Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_E06
(488 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 37 0.007
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 37 0.007
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 34 0.048
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 34 0.064
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 33 0.084
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 33 0.084
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 33 0.084
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 33 0.084
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 33 0.084
Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical pr... 32 0.19
U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical pr... 30 0.78
AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical ... 30 0.78
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 30 1.0
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 30 1.0
Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical p... 29 1.4
Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 29 1.4
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 29 1.4
Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 29 1.4
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 29 1.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 1.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 1.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 1.4
Z69661-6|CAA93492.4| 299|Caenorhabditis elegans Hypothetical pr... 29 1.8
AL031633-20|CAC42372.2| 497|Caenorhabditis elegans Hypothetical... 29 2.4
AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical ... 29 2.4
Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z81560-8|CAN86623.1| 173|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p... 28 3.2
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr... 28 3.2
U40427-1|AAA81467.2| 798|Caenorhabditis elegans Hypothetical pr... 28 4.2
AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical ... 28 4.2
Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical pr... 27 5.5
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 27 5.5
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 27 5.5
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 27 5.5
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 27 5.5
AC006651-12|AAM48541.1| 231|Caenorhabditis elegans Hypothetical... 27 5.5
AC006651-11|AAM48540.1| 428|Caenorhabditis elegans Hypothetical... 27 5.5
AC006651-10|AAF39866.2| 456|Caenorhabditis elegans Hypothetical... 27 5.5
Z83120-1|CAB05583.1| 837|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z81083-3|CAB03104.1| 559|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 27 7.3
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 27 7.3
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z81036-3|CAB02741.1| 357|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 27 9.7
U50309-6|AAG24134.1| 247|Caenorhabditis elegans Hypothetical pr... 27 9.7
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 27 9.7
AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical... 27 9.7
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 37.1 bits (82), Expect = 0.007
Identities = 26/108 (24%), Positives = 48/108 (44%)
Frame = +3
Query: 144 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDA 323
++DL+K F + ++ + I K+ S+N ++ DS+ +++SE+ +L+
Sbjct: 153 VEDLQKQVSSFMSQMQDKNSEIQKMKDAISVNDVSRQNMDSLSEKLSEMDRTLREE---- 208
Query: 324 NGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTVIQNTL 467
QQ + L E L+ A E + L +KL QN L
Sbjct: 209 --------QQQKSQLRSQTETLKNALSTSESTLSMLKDKLAQFEQNAL 248
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 37.1 bits (82), Expect = 0.007
Identities = 26/108 (24%), Positives = 48/108 (44%)
Frame = +3
Query: 144 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDA 323
++DL+K F + ++ + I K+ S+N ++ DS+ +++SE+ +L+
Sbjct: 153 VEDLQKQVSSFMSQMQDKNSEIQKMKDAISVNDVSRQNMDSLSEKLSEMDRTLREE---- 208
Query: 324 NGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTVIQNTL 467
QQ + L E L+ A E + L +KL QN L
Sbjct: 209 --------QQQKSQLRSQTETLKNALSTSESTLSMLKDKLAQFEQNAL 248
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical protein
T06E4.1 protein.
Length = 1295
Score = 34.3 bits (75), Expect = 0.048
Identities = 24/114 (21%), Positives = 56/114 (49%)
Frame = +3
Query: 144 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDA 323
L E Q+ Q ++ + N++ ++ LKE +++ ++S S + ++ DA
Sbjct: 746 LHSAESTNQELQVSLEMLKIEVSNARQKVMESEVLKESFEALQLELSA-SQEVSRSVVDA 804
Query: 324 NGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTVIQNTLKESQNL 485
+ K+ L + L+ +ED K+ D+++ + ++LQ +QN + ++ L
Sbjct: 805 AVQEKDGLLRLVDTLKLKIEDTEKSAQDLQQSSVEEIKQLQLDLQNFKQNAEVL 858
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 33.9 bits (74), Expect = 0.064
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Frame = +3
Query: 144 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQ---VSELSNSLQGAL 314
L++LE +A+ + + EQ N +K + L K+LK + + V+EL LQ
Sbjct: 111 LKELENNAEALKTQLQEQTNDAKKAK--DELQKSLKSAAARATEATTAVAELQAKLQTVE 168
Query: 315 TDANGK---AKEVLQQARQNLERTVEDLRKAHPDVEK 416
+ + AKE L +QN ER +L+K ++++
Sbjct: 169 KEHKKEIEDAKEALAAEKQNSEREKMELKKLTEELQR 205
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 33.5 bits (73), Expect = 0.084
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 13/120 (10%)
Frame = +3
Query: 105 HGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVS 284
H R + ++ L++ +D Q ISE + N + + S KA + SD + +++
Sbjct: 1097 HSVSSRLEDEQALVSKLQRQIKDGQSRISELEEELENERQSRS--KADRAKSD-LQRELE 1153
Query: 285 ELSNSL--QGALTDAN-----------GKAKEVLQQARQNLERTVEDLRKAHPDVEKQAT 425
EL L QG T A K + L++A N E + LRK H D + T
Sbjct: 1154 ELGEKLDEQGGATAAQVEVNKKREAELAKLRRDLEEANMNHENQLGGLRKKHTDAVAELT 1213
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 33.5 bits (73), Expect = 0.084
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 13/120 (10%)
Frame = +3
Query: 105 HGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVS 284
H R + ++ L++ +D Q ISE + N + + S KA + SD + +++
Sbjct: 1097 HSVSSRLEDEQALVSKLQRQIKDGQSRISELEEELENERQSRS--KADRAKSD-LQRELE 1153
Query: 285 ELSNSL--QGALTDAN-----------GKAKEVLQQARQNLERTVEDLRKAHPDVEKQAT 425
EL L QG T A K + L++A N E + LRK H D + T
Sbjct: 1154 ELGEKLDEQGGATAAQVEVNKKREAELAKLRRDLEEANMNHENQLGGLRKKHTDAVAELT 1213
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform b protein.
