Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_E05
(408 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 273 4e-74
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 273 4e-74
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 182 1e-46
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 157 3e-39
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 132 1e-31
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 89 2e-18
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 61 4e-10
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 45 3e-05
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 39 0.001
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 39 0.002
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.002
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 36 0.010
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.017
SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055) 34 0.052
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 33 0.090
SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01) 32 0.21
SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3) 31 0.36
SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.63
SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32) 30 0.63
SB_1963| Best HMM Match : rve (HMM E-Value=0.022) 30 0.84
SB_31564| Best HMM Match : ubiquitin (HMM E-Value=0.0026) 29 1.5
SB_34607| Best HMM Match : zf-CXXC (HMM E-Value=7) 29 1.9
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012) 28 2.6
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 28 2.6
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 28 3.4
SB_58000| Best HMM Match : MATH (HMM E-Value=1.1e-19) 28 3.4
SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5) 28 3.4
SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.5
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 27 5.9
SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0) 27 5.9
SB_19779| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_46192| Best HMM Match : ubiquitin (HMM E-Value=0.12) 27 7.8
SB_14676| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 273 bits (669), Expect = 4e-74
Identities = 133/134 (99%), Positives = 134/134 (100%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 86
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 87 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 147 LRLRGGMQIFVKTL 160
Score = 273 bits (669), Expect = 4e-74
Identities = 133/134 (99%), Positives = 134/134 (100%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 162
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 223 LRLRGGMQIFVKTL 236
Score = 273 bits (669), Expect = 4e-74
Identities = 133/134 (99%), Positives = 134/134 (100%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 299 LRLRGGMQIFVKTL 312
Score = 273 bits (669), Expect = 4e-74
Identities = 133/134 (99%), Positives = 134/134 (100%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 375 LRLRGGMQIFVKTL 388
Score = 273 bits (669), Expect = 4e-74
Identities = 133/134 (99%), Positives = 134/134 (100%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 331 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 391 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 451 LRLRGGMQIFVKTL 464
Score = 258 bits (631), Expect = 2e-69
Identities = 125/126 (99%), Positives = 126/126 (100%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 407 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 466
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Query: 365 LRLRGG 382
LRLRGG
Sbjct: 527 LRLRGG 532
Score = 172 bits (419), Expect = 8e-44
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 335 IQKESTLHLVLRLRGGMQIFVKTL 406
IQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTL 84
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 273 bits (669), Expect = 4e-74
Identities = 133/134 (99%), Positives = 134/134 (100%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 86
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 87 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 147 LRLRGGMQIFVKTL 160
Score = 273 bits (669), Expect = 4e-74
Identities = 133/134 (99%), Positives = 134/134 (100%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 162
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 223 LRLRGGMQIFVKTL 236
Score = 273 bits (669), Expect = 4e-74
Identities = 133/134 (99%), Positives = 134/134 (100%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 299 LRLRGGMQIFVKTL 312
Score = 258 bits (631), Expect = 2e-69
Identities = 125/126 (99%), Positives = 126/126 (100%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Query: 365 LRLRGG 382
LRLRGG
Sbjct: 375 LRLRGG 380
Score = 172 bits (419), Expect = 8e-44
