Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_E05
(408 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 266 4e-72
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 266 4e-72
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 266 4e-72
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 266 4e-72
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 266 4e-72
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 266 4e-72
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 266 4e-72
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 266 4e-72
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 266 4e-72
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 266 4e-72
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 266 4e-72
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 266 4e-72
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 259 6e-70
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 254 2e-68
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 251 2e-67
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 240 3e-64
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 203 3e-53
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 201 2e-52
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 152 1e-37
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 152 1e-37
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 151 1e-37
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 151 1e-37
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 151 1e-37
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 116 8e-27
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 95 2e-20
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 90 6e-19
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 76 8e-15
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 76 8e-15
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 67 5e-12
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 65 2e-11
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 64 3e-11
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 64 5e-11
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 56 7e-09
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 54 4e-08
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 51 3e-07
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 50 5e-07
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 50 5e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 50 5e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 50 6e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 50 6e-07
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 50 8e-07
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 49 1e-06
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 49 1e-06
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 49 1e-06
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 49 1e-06
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 49 1e-06
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 49 1e-06
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 49 1e-06
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 48 2e-06
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 47 4e-06
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 46 7e-06
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 44 3e-05
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 43 7e-05
At5g16090.1 68418.m01880 ubiquitin family protein contains INTER... 42 2e-04
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 42 2e-04
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 40 8e-04
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 39 0.001
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 38 0.002
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 37 0.006
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 37 0.006
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 36 0.008
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 36 0.010
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 34 0.032
At1g11970.1 68414.m01383 hypothetical protein 34 0.032
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 32 0.13
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 32 0.13
At4g03430.1 68417.m00470 pre-mRNA splicing factor-related simila... 31 0.22
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 31 0.39
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 0.52
At5g56900.2 68418.m07101 CwfJ-like family protein / zinc finger ... 29 1.2
At5g56900.1 68418.m07100 CwfJ-like family protein / zinc finger ... 29 1.2
At4g31210.1 68417.m04432 DNA topoisomerase family protein simila... 29 1.2
