Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_E05
         (408 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.    273   2e-75
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          26   0.61 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   0.80 
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    23   4.3  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   4.3  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score =  273 bits (669), Expect = 2e-75
 Identities = 133/134 (99%), Positives = 134/134 (100%)
 Frame = +2

Query: 5   EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
           +AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 27  KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 86

Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
           KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 87  KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146

Query: 365 LRLRGGMQIFVKTL 406
           LRLRGGMQIFVKTL
Sbjct: 147 LRLRGGMQIFVKTL 160



 Score =  258 bits (631), Expect = 7e-71
 Identities = 125/126 (99%), Positives = 126/126 (100%)
 Frame = +2

Query: 5   EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
           +AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 162

Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
           KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222

Query: 365 LRLRGG 382
           LRLRGG
Sbjct: 223 LRLRGG 228



 Score =  172 bits (419), Expect = 4e-45
 Identities = 84/84 (100%), Positives = 84/84 (100%)
 Frame = +2

Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
           MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 335 IQKESTLHLVLRLRGGMQIFVKTL 406
           IQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTL 84


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 25.8 bits (54), Expect = 0.61
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -2

Query: 155  FHLSDEGPSGG*ILSECYNQKESGHLQVAFQQ 60
            + + D+ P GG ++S+  N   SG  +  +QQ
Sbjct: 912  YTIGDQSPGGGMMVSDTINNNSSGDGRWTYQQ 943


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.4 bits (53), Expect = 0.80
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = -2

Query: 161  FAFHLSDEGPSGG*ILSECYNQKESGHLQVAFQQKSVSAGQEGCL 27
            F  H+ D+  SG   L + YN K  G   +   Q S SAG +G L
Sbjct: 1773 FFMHVKDK--SG---LDDVYNFKTFGQSMILLFQMSTSAGWDGVL 1812


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 111 RKNLPSTWSFV*EVECKY 164
           RKNLP +W F+ + + K+
Sbjct: 142 RKNLPRSWMFMQDNDSKH 159


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = +2

Query: 23  KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 145
           K   P  Q R IF G+ +++   +    +Q++   HL++ L
Sbjct: 588 KREFPDLQNRTIFTGRFVKELYDVRSGCVQEQDGTHLLMNL 628



 Score = 23.0 bits (47), Expect = 4.3
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = +2

Query: 251 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 373
           K   P  Q R IF G+ +++   +    +Q++   HL++ L
Sbjct: 588 KREFPDLQNRTIFTGRFVKELYDVRSGCVQEQDGTHLLMNL 628


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 467,649
Number of Sequences: 2352
Number of extensions: 9773
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32922351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)