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 335 IQKESTLHLVLRLRGGMQIFVKTL 406
IQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTL 84
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 182 bits (443), Expect = 1e-46
Identities = 90/121 (74%), Positives = 104/121 (85%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI VK
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQISVKA-HW 85
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KT TL+VE SDT+E+VK KIQ++EGIPP QRL++ ++L D R+L+DYNI++ S LHL
Sbjct: 86 KTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYNIKQGSILHLF 145
Query: 365 L 367
L
Sbjct: 146 L 146
Score = 165 bits (402), Expect = 9e-42
Identities = 81/82 (98%), Positives = 81/82 (98%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 335 IQKESTLHLVLRLRGGMQIFVK 400
IQKESTLHLVLRLRGGMQI VK
Sbjct: 61 IQKESTLHLVLRLRGGMQISVK 82
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 157 bits (381), Expect = 3e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 335 IQKESTLHLVLRLRGG 382
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 104 bits (250), Expect = 2e-23
Identities = 49/50 (98%), Positives = 50/50 (100%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 132 bits (318), Expect = 1e-31
Identities = 64/67 (95%), Positives = 64/67 (95%)
Frame = +2
Query: 143 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 322
L MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 75 LTSTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 134
Query: 323 SDYNIQK 343
SDYNIQK
Sbjct: 135 SDYNIQK 141
Score = 79.0 bits (186), Expect = 1e-15
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 115
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK
Sbjct: 105 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 141
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 88.6 bits (210), Expect = 2e-18
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +2
Query: 32 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 157
IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 43
Score = 88.6 bits (210), Expect = 2e-18
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +2
Query: 260 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 385
IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 43
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 60.9 bits (141), Expect = 4e-10
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 161 IFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 337
I V TLTG+ I + + P TI VK I+ K G P DQQRL+F G+ L D T I
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGI 132
Query: 338 QKESTLHLVLRLRGG 382
+TLHL++RL GG
Sbjct: 133 FAGATLHLIVRLLGG 147
Score = 47.2 bits (107), Expect = 5e-06
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +2
Query: 14 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
I+ K G P DQQRL+F G+ L D T I +TLHL++RL GG
Sbjct: 101 IEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGIFAGATLHLIVRLLGG 147
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQ---DKEGIPPDQQRLIFAGKQLEDGRTLS 325
M I KTL +T +E+ +T+ +K KI+ K+ P +LI+AGK L D L
Sbjct: 67 MIITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDDNPLK 126
Query: 326 DYNIQKES 349
+YNI ++S
Sbjct: 127 EYNIDEKS 134
Score = 31.9 bits (69), Expect = 0.21
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 23 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 121
K+ P +LI+AGK L D L +YNI ++S
Sbjct: 102 KDAYPHGNIKLIYAGKILNDDNPLKEYNIDEKS 134
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 39.1 bits (87), Expect = 0.001
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 158 QIFVKTLTGKTITLEVEPSDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
Q+F T TL +D + +K++I+ K GIP D QRL F K+L D TL+ N
Sbjct: 7 QVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAKVN 66
Query: 335 IQK 343
+++
Sbjct: 67 LKQ 69
Score = 34.3 bits (75), Expect = 0.039
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 115
+++I+ K GIP D QRL F K+L D TL+ N+++
Sbjct: 33 KSRIELKTGIPGDIQRLHFMNKELYDDATLAKVNLKQ 69
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 331
M++ V G TL+V +EN +A ++ + G+P + L G QL D +TL+ Y
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60
Query: 332 NIQKESTLHLVLR 370
++++ + +V R
Sbjct: 61 SVKENDVILMVRR 73
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 38.3 bits (85), Expect = 0.002
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Frame = +2
Query: 110 QKESTLHLVLRLRGGMQIFVKT--LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 283
QK+ST+ ++ +++ V+ +G L++ + TIE ++ ++ DK G PP QR
Sbjct: 19 QKQSTVEVIKEKTVRLRVVVEDSETSGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRW 78
Query: 284 IFAGKQLEDGRTLSDYNIQKES-TLHLVL 367
I K + +L +++ T +L L