At1g47680.1 68414.m05297 hypothetical protein 29 1.6
At1g03970.1 68414.m00383 G-box binding factor 4 (GBF4) identical... 29 1.6
At5g47250.1 68418.m05826 disease resistance protein (CC-NBS-LRR ... 28 2.8
At4g10070.1 68417.m01647 KH domain-containing protein DNA-direct... 28 2.8
At2g01820.1 68415.m00113 leucine-rich repeat protein kinase, put... 27 6.4
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 26 8.5
At3g32270.1 68416.m04114 hypothetical protein similar to putativ... 26 8.5
At2g32410.1 68415.m03960 auxin-resistance protein, putative stro... 26 8.5
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 86
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 147 LRLRGGMQIFVKTL 160
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 162
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 223 LRLRGGMQIFVKTL 236
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 299 LRLRGGMQIFVKTL 312
Score = 251 bits (614), Expect = 2e-67
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 374
Query: 365 LRLRGG 382
LRLRGG
Sbjct: 375 LRLRGG 380
Score = 167 bits (405), Expect = 3e-42
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 335 IQKESTLHLVLRLRGGMQIFVKTL 406
IQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTL 84
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 86
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 147 LRLRGGMQIFVKTL 160
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 162
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 223 LRLRGGMQIFVKTL 236
Score = 251 bits (614), Expect = 2e-67
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Query: 365 LRLRGG 382
LRLRGG
Sbjct: 299 LRLRGG 304
Score = 167 bits (405), Expect = 3e-42
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 335 IQKESTLHLVLRLRGGMQIFVKTL 406
IQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTL 84
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 86
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 147 LRLRGGMQIFVKTL 160
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 162
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 223 LRLRGGMQIFVKTL 236
Score = 251 bits (614), Expect = 2e-67
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Query: 365 LRLRGG 382
LRLRGG
Sbjct: 299 LRLRGG 304
Score = 167 bits (405), Expect = 3e-42
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 335 IQKESTLHLVLRLRGGMQIFVKTL 406
IQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTL 84
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 86
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 147 LRLRGGMQIFVKTL 160
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 162
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 223 LRLRGGMQIFVKTL 236
Score = 167 bits (405), Expect = 3e-42
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 335 IQKESTLHLVLRLRGGMQIFVKTL 406
IQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTL 84
Score = 165 bits (402), Expect = 8e-42
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Query: 185 KTITLEVEPSDTIENVKAKIQDKE 256
KTITLEVE SDTI+NVKAKIQDKE
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKE 262
Score = 39.5 bits (88), Expect = 8e-04
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +3
Query: 234 KPRSKTKKASLLTSRD*FLLESNLKMAVLFLITTFRRNLLFTWCSVSEVECK 389
K + + K+ L TS LES+L+M VL+ TT RR+LLFTW V V K
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSK 306
Score = 26.6 bits (56), Expect = 6.4
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 6 RPRSKTKKASLLTSRD*FLLESNLKMAGLFLIITFRKNLPSTWSFV 143
+ + + K+ L TS LES+L+M L+ T R++L TWS V
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCV 300
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 86
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 147 LRLRGGMQIFVKTL 160
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 162
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 223 LRLRGGMQIFVKTL 236
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 299 LRLRGGMQIFVKTL 312
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 374
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 375 LRLRGGMQIFVKTL 388
Score = 167 bits (405), Expect = 3e-42
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 335 IQKESTLHLVLRLRGGMQIFVKTL 406
IQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTL 84
Score = 165 bits (402), Expect = 8e-42
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 331 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Query: 185 KTITLEVEPSDTIENVKAKIQDKE 256
KTITLEVE SDTI+NVKAKIQDKE
Sbjct: 391 KTITLEVESSDTIDNVKAKIQDKE 414
Score = 39.5 bits (88), Expect = 8e-04
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +3
Query: 234 KPRSKTKKASLLTSRD*FLLESNLKMAVLFLITTFRRNLLFTWCSVSEVECK 389