Length = 4034
Score = 33.5 bits (73), Expect = 0.084
Identities = 23/111 (20%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Frame = +3
Query: 150 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 329
+ K+ D +K + +++ S N ++ + + + S+ Q ++ L + +
Sbjct: 1904 NFSKNISDSEKAVFSNLISVITSHNLSTIGTSSETTTASISYQ--DIPEMLAASKLWISR 1961
Query: 330 KAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTVIQ--NTLKES 476
++++ ++ R+ + +TVE D EK A L+EK+ ++ NTL S
Sbjct: 1962 NSEKLKKEIREPVIQTVESFWNTTNDQEKVAVLLNEKIDSIYSSLNTLAAS 2012
Score = 29.9 bits (64), Expect = 1.0
Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Frame = +3
Query: 171 DFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQ 350
D+++ I Q + I+ T + KA SD + + + + K K +L
Sbjct: 3404 DYRRKIFNQNSEIIFGDLTRDVVKAAFSVSDETLNTLFSQLEQSDWSQIKLSSKQKSILS 3463
Query: 351 Q-----ARQNLERTVEDLRKAHPDVEKQATALHEKLQTVIQNTLKESQ 479
A NL+ + L D E+ +L E+ ++NT K Q
Sbjct: 3464 ANIKSLATSNLDTLIGQLMPREADSEQSEASLSERSSVEMENTFKIQQ 3511
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 33.5 bits (73), Expect = 0.084
Identities = 23/111 (20%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Frame = +3
Query: 150 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 329
+ K+ D +K + +++ S N ++ + + + S+ Q ++ L + +
Sbjct: 1904 NFSKNISDSEKAVFSNLISVITSHNLSTIGTSSETTTASISYQ--DIPEMLAASKLWISR 1961
Query: 330 KAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTVIQ--NTLKES 476
++++ ++ R+ + +TVE D EK A L+EK+ ++ NTL S
Sbjct: 1962 NSEKLKKEIREPVIQTVESFWNTTNDQEKVAVLLNEKIDSIYSSLNTLAAS 2012
Score = 29.9 bits (64), Expect = 1.0
Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Frame = +3
Query: 171 DFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQ 350
D+++ I Q + I+ T + KA SD + + + + K K +L
Sbjct: 3404 DYRRKIFNQNSEIIFGDLTRDVVKAAFSVSDETLNTLFSQLEQSDWSQIKLSSKQKSILS 3463
Query: 351 Q-----ARQNLERTVEDLRKAHPDVEKQATALHEKLQTVIQNTLKESQ 479
A NL+ + L D E+ +L E+ ++NT K Q
Sbjct: 3464 ANIKSLATSNLDTLIGQLMPREADSEQSEASLSERSSVEMENTFKIQQ 3511
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 33.5 bits (73), Expect = 0.084
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 13/120 (10%)
Frame = +3
Query: 105 HGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVS 284
H R + ++ L++ +D Q ISE + N + + S KA + SD + +++
Sbjct: 1100 HSVSSRLEDEQALVSKLQRQIKDGQSRISELEEELENERQSRS--KADRAKSD-LQRELE 1156
Query: 285 ELSNSL--QGALTDAN-----------GKAKEVLQQARQNLERTVEDLRKAHPDVEKQAT 425
EL L QG T A K + L++A N E + LRK H D + T
Sbjct: 1157 ELGEKLDEQGGATAAQVEVNKKREAELAKLRRDLEEANMNHENQLGGLRKKHTDAVAELT 1216
>Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical
protein T28C6.7 protein.
Length = 459
Score = 32.3 bits (70), Expect = 0.19
Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +3
Query: 138 TILQDLEKHAQDFQKTISEQFNAIVNSKNTE-SLNKALKEGSDSMVQQVSELSNSLQGAL 314
T L+D+ +D + + E+ + + +S+N E N L++ + ++V +L+ L +
Sbjct: 268 TTLEDINGKYEDERDRLQEEVDTLRSSRNWEIEQNALLRDQVAHLKEKVHKLTTELDASE 327
Query: 315 TDANGKAKEVLQQARQNLERTVEDLRKA 398
+ EV ++++ +E VEDL +A
Sbjct: 328 VAKRSLSSEV-DESKKLMELMVEDLLQA 354
>U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical
protein F59C12.3 protein.
Length = 519
Score = 30.3 bits (65), Expect = 0.78
Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Frame = +3
Query: 78 VLFACVALAHGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEG 257
+L +A + + +R+ L + HA + +K ++E + +A E
Sbjct: 262 MLEKALANSQERLAKREKKCEELSAVVAHADELRKQLNEVWEEQHRRDQMVESERAQWEM 321
Query: 258 SDSMVQQVSELSNSLQGAL--TDANGKAKEVLQQAR---------QNLERTVEDLRKAHP 404
+ ++ SL G+L T G +++++ + Q LER V DLRK H
Sbjct: 322 EKTQLRMQLNKDTSLTGSLKRTTTPGSTEDLIRMRKSIQSKDDKIQQLERMVNDLRKTHG 381
Query: 405 DVEKQ 419
D +Q
Sbjct: 382 DKTEQ 386
>AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical
protein T20H9.6 protein.