Sbjct: 79 IIGKKMAKPNESLLQCKVRETGFTAYLYL 107
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 256
M ++++TLTG L V P +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 36.3 bits (80), Expect = 0.010
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQ+ VKTL +T T V +EGIP ++QRLIF GK L+D + L +++
Sbjct: 1 MQVTVKTLDSETRTFTVS--------------EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
Score = 35.5 bits (78), Expect = 0.017
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +2
Query: 23 KEGIPPDQQRLIFAGKQLEDGRTLSDYN 106
+EGIP ++QRLIF GK L+D + L +++
Sbjct: 19 EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 35.5 bits (78), Expect = 0.017
Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 5/108 (4%)
Frame = +2
Query: 53 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD----T 220
L +AG LED +D I TL L + V I EP T
Sbjct: 27 LNYAGGVLEDDWIFADIGIPPGVTLRCELIQNTKSYLNVHCAYSGEIVKFTEPMSLFDTT 86
Query: 221 IENVKAKIQDKEGIPPDQQRLIFA-GKQLEDGRTLSDYNIQKESTLHL 361
+ ++K + +K G+ RL+ GK++ D L DYNI T+ L
Sbjct: 87 VGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIRL 134
Score = 28.7 bits (61), Expect = 1.9
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = -2
Query: 404 GSSRIFAFHL*DGAPSEE*IPS----ECCNQKEYGHLQVAFQQKSVSAGQEGCLLCLGSW 237
G S++ A L GA S+E + E CN++ HL ++ A Q+G LLCL +
Sbjct: 184 GYSQLAALLLKQGARSDEAVGEHPVREWCNKQV--HLD-HYKTPIHEAAQQGQLLCLRQF 240
Query: 236 LLHSRWCLM 210
+ H+ C++
Sbjct: 241 IHHNYTCIL 249
Score = 27.1 bits (57), Expect = 5.9
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 14 IQDKEGIPPDQQRLIFA-GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 190
+ +K G+ RL+ GK++ D L DYNI T+ L G F+K T
Sbjct: 94 VTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIR--LETWNGWADFLKAATKGQ 151
Query: 191 IT 196
+T
Sbjct: 152 LT 153
>SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055)
Length = 411
Score = 33.9 bits (74), Expect = 0.052
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +2
Query: 164 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 343
FV G+ ITL P + ++ + G P + ++ K LED T++D + Q
Sbjct: 169 FVVMPEGQVITLHCNPRQSFSELRNHFSSEFGQPAEAILMLHEDKILEDQGTIADLSHQP 228
Query: 344 ESTLHLVLR 370
+TL + L+
Sbjct: 229 GATLQIELQ 237
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 33.1 bits (72), Expect = 0.090
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 29 GIPPDQQRLIFAGKQLEDGRTLSDYN 106
GIP ++QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
Score = 33.1 bits (72), Expect = 0.090
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 257 GIPPDQQRLIFAGKQLEDGRTLSDYN 334
GIP ++QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01)
Length = 792
Score = 31.9 bits (69), Expect = 0.21
Identities = 16/64 (25%), Positives = 35/64 (54%)
Frame = +2
Query: 161 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 340
+ ++T G T+ +E+ ++E++KA+ + + GIP + RL LED + +
Sbjct: 185 MLLQTRGGSTLEIEITERTSVEDLKAEAELRVGIPVELIRLQVNKVNLEDSEKICERGHL 244
Query: 341 KEST 352
+++T
Sbjct: 245 QKAT 248
>SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3)
Length = 325
Score = 31.1 bits (67), Expect = 0.36
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +1
Query: 127 PLGPSSERWNANICEDPHWQDYHP*GGAIRHHRECKSQDPRQRRHPS*PAE 279
P GP+ E+ + E P Q +P G A + HR + P Q R+P+ PAE
Sbjct: 214 PTGPA-EKPHQYSRETPPVQPRNPTGPAEKPHRSSRETPPVQPRNPTCPAE 263
>SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 30.3 bits (65), Expect = 0.63
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 116 ESTLHLVLRLRGGM 157
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
Score = 30.3 bits (65), Expect = 0.63
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 344 ESTLHLVLRLRGGM 385
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
>SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32)
Length = 78
Score = 30.3 bits (65), Expect = 0.63
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 116 ESTLHLVLRLRGGM 157
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
Score = 30.3 bits (65), Expect = 0.63
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 344 ESTLHLVLRLRGGM 385
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
>SB_1963| Best HMM Match : rve (HMM E-Value=0.022)
Length = 931
Score = 29.9 bits (64), Expect = 0.84
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +2
Query: 167 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 337
+ +L G I P +++A IP DQ L F + LEDGR Y +
Sbjct: 533 LNSLVGVLIRFREHPVAIAADIEAMFMQCRVIPTDQPSLRFLWRDLEDGRRPDVYQM 589
>SB_31564| Best HMM Match : ubiquitin (HMM E-Value=0.0026)
Length = 309
Score = 29.1 bits (62), Expect = 1.5
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +2
Query: 167 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR---TLSDYNI 337
V + G+T + P +I +K KI + +QRL++ +L++ + LS++ +