K + + K+ L TS LES+L+M VL+ TT RR+LLFTW V V K
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSK 458
Score = 26.6 bits (56), Expect = 6.4
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 6 RPRSKTKKASLLTSRD*FLLESNLKMAGLFLIITFRKNLPSTWSFV 143
+ + + K+ L TS LES+L+M L+ T R++L TWS V
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCV 452
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 86
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 147 LRLRGGMQIFVKTL 160
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 162
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 223 LRLRGGMQIFVKTL 236
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 299 LRLRGGMQIFVKTL 312
Score = 167 bits (405), Expect = 3e-42
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 335 IQKESTLHLVLRLRGGMQIFVKTL 406
IQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTL 84
Score = 165 bits (402), Expect = 8e-42
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Query: 185 KTITLEVEPSDTIENVKAKIQDKE 256
KTITLEVE SDTI+NVKAKIQDKE
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKE 338
Score = 39.5 bits (88), Expect = 8e-04
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +3
Query: 234 KPRSKTKKASLLTSRD*FLLESNLKMAVLFLITTFRRNLLFTWCSVSEVECK 389
K + + K+ L TS LES+L+M VL+ TT RR+LLFTW V V K
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSK 382
Score = 26.6 bits (56), Expect = 6.4
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 6 RPRSKTKKASLLTSRD*FLLESNLKMAGLFLIITFRKNLPSTWSFV 143
+ + + K+ L TS LES+L+M L+ T R++L TWS V
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCV 376
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 86
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 147 LRLRGGMQIFVKTL 160
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 162
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 223 LRLRGGMQIFVKTL 236
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 299 LRLRGGMQIFVKTL 312
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 374
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 375 LRLRGGMQIFVKTL 388
Score = 167 bits (405), Expect = 3e-42
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 335 IQKESTLHLVLRLRGGMQIFVKTL 406
IQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTL 84
Score = 165 bits (402), Expect = 8e-42
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 331 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 390
Query: 185 KTITLEVEPSDTIENVKAKIQDKE 256
KTITLEVE SDTI+NVKAKIQDKE
Sbjct: 391 KTITLEVESSDTIDNVKAKIQDKE 414
Score = 39.5 bits (88), Expect = 8e-04
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +3
Query: 234 KPRSKTKKASLLTSRD*FLLESNLKMAVLFLITTFRRNLLFTWCSVSEVECK 389
K + + K+ L TS LES+L+M VL+ TT RR+LLFTW V V K
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSK 458
Score = 26.6 bits (56), Expect = 6.4
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 6 RPRSKTKKASLLTSRD*FLLESNLKMAGLFLIITFRKNLPSTWSFV 143
+ + + K+ L TS LES+L+M L+ T R++L TWS V
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCV 452
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 86
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 147 LRLRGGMQIFVKTL 160
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 162
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 223 LRLRGGMQIFVKTL 236
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 299 LRLRGGMQIFVKTL 312
Score = 167 bits (405), Expect = 3e-42
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 335 IQKESTLHLVLRLRGGMQIFVKTL 406
IQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTL 84
Score = 165 bits (402), Expect = 8e-42
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 314
Query: 185 KTITLEVEPSDTIENVKAKIQDKE 256
KTITLEVE SDTI+NVKAKIQDKE
Sbjct: 315 KTITLEVESSDTIDNVKAKIQDKE 338
Score = 39.5 bits (88), Expect = 8e-04
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +3
Query: 234 KPRSKTKKASLLTSRD*FLLESNLKMAVLFLITTFRRNLLFTWCSVSEVECK 389
K + + K+ L TS LES+L+M VL+ TT RR+LLFTW V V K
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSK 382
Score = 26.6 bits (56), Expect = 6.4
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 6 RPRSKTKKASLLTSRD*FLLESNLKMAGLFLIITFRKNLPSTWSFV 143
+ + + K+ L TS LES+L+M L+ T R++L TWS V
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCV 376
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 86
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 147 LRLRGGMQIFVKTL 160
Score = 251 bits (614), Expect = 2e-67
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 162
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 365 LRLRGG 382
LRLRGG
Sbjct: 223 LRLRGG 228
Score = 167 bits (405), Expect = 3e-42