Length = 758
Score = 30.3 bits (65), Expect = 0.78
Identities = 12/44 (27%), Positives = 27/44 (61%)
Frame = +3
Query: 327 GKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTVIQ 458
GKA + L+ + N++ + E +R+ D+ K+ T +H K+ +++
Sbjct: 359 GKALQTLKTVQTNVQDSNESIRRGENDMLKEITDVHSKVIRLVK 402
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 29.9 bits (64), Expect = 1.0
Identities = 23/89 (25%), Positives = 40/89 (44%)
Frame = +3
Query: 219 KNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKA 398
KN + + A KE + +Q++ + L+ + K LQQA Q+ + LR
Sbjct: 636 KNALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSSSVEQALRA- 694
Query: 399 HPDVEKQATALHEKLQTVIQNTLKESQNL 485
++EK L E + +QN+ K Q +
Sbjct: 695 --EIEKLEAKLQEIEKAKMQNSSKREQKV 721
Score = 28.7 bits (61), Expect = 2.4
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Frame = +3
Query: 156 EKHAQDFQKT-ISEQFNAI--VNSKNTESLNKALKEGSDSM--VQQVSELSNSLQGALTD 320
E A + +K+ + EQ + + V++ E + K K M + + +E + L
Sbjct: 304 ELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLAG 363
Query: 321 ANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTVIQNTLKESQNLA 488
AKE L+ + ++ + A D EK+ L E+L+ Q+ L+ SQ LA
Sbjct: 364 ELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERA-QSALESSQELA 418
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 29.9 bits (64), Expect = 1.0
Identities = 23/89 (25%), Positives = 40/89 (44%)
Frame = +3
Query: 219 KNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKA 398
KN + + A KE + +Q++ + L+ + K LQQA Q+ + LR
Sbjct: 636 KNALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSSSVEQALRA- 694
Query: 399 HPDVEKQATALHEKLQTVIQNTLKESQNL 485
++EK L E + +QN+ K Q +
Sbjct: 695 --EIEKLEAKLQEIEKAKMQNSSKREQKV 721
Score = 28.7 bits (61), Expect = 2.4
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Frame = +3
Query: 156 EKHAQDFQKT-ISEQFNAI--VNSKNTESLNKALKEGSDSM--VQQVSELSNSLQGALTD 320
E A + +K+ + EQ + + V++ E + K K M + + +E + L
Sbjct: 304 ELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLAG 363
Query: 321 ANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTVIQNTLKESQNLA 488
AKE L+ + ++ + A D EK+ L E+L+ Q+ L+ SQ LA
Sbjct: 364 ELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERA-QSALESSQELA 418
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 29.9 bits (64), Expect = 1.0
Identities = 26/117 (22%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Frame = +3
Query: 93 VALAHGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAI------VNSKNTESLNKALKE 254
+A + A D N +L + E+ A+ + + ++ +A K ES+N+ L+E
Sbjct: 1331 IANINRARQLEDEKNALLDEKEE-AEGLRAHLEKEIHAARQGAGEARRKAEESVNQQLEE 1389
Query: 255 GSDSMVQQVSELSNSLQGALTDANG--KAKEVLQQARQNLERTVEDLRKAHPDVEKQ 419
++ V L L+ + ++K+ +QQ ++ +E++R +H D EK+
Sbjct: 1390 LRKKNLRDVEHLQKQLEESEVAKERILQSKKKIQQELEDSSMELENVRASHRDSEKR 1446
>Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = +3
Query: 165 AQDFQKTISEQFNAIVNSKN--TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 338
A+D+ + ++ + + +S T + +LKE + +L+N + A+ D AK
Sbjct: 107 AKDYVEDAKDKASDVWDSAKDKTSDVFDSLKEHGEDASDSAKDLANDAEDAIKDTYDSAK 166
Query: 339 EVLQQARQNLERTVEDLRKAHPDVEKQA 422
E A + + ED +++ + +QA
Sbjct: 167 EKASDAFDSAKEHGEDAQESAKEYFEQA 194
>Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = +3
Query: 165 AQDFQKTISEQFNAIVNSKN--TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 338
A+D+ + ++ + + +S T + +LKE + +L+N + A+ D AK
Sbjct: 107 AKDYVEDAKDKASDVWDSAKDKTSDVFDSLKEHGEDASDSAKDLANDAEDAIKDTYDSAK 166
Query: 339 EVLQQARQNLERTVEDLRKAHPDVEKQA 422
E A + + ED +++ + +QA
Sbjct: 167 EKASDAFDSAKEHGEDAQESAKEYFEQA 194
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 29.5 bits (63), Expect = 1.4
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Frame = +3
Query: 15 DLATSLRTRTDSDTA--MAAKCFVLFACVALAHGAMVRRDAPNTILQDLEKHAQDFQKTI 188
D A +L+ R SD A +A C L + + A A + + LQ+ EK +K +
Sbjct: 402 DNAITLKIRGMSDKARMIAKNCAELQSNLRTAQEAATKIEVEMKTLQN-EK--VKLEKEV 458
Query: 189 SEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNL 368
+ I +N + K L + +++ + +++L + ALT+ K ++ L+Q
Sbjct: 459 EQLKFKIKQGQNATAGMKDLLKKEEALRKSLADLPLLDENALTECKLKREKYLKQLDILK 518
Query: 369 ERTVEDLRKAHPDVEKQA 422
++ E + A D EK++
Sbjct: 519 KKCAEAEKNAEKDREKES 536
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 29.5 bits (63), Expect = 1.4
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Frame = +3
Query: 15 DLATSLRTRTDSDTA--MAAKCFVLFACVALAHGAMVRRDAPNTILQDLEKHAQDFQKTI 188
D A +L+ R SD A +A C L + + A A + + LQ+ EK +K +
Sbjct: 388 DNAITLKIRGMSDKARMIAKNCAELQSNLRTAQEAATKIEVEMKTLQN-EK--VKLEKEV 444