Sbjct: 60 VAMMGGETTVIPYNPVMSIAELKLKISQNIRVDRLKQRLMYNDTELKENKGSGKLSEFGV 119
Query: 338 QKESTLHLVLRL 373
+T+ L++ L
Sbjct: 120 PPYATISLIVVL 131
>SB_34607| Best HMM Match : zf-CXXC (HMM E-Value=7)
Length = 182
Score = 28.7 bits (61), Expect = 1.9
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = -3
Query: 406 EGLHEYLHSTSETEHQVKSRFLLNVVIRKSTAIFKLLSSKNQSLLVR 266
E + EY H SE+++ K FLL ++ T + +++S ++L R
Sbjct: 121 EQIEEYWHWFSESKYWTKLNFLLGLMQHCDTHLLFIMASNTRTLYER 167
>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
Length = 1148
Score = 28.3 bits (60), Expect = 2.6
Identities = 15/65 (23%), Positives = 36/65 (55%)
Frame = +2
Query: 146 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 325
R +Q ++T GKTI L E + ++ + ++K+G+ + ++L + ++L+ T +
Sbjct: 711 RDDLQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLAAEVKQLQKSSEELQQQLTDT 770
Query: 326 DYNIQ 340
+ +Q
Sbjct: 771 EEKLQ 775
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 28.3 bits (60), Expect = 2.6
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +2
Query: 38 PDQQRLIFAGKQLEDGRTLSDY--NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEP 211
PD ++ I G L+DG+T+ D + ++E L+ ++ G + L + L E
Sbjct: 538 PDSKKNILEGLDLQDGKTVEDLLSDYRRELELYRQIKDENGTVSRIVNLEKQVNDLSGEN 597
Query: 212 SDTIENVKAKIQDKEG 259
S +++ ++DK G
Sbjct: 598 S-SLKTTMGDVKDKVG 612
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 27.9 bits (59), Expect = 3.4
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +2
Query: 98 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE--PSDTIENVKAK 241
DY + KES L + RGG+ F T+ + L + P D N++ +
Sbjct: 108 DYKLDKESQHSLTITSRGGVSRFFPTIYKSSCALNIRHFPFDDQINIRRR 157
>SB_58000| Best HMM Match : MATH (HMM E-Value=1.1e-19)
Length = 1451
Score = 27.9 bits (59), Expect = 3.4
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -3
Query: 406 EGLHEYLHSTSETEHQ-VKSRFLLNVVIRKSTAIFKLLSSKNQSLLVRRD 260
+ H+Y + +E Q +K + +V + ++ I+ + SSK+Q+ VR+D
Sbjct: 162 QSAHDYCRTYEASETQKIKFSLPIGIVEQSASNIYDIKSSKSQNNKVRQD 211
>SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5)
Length = 106
Score = 27.9 bits (59), Expect = 3.4
Identities = 15/65 (23%), Positives = 35/65 (53%)
Frame = +2
Query: 146 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 325
R +Q ++T GKTI L E + ++ + ++K+G+ + + L + ++L+ T +
Sbjct: 7 RDDLQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLVAEVEHLQKSSEELQQQLTDT 66
Query: 326 DYNIQ 340
+ +Q
Sbjct: 67 EEKLQ 71
>SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 27.5 bits (58), Expect = 4.5
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 182 GKTITLEVEPS-DTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 310
G T E+E + +++E + I GIP D+Q L+ G + D
Sbjct: 10 GAMYTFEMEMAMESVETLMGSIASSTGIPVDKQVLLICGGEALD 53
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 176 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 307
L G +IT+ +E D +EN++ +K+ +PP ++L+F + L+
Sbjct: 102 LGGNSITV-IEGLDKLENLRELHMEKQHLPPG-EKLLFDPRTLQ 143
>SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 1250
Score = 27.1 bits (57), Expect = 5.9
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -1
Query: 327 SERVRPSSSCFPAKISLCWSGGMPSLSWILAFTFSMVSDGSTSRVIV 187
SER + S+ P IS+ G P+L+ + V D S+S ++V
Sbjct: 465 SERAKSDSTTSPGVISVIKGKGNPALACLFLTQIGKVLDTSSSLLLV 511
>SB_19779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 12 RSKTKKASLLTSRD*FLLESNLKMAGLFLIITFRKNLPSTWSF 140
R + ++ L T D F+L L L ++IT P+TW+F
Sbjct: 301 RERDQQTQLKTQIDTFILILQLDDQILVVVITVNLGEPTTWTF 343
>SB_46192| Best HMM Match : ubiquitin (HMM E-Value=0.12)
Length = 533
Score = 26.6 bits (56), Expect = 7.8
Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 2/112 (1%)
Frame = +2
Query: 29 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV-LRLRGGMQIFVKTLTGKTIT-LE 202
G+P + Q + D L D+ K++ H L+L F L I LE
Sbjct: 39 GVPVELQAIYLVDN---DDVELQDWACLKDAATHTFKLQLMESAAKFEVLLPNDDIECLE 95
Query: 203 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 358
+ T+ N+K ++ G+P + Q + D L D+ K++ H
Sbjct: 96 IASDKTVYNLKLICEEHFGVPVELQAIYLVD---NDDVELQDWACLKDAATH 144
>SB_14676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 905
Score = 26.6 bits (56), Expect = 7.8
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = -3
Query: 406 EGLHEYLHSTSETEHQVKSRFLL--NVVIRKSTAIFKLLSSKNQSLLVRRD 260
+ H+Y + +E Q K +F L +V + ++ I+ + SSK+Q+ VR+D
Sbjct: 162 QSAHDYCRTYEASETQ-KMKFSLPTGIVEQSASNIYDIKSSKSQNNKVRQD 211
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,106,159
Number of Sequences: 59808
Number of extensions: 297802
Number of successful extensions: 748
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 740151420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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