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 335 IQKESTLHLVLRLRGGMQIFVKTL 406
IQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTL 84
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 86
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 147 LRLRGGMQIFVKTL 160
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 162
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 223 LRLRGGMQIFVKTL 236
Score = 251 bits (614), Expect = 2e-67
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Query: 365 LRLRGG 382
LRLRGG
Sbjct: 299 LRLRGG 304
Score = 167 bits (405), Expect = 3e-42
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 335 IQKESTLHLVLRLRGGMQIFVKTL 406
IQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTL 84
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 86
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 147 LRLRGGMQIFVKTL 160
Score = 251 bits (614), Expect = 2e-67
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 162
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 365 LRLRGG 382
LRLRGG
Sbjct: 223 LRLRGG 228
Score = 167 bits (405), Expect = 3e-42
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 335 IQKESTLHLVLRLRGGMQIFVKTL 406
IQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTL 84
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 86
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 147 LRLRGGMQIFVKTL 160
Score = 266 bits (652), Expect = 4e-72
Identities = 129/134 (96%), Positives = 133/134 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 162
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 223 LRLRGGMQIFVKTL 236
Score = 251 bits (614), Expect = 2e-67
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 238
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 239 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Query: 365 LRLRGG 382
LRLRGG
Sbjct: 299 LRLRGG 304
Score = 167 bits (405), Expect = 3e-42
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 335 IQKESTLHLVLRLRGGMQIFVKTL 406
IQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTL 84
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 259 bits (634), Expect = 6e-70
Identities = 128/134 (95%), Positives = 132/134 (98%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 86
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D NIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLV 145
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 146 LRLRGGMQIFVKTL 159
Score = 256 bits (626), Expect = 5e-69
Identities = 127/134 (94%), Positives = 131/134 (97%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D NIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVLRLRGGMQIFVKTLTG 161
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKE IPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 162 KTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 221
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 222 LRLRGGMQIFVKTL 235
Score = 197 bits (480), Expect = 3e-51
Identities = 96/103 (93%), Positives = 99/103 (96%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKE IPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 178 KAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 237
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 313
KTITLEVE S TI+NVKAKIQDKEGIPPDQQRLIFAGKQLE G
Sbjct: 238 KTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
Score = 167 bits (405), Expect = 3e-42
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 335 IQKESTLHLVLRLRGGMQIFVKTL 406
IQKESTLHLVLRLRGGMQIFVKTL
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTL 84
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 254 bits (621), Expect = 2e-68
Identities = 121/134 (90%), Positives = 130/134 (97%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN+Q++STLHL+LR RGGMQIFVKTLTG
Sbjct: 27 KAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNVQEDSTLHLLLRFRGGMQIFVKTLTG 86
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+N+KAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 KTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFVKTL
Sbjct: 147 LRLRGGMQIFVKTL 160
Score = 245 bits (599), Expect = 1e-65
Identities = 119/126 (94%), Positives = 123/126 (97%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTG 162
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEGI PDQQRLIFAGKQ EDGRTL+DYNIQKESTLHLV
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYNIQKESTLHLV 222
Query: 365 LRLRGG 382
LRLRGG
Sbjct: 223 LRLRGG 228
Score = 149 bits (362), Expect = 5e-37
Identities = 71/84 (84%), Positives = 78/84 (92%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIF+KTLTGKT LEVE SDTI+NVKAKIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 335 IQKESTLHLVLRLRGGMQIFVKTL 406