Query: 189 SEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNL 368
+ I +N + K L + +++ + +++L + ALT+ K ++ L+Q
Sbjct: 445 EQLKFKIKQGQNATAGMKDLLKKEEALRKSLADLPLLDENALTECKLKREKYLKQLDILK 504
Query: 369 ERTVEDLRKAHPDVEKQA 422
++ E + A D EK++
Sbjct: 505 KKCAEAEKNAEKDREKES 522
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 29.5 bits (63), Expect = 1.4
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Frame = +3
Query: 15 DLATSLRTRTDSDTA--MAAKCFVLFACVALAHGAMVRRDAPNTILQDLEKHAQDFQKTI 188
D A +L+ R SD A +A C L + + A A + + LQ+ EK +K +
Sbjct: 388 DNAITLKIRGMSDKARMIAKNCAELQSNLRTAQEAATKIEVEMKTLQN-EK--VKLEKEV 444
Query: 189 SEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNL 368
+ I +N + K L + +++ + +++L + ALT+ K ++ L+Q
Sbjct: 445 EQLKFKIKQGQNATAGMKDLLKKEEALRKSLADLPLLDENALTECKLKREKYLKQLDILK 504
Query: 369 ERTVEDLRKAHPDVEKQA 422
++ E + A D EK++
Sbjct: 505 KKCAEAEKNAEKDREKES 522
>Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = +3
Query: 165 AQDFQKTISEQFNAIVNSKN--TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 338
A+D+ + ++ + + +S T + +LKE + +L+N + A+ D AK
Sbjct: 107 AKDYVEDAKDKASDVWDSAKDKTSDVFDSLKEHGEDASDSAKDLANDAEDAIKDTYDSAK 166
Query: 339 EVLQQARQNLERTVEDLRKAHPDVEKQA 422
E A + + ED +++ + +QA
Sbjct: 167 EKASDAFDSAKEHGEDAQESAKEYFEQA 194
>Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = +3
Query: 165 AQDFQKTISEQFNAIVNSKN--TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 338
A+D+ + ++ + + +S T + +LKE + +L+N + A+ D AK
Sbjct: 107 AKDYVEDAKDKASDVWDSAKDKTSDVFDSLKEHGEDASDSAKDLANDAEDAIKDTYDSAK 166
Query: 339 EVLQQARQNLERTVEDLRKAHPDVEKQA 422
E A + + ED +++ + +QA
Sbjct: 167 EKASDAFDSAKEHGEDAQESAKEYFEQA 194
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.5 bits (63), Expect = 1.4
Identities = 27/86 (31%), Positives = 42/86 (48%)
Frame = +3
Query: 228 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPD 407
E L K KE + V+Q+ E+ L+ L + KE+ Q LE+ +EDLRK H
Sbjct: 338 EHLEKQRKEAWEK-VEQLQEMLGELEAELD----RQKELKLQ----LEKDMEDLRKEH-- 386
Query: 408 VEKQATALHEKLQTVIQNTLKESQNL 485
E Q L ++L+ V + + + L
Sbjct: 387 -EGQMAELEKRLEKVSEKEKEAIEQL 411
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.5 bits (63), Expect = 1.4
Identities = 27/86 (31%), Positives = 42/86 (48%)
Frame = +3
Query: 228 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPD 407
E L K KE + V+Q+ E+ L+ L + KE+ Q LE+ +EDLRK H
Sbjct: 338 EHLEKQRKEAWEK-VEQLQEMLGELEAELD----RQKELKLQ----LEKDMEDLRKEH-- 386
Query: 408 VEKQATALHEKLQTVIQNTLKESQNL 485
E Q L ++L+ V + + + L
Sbjct: 387 -EGQMAELEKRLEKVSEKEKEAIEQL 411
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 1.4
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +2
Query: 302 TGCVDRRKR*S*GSAPTSSPELGAHSRGSP-QGAPRRRETSHRITREAANRHPEHTKGEP 478
TG R+KR + PT SP G+ G P +G P + E+S R T G P
Sbjct: 438 TGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESSESREGPRGPRRSPPT-GSP 496
Query: 479 EPG 487
G
Sbjct: 497 PTG 499
Score = 27.1 bits (57), Expect = 7.3
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = +2
Query: 338 GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPG 487
GS PT SP G RGSP R R+A P G P G
Sbjct: 414 GSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRP---TGSPPTG 460
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 1.4
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +2
Query: 302 TGCVDRRKR*S*GSAPTSSPELGAHSRGSP-QGAPRRRETSHRITREAANRHPEHTKGEP 478
TG R+KR + PT SP G+ G P +G P + E+S R T G P
Sbjct: 459 TGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESSESREGPRGPRRSPPT-GSP 517
Query: 479 EPG 487
G
Sbjct: 518 PTG 520
Score = 27.1 bits (57), Expect = 7.3
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = +2
Query: 338 GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPG 487
GS PT SP G RGSP R R+A P G P G
Sbjct: 435 GSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRP---TGSPPTG 481
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 1.4
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +2
Query: 302 TGCVDRRKR*S*GSAPTSSPELGAHSRGSP-QGAPRRRETSHRITREAANRHPEHTKGEP 478
TG R+KR + PT SP G+ G P +G P + E+S R T G P
Sbjct: 444 TGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESSESREGPRGPRRSPPT-GSP 502
Query: 479 EPG 487
G
Sbjct: 503 PTG 505
Score = 27.1 bits (57), Expect = 7.3
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = +2
Query: 338 GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPG 487
GS PT SP G RGSP R R+A P G P G
Sbjct: 420 GSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRP---TGSPPTG 466
>Z69661-6|CAA93492.4| 299|Caenorhabditis elegans Hypothetical
protein F48F7.2 protein.
