17; n=52;
Bacteria|Rep: 30S ribosomal protein S17 - Xylella
fastidiosa
Length = 89
Score = 32.7 bits (71), Expect = 4.8
Identities = 21/71 (29%), Positives = 38/71 (53%)
Frame = +3
Query: 186 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 365
+I+GR+++ +QK T+++ R H L Y ++ KR + H + + GD+V
Sbjct: 13 TIKGRVISNKMQKTV---TVLVERQIKHAL--YGKYIKRSTKLHAHDADDLCNE--GDVV 65
Query: 366 TIGECRPLSKT 398
+ E P+SKT
Sbjct: 66 LMTEVAPISKT 76
>UniRef50_Q899R5 Cluster: Conserved protein; n=11; Clostridium|Rep:
Conserved protein - Clostridium tetani
Length = 191
Score = 32.3 bits (70), Expect = 6.3
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 93 HSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRI-LTGVVQKMKMQRT 242
H +N+G F + G+ ++K P GN+SI G + ++G ++ M +Q T
Sbjct: 107 HIQNIGKVFVEDKPLKPGSAVNKDLPPVGNLSITGIVNISGTLEFMVLQNT 157
>UniRef50_Q4HSD8 Cluster: Putative uncharacterized protein; n=1;
Campylobacter upsaliensis RM3195|Rep: Putative
uncharacterized protein - Campylobacter upsaliensis
RM3195
Length = 342
Score = 32.3 bits (70), Expect = 6.3
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +3
Query: 21 EKAFQKQATVFLNRKGGMKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGR 200
EK Q + +N K+ +H + G+ + +E+++ + DKK FTG + + G
Sbjct: 9 EKIIFSQLSTLINGLDCSKQSLEQHKEQEGIVYVKDKESIQSSSTDKKISFTGKI-LNGG 67
Query: 201 IL 206
IL
Sbjct: 68 IL 69
>UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit
S17; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S17 - Schizosaccharomyces
pombe (Fission yeast)
Length = 90
Score = 32.3 bits (70), Expect = 6.3
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +3
Query: 210 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 389
G+V M +T +R + P ++ +++N V + +GD VTI CRP
Sbjct: 7 GIVISRAMPKTAKVRVAKEKFHPVVKKYVTQYQNYMVQDD---LNCNVGDAVTIQPCRPR 63
Query: 390 SKTVRF 407
S T RF
Sbjct: 64 SATKRF 69
>UniRef50_UPI0000DB6FFA Cluster: PREDICTED: similar to Papilin
CG33103-PB, isoform B isoform 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to Papilin CG33103-PB,
isoform B isoform 1 - Apis mellifera
Length = 2807
Score = 31.9 bits (69), Expect = 8.3
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 264 LHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 389
L+ +P+ RF RH+ M + +PC +VE D+ G+C P+
Sbjct: 140 LNCMPRGERFFYRHKLMVIDGTPC--EVEKNDVCVGGKCMPV 179
>UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 147
Score = 31.9 bits (69), Expect = 8.3
Identities = 24/97 (24%), Positives = 37/97 (38%)
Frame = +3
Query: 60 RKGGMKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQR 239
R G +R+D + N G RE V GT+ K TG S G +TG +
Sbjct: 39 RHGIARRRDAQQHGNTSHGHTAAREHVTGTHNSKGSHVTGTHSSTGTHVTGTHGSTETCH 98
Query: 240 TIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVE 350
++ + + + RHR+ H + D E
Sbjct: 99 MDAQQQGNARHRDAQQQGKARHRDPGQHGNTYHMDAE 135
>UniRef50_Q1NPK7 Cluster: 30S ribosomal protein S17; n=2;
Proteobacteria|Rep: 30S ribosomal protein S17 - delta
proteobacterium MLMS-1
Length = 86
Score = 31.9 bits (69), Expect = 8.3
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +3
Query: 192 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 371
R + G+V KM++TIVI Y ++ +R + ++GD V I
Sbjct: 7 RKKTQEGLVISNKMEKTIVIETTRFTPHKLYGKYIRRR--VKYLADDPEGTCQVGDRVLI 64
Query: 372 GECRPLSKTVRF 407
ECRPLS+ R+
Sbjct: 65 EECRPLSRRKRW 76
>UniRef50_Q2PBA5 Cluster: Putative H3K9 methyltransferase; n=1;
Drosophila nasutoides|Rep: Putative H3K9
methyltransferase - Drosophila nasutoides
Length = 640
Score = 31.9 bits (69), Expect = 8.3
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +3
Query: 192 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 371
RGRI V+++++MQR+ +RR L L K+ + H N SP R V D+ +I
Sbjct: 336 RGRIEERVLRRLQMQRSCHLRRKQLQKLAKF----EAHMNTVEQPSPPIRVVNDSDLDSI 391
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 472,546,021
Number of Sequences: 1657284
Number of extensions: 9856947
Number of successful extensions: 24663
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 23927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24610
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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