+Q++STLHL+LR RGGMQIFVKTL
Sbjct: 61 VQEDSTLHLLLRFRGGMQIFVKTL 84
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 251 bits (614), Expect = 2e-67
Identities = 121/134 (90%), Positives = 128/134 (95%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEG+PPDQQRLIFAGKQL+DGRTL+DYNIQKESTLHLVLRLRGGMQIFV+TLT
Sbjct: 105 KAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGMQIFVRTLTR 164
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTI LEVE SDT +NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 165 KTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 224
Query: 365 LRLRGGMQIFVKTL 406
LRL GGMQIFV TL
Sbjct: 225 LRLCGGMQIFVNTL 238
Score = 244 bits (596), Expect = 2e-65
Identities = 117/134 (87%), Positives = 128/134 (95%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQD EGIP DQQRLIF+GK L+DGRTL+DY+IQK+S LHL LRLRGGMQIFVKTLTG
Sbjct: 29 KAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKDSILHLALRLRGGMQIFVKTLTG 88
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEVE SDTI+NVKAKIQDKEG+PPDQQRLIFAGKQL+DGRTL+DYNIQKESTLHLV
Sbjct: 89 KTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLV 148
Query: 365 LRLRGGMQIFVKTL 406
LRLRGGMQIFV+TL
Sbjct: 149 LRLRGGMQIFVRTL 162
Score = 230 bits (563), Expect = 2e-61
Identities = 115/127 (90%), Positives = 120/127 (94%), Gaps = 1/127 (0%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRL GGMQIFV TLTG
Sbjct: 181 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVNTLTG 240
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLHL 361
KTITLEVE SDTI+NVKAKIQDKE I PDQQRLIFAG+QLEDG TL+DYNIQKESTLHL
Sbjct: 241 KTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADYNIQKESTLHL 300
Query: 362 VLRLRGG 382
VLRLRGG
Sbjct: 301 VLRLRGG 307
Score = 134 bits (323), Expect = 3e-32
Identities = 66/84 (78%), Positives = 73/84 (86%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQI KTLT KTIT++V SDTI NVKAKIQD EGIP DQQRLIF+GK L+DGRTL+DY+
Sbjct: 3 MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYS 62
Query: 335 IQKESTLHLVLRLRGGMQIFVKTL 406
IQK+S LHL LRLRGGMQIFVKTL
Sbjct: 63 IQKDSILHLALRLRGGMQIFVKTL 86
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 240 bits (587), Expect = 3e-64
Identities = 119/133 (89%), Positives = 126/133 (94%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQ+KEGIP DQQRLIFAGKQLEDG TL+DYNIQKESTLHLVLRLRGGMQIFV+TLTG
Sbjct: 29 KAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNIQKESTLHLVLRLRGGMQIFVQTLTG 88
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTITLEV+ SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 89 KTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 148
Query: 365 LRLRGGMQIFVKT 403
LRL GGMQIFV T
Sbjct: 149 LRLCGGMQIFVST 161
Score = 200 bits (487), Expect = 4e-52
Identities = 105/141 (74%), Positives = 116/141 (82%), Gaps = 7/141 (4%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGI P QQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRL GGMQIFV T +G
Sbjct: 105 KAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVSTFSG 164
Query: 185 K-----TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL--EDGRTLSDYNIQK 343
K T+TL+VE SDTIENVKAKIQD+EG+ PD QRLIF G++L ED RTL+DY I+
Sbjct: 165 KNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDNRTLADYGIRN 224
Query: 344 ESTLHLVLRLRGGMQIFVKTL 406
STL L LRLRG M IFVK L
Sbjct: 225 RSTLCLALRLRGDMYIFVKNL 245
Score = 180 bits (439), Expect = 3e-46
Identities = 94/141 (66%), Positives = 105/141 (74%), Gaps = 7/141 (4%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL-- 178
+AKIQDK G PPDQQ L+F G QL+DGRTL DYNI+ ESTLHL +R GMQIFVKT
Sbjct: 419 KAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNIRNESTLHLFFHIRHGMQIFVKTFSF 478
Query: 179 -----TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 343
T KTITLEVE SDTI+NVK KIQ K GIP D+QRLIF G+ L RTL DYNIQK
Sbjct: 479 SGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQK 538
Query: 344 ESTLHLVLRLRGGMQIFVKTL 406
ST+H + RGGMQIF+KTL
Sbjct: 539 GSTIHQLFLQRGGMQIFIKTL 559
Score = 180 bits (437), Expect = 4e-46
Identities = 94/135 (69%), Positives = 106/135 (78%), Gaps = 2/135 (1%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQ--QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 178
+A +QDKEGI P QRLIF GK+L+DG TL+DY+IQKESTLHLVL GMQIFVK
Sbjct: 345 KAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLADYSIQKESTLHLVL----GMQIFVKLF 400
Query: 179 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 358
GK ITLEV SDTI++VKAKIQDK G PPDQQ L+F G QL+DGRTL DYNI+ ESTLH
Sbjct: 401 GGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNIRNESTLH 460
Query: 359 LVLRLRGGMQIFVKT 403
L +R GMQIFVKT
Sbjct: 461 LFFHIRHGMQIFVKT 475
Score = 179 bits (436), Expect = 6e-46