Length = 299
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +3
Query: 309 ALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTVIQNTLKESQ 479
ALT A+ + K +L+ + R DLRK E +++Q+V + ++++Q
Sbjct: 63 ALTIADPRDKNILENQIGTIRRRTGDLRKLVRQAEDDFLEFTKQVQSVTEKRMRQNQ 119
>AL031633-20|CAC42372.2| 497|Caenorhabditis elegans Hypothetical
protein Y39A1A.23 protein.
Length = 497
Score = 28.7 bits (61), Expect = 2.4
Identities = 24/123 (19%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Frame = +3
Query: 126 DAPNTILQD-LEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSL 302
D IL++ + +H ++ K+ + ++ SK ++ + ++ S + +S+ +
Sbjct: 282 DLDGGILKETMAQHEEEEDKSTAHSSSSRRKSKAIDTSSSGTQK-SKKCSESLSQEETTR 340
Query: 303 QGALTDANGKAKE--VLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTVIQNTLKES 476
+L N E V +Q+ ++ E TV + R+ PD++ + Q ++ T+KE
Sbjct: 341 SQSLPSRNRFVPEIPVAEQSWRDREVTVYEQREPSPDLQIVEEVMEIDNQPIVTRTIKEE 400
Query: 477 QNL 485
++
Sbjct: 401 HSV 403
>AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical
protein Y54E10A.12 protein.
Length = 547
Score = 28.7 bits (61), Expect = 2.4
Identities = 23/110 (20%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Frame = +3
Query: 135 NTILQDLEKHAQDFQKTISEQFNAIVNSKNTES------LNKALKEGSDSMVQQVSELSN 296
N ++ +K ++F+K + N+I+ ++ S N ++ D+ +Q+++E
Sbjct: 67 NRKAENYQKKWKNFEKESILKLNSIMEKISSHSQPSHHHTNASITLPYDATIQKIAEKEK 126
Query: 297 SLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQ 446
+L L + + L++ + + E+T L K +EK L E+ Q
Sbjct: 127 NLSKLLKELS-IVDSSLKEEKASFEKTQSALLKEKGKIEKDKLMLREEAQ 175
>Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical
protein C17H1.9 protein.
Length = 353
Score = 28.3 bits (60), Expect = 3.2
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Frame = +3
Query: 177 QKTISEQFNAIVNSKNT--ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQ 350
++ + Q+N+ V +N E K++++ ++ +++L L+ KEV Q
Sbjct: 54 RENMLRQWNSSVAERNAAEEIHRKSVEKFNEEHKTYMAKLEKQLEKINEKGEQDVKEVEQ 113
Query: 351 QARQNLERTVEDLRKAHPDVEKQATALHEKL--QTVIQNTLK 470
Q + E+ EDL K H + + ++++ Q V Q+ LK
Sbjct: 114 QRVKLEEQRTEDLVKHHESMANLSEKKYKEIEKQRVEQHMLK 155
>Z81560-8|CAN86623.1| 173|Caenorhabditis elegans Hypothetical
protein K02E2.8b protein.
Length = 173
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 259 PTPWCSRSPSYPTVYRVR*PTQTVKLRKC 345
PT WC+ S S+P ++R R P +T +C
Sbjct: 78 PTDWCAISGSFPIMFR-RYPEETTADAQC 105
>Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical
protein K02E2.8a protein.
Length = 188
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 259 PTPWCSRSPSYPTVYRVR*PTQTVKLRKC 345
PT WC+ S S+P ++R R P +T +C
Sbjct: 93 PTDWCAISGSFPIMFR-RYPEETTADAQC 120
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +2
Query: 344 APTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEP 484
+P+ S R SP APRRR++ R R P + P
Sbjct: 469 SPSGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSPSSSSRSRSP 515
Score = 26.6 bits (56), Expect = 9.7
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = +1
Query: 262 TPWCSRSPSYPTVYRVR*PTQTVKLRKCSNKLARTWSAQSRISARRTPTSRNKPPHYTRS 441
+P S+SP P R R P+Q+ K +R+ S + RR+P++ PP +
Sbjct: 307 SPSASKSP--PPARRRRSPSQS-KSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKR 363
Query: 442 CKPSSRTH*RRAR 480
K S++ R R
Sbjct: 364 AKSRSKSPPARRR 376
>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
protein F02E9.4b protein.
Length = 1507
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 347 PTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPE 460
P+ P + A S G PQ PR+++ R R + PE
Sbjct: 244 PSVPPVVPATSAGCPQREPRQQQGGRRQNRPGRRKKPE 281
>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical
protein F02E9.4a protein.
