Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_E07
         (309 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   0.55 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   2.2  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     19   9.0  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    19   9.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    19   9.0  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    19   9.0  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    19   9.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    19   9.0  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           19   9.0  

>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.4 bits (48), Expect = 0.55
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1

Query: 165 NSLEDVSSSAALIQQSTTVKNKDIRKFLDGLY 70
           N+L    S+ AL+      K+  I++FL G+Y
Sbjct: 94  NTLNTCRSALALLLSPEVGKDHRIKRFLRGVY 125


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 194 LGELTTVTPGAIFTLLMYFSPRKLRISIIVF 286
           L    ++TP   F   +  SPR  +IS I F
Sbjct: 19  LSHFLSITPNYDFENFVIISPRCDKISAICF 49


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 152 SSNEFPSMISSSFCLGELTTVTP 220
           S N  P + SSS  L  L  +TP
Sbjct: 115 SLNTQPPVTSSSNILQNLADITP 137


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 152 SSNEFPSMISSSFCLGELTTVTP 220
           S N  P + SSS  L  L  +TP
Sbjct: 115 SLNTQPPVTSSSNILQNLADITP 137


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 154 RCIQFSCPDPTIND 113
           R I+  CP+PT ++
Sbjct: 83  RSIKNECPEPTCDE 96


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 148 YIF**VSFYDQFILLF 195
           Y F  +  Y QFIL F
Sbjct: 133 YAFEYIQLYSQFILYF 148


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 148 YIF**VSFYDQFILLF 195
           Y F  +  Y QFIL F
Sbjct: 133 YAFEYIQLYSQFILYF 148


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 148 YIF**VSFYDQFILLF 195
           Y F  +  Y QFIL F
Sbjct: 453 YAFEYIQLYSQFILYF 468


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 152 SSNEFPSMISSSFCLGELTTVTP 220
           S N  P + SSS  L  L  +TP
Sbjct: 115 SLNTQPPVTSSSNILQNLADITP 137


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,212
Number of Sequences: 336
Number of extensions: 1386
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5624413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)