Identities = 97/134 (72%), Positives = 107/134 (79%), Gaps = 2/134 (1%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AK+QDKE IP D RLIFAGK LE GRTL+ YNIQK STL+LV R R GMQIFVKTLT
Sbjct: 269 KAKLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTRFRCGMQIFVKTLTR 328
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGI--PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 358
K I LEVE DTIENVKA +QDKEGI P+ QRLIF GK+L+DG TL+DY+IQKESTLH
Sbjct: 329 KRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLADYSIQKESTLH 388
Query: 359 LVLRLRGGMQIFVK 400
LVL GMQIFVK
Sbjct: 389 LVL----GMQIFVK 398
Score = 176 bits (428), Expect = 5e-45
Identities = 95/141 (67%), Positives = 107/141 (75%), Gaps = 7/141 (4%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQL--EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 178
+AKIQD+EG+ PD QRLIF G++L ED RTL+DY I+ STL L LRLRG M IFVK L
Sbjct: 186 KAKIQDREGLRPDHQRLIFHGEELFTEDNRTLADYGIRNRSTLCLALRLRGDMYIFVKNL 245
Query: 179 -----TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 343
TG+ LEVE SDTI+NVKAK+QDKE IP D RLIFAGK LE GRTL+ YNIQK
Sbjct: 246 PYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQK 305
Query: 344 ESTLHLVLRLRGGMQIFVKTL 406
STL+LV R R GMQIFVKTL
Sbjct: 306 GSTLYLVTRFRCGMQIFVKTL 326
Score = 173 bits (421), Expect = 4e-44
Identities = 88/124 (70%), Positives = 98/124 (79%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+ KIQ K GIP D+QRLIF G+ L RTL DYNIQK ST+H + RGGMQIF+KTLTG
Sbjct: 502 KVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGSTIHQLFLQRGGMQIFIKTLTG 561
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
KTI LEVE SDTI NVK KIQ KEGI PDQQ LIF G+QLEDG TL DY+I K+STL+LV
Sbjct: 562 KTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYDIHKKSTLYLV 621
Query: 365 LRLR 376
LRLR
Sbjct: 622 LRLR 625
Score = 145 bits (351), Expect = 1e-35
Identities = 71/84 (84%), Positives = 78/84 (92%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
+QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TL+DYN
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62
Query: 335 IQKESTLHLVLRLRGGMQIFVKTL 406
IQKESTLHLVLRLRGGMQIFV+TL
Sbjct: 63 IQKESTLHLVLRLRGGMQIFVQTL 86
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 203 bits (496), Expect = 3e-53
Identities = 95/126 (75%), Positives = 110/126 (87%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG I VKTLTG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTG 86
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
K I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLV
Sbjct: 87 KEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLV 146
Query: 365 LRLRGG 382
L LRGG
Sbjct: 147 LALRGG 152
Score = 159 bits (385), Expect = 9e-40
Identities = 78/84 (92%), Positives = 80/84 (95%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 335 IQKESTLHLVLRLRGGMQIFVKTL 406
IQKESTLHLVLRLRGG I VKTL
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTL 84
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 201 bits (490), Expect = 2e-52
Identities = 94/127 (74%), Positives = 110/127 (86%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG I VKTLTG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTG 86
Query: 185 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 364
K I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DY I+ S LHLV
Sbjct: 87 KEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLV 146
Query: 365 LRLRGGM 385
L LRGG+
Sbjct: 147 LALRGGL 153
Score = 159 bits (385), Expect = 9e-40
Identities = 78/84 (92%), Positives = 80/84 (95%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 335 IQKESTLHLVLRLRGGMQIFVKTL 406
IQKESTLHLVLRLRGG I VKTL
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTL 84
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 152 bits (368), Expect = 1e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 335 IQKESTLHLVLRLRGGM 385
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 103 bits (248), Expect = 3e-23
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 157
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI 77
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 152 bits (368), Expect = 1e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 335 IQKESTLHLVLRLRGGM 385
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 103 bits (248), Expect = 3e-23
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 157
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI 77
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 151 bits (367), Expect = 1e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 335 IQKESTLHLVLRLRGG 382
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 103 bits (247), Expect = 5e-23