Length = 1505
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 347 PTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPE 460
P+ P + A S G PQ PR+++ R R + PE
Sbjct: 244 PSVPPVVPATSAGCPQREPRQQQGGRRQNRPGRRKKPE 281
>U40427-1|AAA81467.2| 798|Caenorhabditis elegans Hypothetical
protein F43C9.3 protein.
Length = 798
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +3
Query: 213 NSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLR 392
++ N NKAL + + Q++ E+SN ++ A + R+ V+++
Sbjct: 105 SNSNLSKFNKALSMSTSHLTQEIEEISNKRLSMALPSSSAAPFITSLKRRETFTKVDEIT 164
Query: 393 K 395
K
Sbjct: 165 K 165
>AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical
protein Y39G10AR.10 protein.
Length = 690
Score = 27.9 bits (59), Expect = 4.2
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 10/107 (9%)
Frame = +3
Query: 141 ILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALT- 317
+L + E+ A Q+T SE+ N + +++ + N LKE + + + S Q ALT
Sbjct: 68 MLDEAEEKASSAQETTSEENNLKILNRDLVAENLELKEMKEELRKIWLSDSKKFQEALTR 127
Query: 318 --DANGKAKE-------VLQQARQNLERTVEDLRKAHPDVEKQATAL 431
D N K ++ + Q A+ L+ E+L K + E+ + +
Sbjct: 128 ISDENTKLQKDCHELESIRQCAQFALDNCNEELEKTQTENEEHESRI 174
>Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical
protein C33D9.9 protein.
Length = 310
Score = 27.5 bits (58), Expect = 5.5
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 186 ISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK-EVLQQ 353
I+ N + N + + + KALKE + Q+S+L+ LQG L + + + K E LQQ
Sbjct: 250 IASMKNCLKNEE-IQKMQKALKEKDE----QISKLTEQLQGLLINRDKETKVEDLQQ 301
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 27.5 bits (58), Expect = 5.5
Identities = 21/90 (23%), Positives = 45/90 (50%)
Frame = +3
Query: 150 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 329
DLE+ ++ + +S+ N K + + ++ + + + S++S L+D +
Sbjct: 1099 DLERRIRELEDELSQIGRG--NDKTENDITELKRKHAAEIDKLKSDISALHDKHLSDLDD 1156
Query: 330 KAKEVLQQARQNLERTVEDLRKAHPDVEKQ 419
+ KE +A +NL+ +DLR ++EKQ
Sbjct: 1157 E-KEQYGKAVENLKSVEDDLRDKLNNLEKQ 1185
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 27.5 bits (58), Expect = 5.5
Identities = 21/90 (23%), Positives = 45/90 (50%)
Frame = +3
Query: 150 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 329
DLE+ ++ + +S+ N K + + ++ + + + S++S L+D +
Sbjct: 1172 DLERRIRELEDELSQIGRG--NDKTENDITELKRKHAAEIDKLKSDISALHDKHLSDLDD 1229
Query: 330 KAKEVLQQARQNLERTVEDLRKAHPDVEKQ 419
+ KE +A +NL+ +DLR ++EKQ
Sbjct: 1230 E-KEQYGKAVENLKSVEDDLRDKLNNLEKQ 1258
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 27.5 bits (58), Expect = 5.5
Identities = 21/90 (23%), Positives = 45/90 (50%)
Frame = +3
Query: 150 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 329
DLE+ ++ + +S+ N K + + ++ + + + S++S L+D +
Sbjct: 1172 DLERRIRELEDELSQIGRG--NDKTENDITELKRKHAAEIDKLKSDISALHDKHLSDLDD 1229
Query: 330 KAKEVLQQARQNLERTVEDLRKAHPDVEKQ 419
+ KE +A +NL+ +DLR ++EKQ
Sbjct: 1230 E-KEQYGKAVENLKSVEDDLRDKLNNLEKQ 1258
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +2
Query: 368 GAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEP 484
G H +G PQ P H +R PEH G P P
Sbjct: 126 GHHFQGPPQHFPPGPPRPHFPGPPGPHRPPEHYPGPPRP 164
>AC006651-12|AAM48541.1| 231|Caenorhabditis elegans Hypothetical
protein H06I04.1c protein.
Length = 231
Score = 27.5 bits (58), Expect = 5.5
Identities = 31/136 (22%), Positives = 53/136 (38%), Gaps = 10/136 (7%)
Frame = +3
Query: 111 AMVRRDAPNTILQDLEK---------HAQDF-QKTISEQFNAIVNSKNTESLNKALKEGS 260
A+ R+ PN +L+ K QD K I E N ++ + + +L++
Sbjct: 74 ALSRQQIPNDLLEKTRKIDFSEAKNAKNQDLIDKLIDENENLQISLNREQKMTSSLQDDL 133
Query: 261 DSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEK 440
+ + V + ++ L GKA+ Q +L +T DL E LHE
Sbjct: 134 EKSRRMVIDRDEHIE-ELKMKLGKAETKASQCESDLTQTSSDLAMERLRCEVLTGELHE- 191
Query: 441 LQTVIQNTLKESQNLA 488
+ + +NT Q A
Sbjct: 192 IDGIFRNTQSTIQAYA 207
>AC006651-11|AAM48540.1| 428|Caenorhabditis elegans Hypothetical
protein H06I04.1b protein.
Length = 428
Score = 27.5 bits (58), Expect = 5.5
Identities = 31/136 (22%), Positives = 53/136 (38%), Gaps = 10/136 (7%)
Frame = +3
Query: 111 AMVRRDAPNTILQDLEK---------HAQDF-QKTISEQFNAIVNSKNTESLNKALKEGS 260
A+ R+ PN +L+ K QD K I E N ++ + + +L++
Sbjct: 271 ALSRQQIPNDLLEKTRKIDFSEAKNAKNQDLIDKLIDENENLQISLNREQKMTSSLQDDL 330
Query: 261 DSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEK 440
+ + V + ++ L GKA+ Q +L +T DL E LHE
Sbjct: 331 EKSRRMVIDRDEHIE-ELKMKLGKAETKASQCESDLTQTSSDLAMERLRCEVLTGELHE- 388
Query: 441 LQTVIQNTLKESQNLA 488
+ + +NT Q A
Sbjct: 389 IDGIFRNTQSTIQAYA 404
>AC006651-10|AAF39866.2| 456|Caenorhabditis elegans Hypothetical
protein H06I04.1a protein.
Length = 456
Score = 27.5 bits (58), Expect = 5.5
Identities = 31/136 (22%), Positives = 53/136 (38%), Gaps = 10/136 (7%)
Frame = +3
Query: 111 AMVRRDAPNTILQDLEK---------HAQDF-QKTISEQFNAIVNSKNTESLNKALKEGS 260
A+ R+ PN +L+ K QD K I E N ++ + + +L++
Sbjct: 271 ALSRQQIPNDLLEKTRKIDFSEAKNAKNQDLIDKLIDENENLQISLNREQKMTSSLQDDL 330
Query: 261 DSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEK 440
+ + V + ++ L GKA+ Q +L +T DL E LHE
Sbjct: 331 EKSRRMVIDRDEHIE-ELKMKLGKAETKASQCESDLTQTSSDLAMERLRCEVLTGELHE- 388
Query: 441 LQTVIQNTLKESQNLA 488
+ + +NT Q A
Sbjct: 389 IDGIFRNTQSTIQAYA 404
>Z83120-1|CAB05583.1| 837|Caenorhabditis elegans Hypothetical
protein R06A4.2 protein.
Length = 837
Score = 27.1 bits (57), Expect = 7.3
Identities = 15/71 (21%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 126 DAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGS--DSMVQQVSELSNS 299
+AP D+E +D +TI + + + +N ++ + KE D + ++++ N+
Sbjct: 526 EAPEHEAMDVEDDDEDLDETIPLESDEQMMDENLDTSVASKKEAMDVDELSNKMTDAVNN 585
Query: 300 LQGALTDANGK 332
LQ ++T++ +
Sbjct: 586 LQKSITESTNE 596
>Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical
protein C49C3.4 protein.
Length = 1566
Score = 27.1 bits (57), Expect = 7.3
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +1
Query: 283 PSYPTVYRVR*PTQTVKLRKCSNKLARTWSAQSRISARRTPTSRNKPPHYTRSCKPSSRT 462
P YP ++ PT + L S R+W+ Q + +R+P + P T C S++T
Sbjct: 405 PFYPALHVESNPTAQITLNSISASFDRSWNPQLQ---KRSPAAFEWIPSTTIKC-DSTKT 460
Query: 463 H 465
+
Sbjct: 461 Y 461
>Z81083-3|CAB03104.1| 559|Caenorhabditis elegans Hypothetical
protein F44F1.4 protein.
Length = 559
Score = 27.1 bits (57), Expect = 7.3
Identities = 23/106 (21%), Positives = 51/106 (48%)
Frame = +3
Query: 168 QDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVL 347
Q+ +K EQ + + E + K L+E + ++ V + ++ + K E +
Sbjct: 398 QELEKQKDEQI--MKSMLELEDMKKLLEEKDEKILMHVGK-QRVMKFDMDILKNKLDESI 454
Query: 348 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQTVIQNTLKESQNL 485
+ ++ + +E L KA + +A+ +K +++NTLKE ++L
Sbjct: 455 MKIKEANDHNLE-LEKAKL-IAFEASREEKKQYDILKNTLKEKEDL 498
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 27.1 bits (57), Expect = 7.3
Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 7/121 (5%)
Frame = +3
Query: 144 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDA 323
LQ L K + E+ A NS+ +++ E + + E A +A
Sbjct: 1117 LQRLIKELTARNAELEEELEAERNSRQKSDRSRSEAERELEELTERLEQQGGATAAQLEA 1176
Query: 324 NGKAKEVLQQARQ-------NLERTVEDLRKAHPDVEKQATALHEKLQTVIQNTLKESQN 482
N K + + + R+ N E + LRK H D + T E LQ + + E
Sbjct: 1177 NKKREAEIAKLRREKEEDSLNHETAISSLRKRHGDSVAELTEQLETLQKLKAKSEAEKSK 1236
Query: 483 L 485
L
Sbjct: 1237 L 1237
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 27.1 bits (57), Expect = 7.3
Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 7/121 (5%)
Frame = +3
Query: 144 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDA 323
LQ L K + E+ A NS+ +++ E + + E A +A
Sbjct: 1117 LQRLIKELTARNAELEEELEAERNSRQKSDRSRSEAERELEELTERLEQQGGATAAQLEA 1176
Query: 324 NGKAKEVLQQARQ-------NLERTVEDLRKAHPDVEKQATALHEKLQTVIQNTLKESQN 482
N K + + + R+ N E + LRK H D + T E LQ + + E
Sbjct: 1177 NKKREAEIAKLRREKEEDSLNHETAISSLRKRHGDSVAELTEQLETLQKLKAKSEAEKSK 1236
Query: 483 L 485
L
Sbjct: 1237 L 1237
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
T10G3.5b protein.
Length = 1203
Score = 26.6 bits (56), Expect = 9.7
Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Frame = +3
Query: 219 KNTESLNKALKEGSDSMVQQVSEL---SNSLQGALTDANGKAKEVLQQAR-------QNL 368
+ T+ + K LK + Q+ EL S SL+ + N K + + + R +NL
Sbjct: 801 EKTQEIEK-LKSAVTATTQERDELTATSESLRTECENLNSKIQSIEESRRHAEEKGSENL 859
Query: 369 ERTVEDLRKAHPDVEKQATALHEKLQTVIQNTLKESQNL 485
ER + + + D+E++ + + + +Q ++ E ++L
Sbjct: 860 ERMITEKSRLEKDIEERESTI-QSIQEALETKDNEIESL 897
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
T10G3.5a protein.
Length = 1205
Score = 26.6 bits (56), Expect = 9.7
Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Frame = +3
Query: 219 KNTESLNKALKEGSDSMVQQVSEL---SNSLQGALTDANGKAKEVLQQAR-------QNL 368
+ T+ + K LK + Q+ EL S SL+ + N K + + + R +NL
Sbjct: 803 EKTQEIEK-LKSAVTATTQERDELTATSESLRTECENLNSKIQSIEESRRHAEEKGSENL 861
Query: 369 ERTVEDLRKAHPDVEKQATALHEKLQTVIQNTLKESQNL 485
ER + + + D+E++ + + + +Q ++ E ++L
Sbjct: 862 ERMITEKSRLEKDIEERESTI-QSIQEALETKDNEIESL 899
>Z81036-3|CAB02741.1| 357|Caenorhabditis elegans Hypothetical
protein C16C2.4 protein.
Length = 357
Score = 26.6 bits (56), Expect = 9.7
Identities = 27/112 (24%), Positives = 46/112 (41%)
Frame = +3
Query: 153 LEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGK 332
L ++A+D K + E NA++ + LNK D +Q+ E + L+ G
Sbjct: 93 LFEYAKDAGKKLGEVKNAVIENTMLGDLNKE----QDEFEKQLQEERDKLRNIDLPWQGL 148
Query: 333 AKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTVIQNTLKESQNLA 488
E L A++ + + R D + +E+ Q + LK NLA
Sbjct: 149 PDEEL--AKKQMMSLSTNTRNFLRDSAANSEYTYEQQQAMATLLLKHDPNLA 198
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical
protein T28C6.9 protein.
Length = 1861
Score = 26.6 bits (56), Expect = 9.7
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +3
Query: 135 NTILQDLEKHAQDFQKTISEQFNAI--VNSKNTESLNKALK-EGSDSMVQQVSELSNSLQ 305
N +D+E + Q I E + + K E L++ + ++ +Q E +
Sbjct: 95 NRFQRDVEMSRMEAQNKIEEMSVEVDAAHKKVNEVLSEVEQLRATNFDLQMHIETAKRTM 154
Query: 306 GALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVE---KQATALHEKLQTVIQNTLKES 476
L D N + ++ + + + E EDL+++ DVE +Q AL +L V Q E+
Sbjct: 155 EELADCNEELEKRVDEYEEAAEEKDEDLKQSTWDVETLTRQNEALRVELDGVRQG-FHET 213
Query: 477 QNLA 488
+ LA
Sbjct: 214 RELA 217
>U50309-6|AAG24134.1| 247|Caenorhabditis elegans Hypothetical
protein F58G4.3 protein.
Length = 247
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/65 (24%), Positives = 33/65 (50%)
Frame = +3
Query: 276 QVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTVI 455
++ EL + L + K +L++ + + +++L K + K+ A+ EKL +I
Sbjct: 129 EIDELISKLNELVPQV--KIGNLLKKLISEVSKLIKNLLKKVGKIIKKVGAVFEKLTKII 186
Query: 456 QNTLK 470
+NT K
Sbjct: 187 KNTTK 191
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 26.6 bits (56), Expect = 9.7
Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Frame = +3
Query: 219 KNTESLNKALKEGSDSMVQQVSEL---SNSLQGALTDANGKAKEVLQQAR-------QNL 368
+ T+ + K LK + Q+ EL S SL+ + N K + + + R +NL
Sbjct: 803 EKTQEIEK-LKSAVTATTQERDELTATSESLRTECENLNSKIQSIEESRRHAEEKGSENL 861
Query: 369 ERTVEDLRKAHPDVEKQATALHEKLQTVIQNTLKESQNL 485
ER + + + D+E++ + + + +Q ++ E ++L
Sbjct: 862 ERMITEKSRLEKDIEERESTI-QSIQEALETKDNEIESL 899
>AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical
protein Y55F3AM.14 protein.
Length = 662
Score = 26.6 bits (56), Expect = 9.7
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = +2
Query: 176 PEDDQ*TI*RNRQLKEHGELEQSTEGRLRLHGAAGLRVIQQSTGCVDRRKR*S*GSAP-- 349
PE+++ + L+E E ++ E A+ L G S GS+P
Sbjct: 24 PEEEEFEEYEDELLEEEEEFDEELEELENSDSASSLVSAGSPHGSSSSNG--SHGSSPPL 81
Query: 350 -TSSPELGAHSRGSPQGAPRRR 412
SP G+ S GSP G P +R
Sbjct: 82 QVQSPSQGSGSSGSPTGQPEKR 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,440,784
Number of Sequences: 27780
Number of extensions: 206798
Number of successful extensions: 1055
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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