Identities = 48/50 (96%), Positives = 50/50 (100%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 151 bits (367), Expect = 1e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 335 IQKESTLHLVLRLRGG 382
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 103 bits (247), Expect = 5e-23
Identities = 48/50 (96%), Positives = 50/50 (100%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 151 bits (367), Expect = 1e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 335 IQKESTLHLVLRLRGG 382
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 103 bits (248), Expect = 3e-23
Identities = 55/80 (68%), Positives = 60/80 (75%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG K
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG----AKKRKK 82
Query: 185 KTITLEVEPSDTIENVKAKI 244
KT T + T + VK +
Sbjct: 83 KTYTKPKKIKHTHKKVKLAV 102
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 116 bits (278), Expect = 8e-27
Identities = 55/73 (75%), Positives = 62/73 (84%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP DQQRLIF GKQLEDG TL+DYN
Sbjct: 86 MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYN 145
Query: 335 IQKESTLHLVLRL 373
IQ +S LHL+ RL
Sbjct: 146 IQNDSILHLIKRL 158
Score = 78.6 bits (185), Expect = 1e-15
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 145
+AKIQDK+GIP DQQRLIF GKQLEDG TL+DYNIQ +S LHL+ RL
Sbjct: 112 KAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYNIQNDSILHLIKRL 158
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 94.7 bits (225), Expect = 2e-20
Identities = 43/76 (56%), Positives = 57/76 (75%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 335 IQKESTLHLVLRLRGG 382
+++ S LHLVL LRGG
Sbjct: 61 LERGSVLHLVLALRGG 76
Score = 64.1 bits (149), Expect = 3e-11
Identities = 27/48 (56%), Positives = 36/48 (75%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
+I++KEGIPP QR+++ GKQL D T YN+++ S LHLVL LRGG
Sbjct: 29 RIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 89.8 bits (213), Expect = 6e-19
Identities = 56/132 (42%), Positives = 77/132 (58%), Gaps = 15/132 (11%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGK-------------QLEDGRTLSDYNIQKESTLHLVLRL 145
+AK ++KEGIP +QQRLIF G+ ++ D D I E T LVLRL
Sbjct: 76 KAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSINLEVADSSDTIDLKINGEPTRQLVLRL 135
Query: 146 RGG--MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 319
M+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P DQQ L G +L++ T
Sbjct: 136 GPAVLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNAT 195
Query: 320 LSDYNIQKESTL 355
+SDYNI+ ++ L
Sbjct: 196 ISDYNIKPDANL 207
Score = 76.6 bits (180), Expect = 6e-15
Identities = 56/133 (42%), Positives = 71/133 (53%), Gaps = 21/133 (15%)
Frame = +2
Query: 71 QLEDGRTLSDYNIQKESTLHLVLRLR-----GG-MQIFVKTLTGKTITLEVEPSDTIENV 232
++ED D I E T LV+ L G M IF+KTLTG+T T EV+ SDTI +
Sbjct: 16 EVEDSSNTIDLKIHGEPTRELVVDLSPTPDTGAIMMIFIKTLTGRTNTYEVKGSDTIREL 75
Query: 233 KAKIQDKEGIPPDQQRLIFAGK-------------QLEDGRTLSDYNIQKESTLHLVLRL 373
KAK ++KEGIP +QQRLIF G+ ++ D D I E T LVLRL
Sbjct: 76 KAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSINLEVADSSDTIDLKINGEPTRQLVLRL 135
Query: 374 RGG--MQIFVKTL 406
M+IFV T+
Sbjct: 136 GPAVLMRIFVSTI 148
Score = 28.3 bits (60), Expect = 2.1
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVK 235
M I +KTL GK I LEVE S ++K
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTIDLK 27
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 76.2 bits (179), Expect = 8e-15
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 187
+IQ G Q+L+F G++L + DY + + + LHLVL+L + VKT GK
Sbjct: 62 RIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGNILHLVLKLSDLQVLDVKTTCGK 121
Query: 188 TITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 361
VE I VK +I K G + PD+Q +++ G++LED ++D +S LHL
Sbjct: 122 HCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLHL 181
Query: 362 VLR 370
++R
Sbjct: 182 LVR 184
Score = 56.4 bits (130), Expect = 7e-09
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +2
Query: 173 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 349
TL G I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 350 TLHLVLRLRGGMQIFVKT 403
LHLVL+L + VKT
Sbjct: 100 ILHLVLKLSDLQVLDVKT 117
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 76.2 bits (179), Expect = 8e-15
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 187
+IQ G Q+L+F G++L + DY + + + LHLVL+L + VKT GK
Sbjct: 62 RIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGNILHLVLKLSDLQVLDVKTTCGK 121
Query: 188 TITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 361
VE I VK +I K G + PD+Q +++ G++LED ++D +S LHL
Sbjct: 122 HCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLHL 181
Query: 362 VLR 370
++R
Sbjct: 182 LVR 184
Score = 56.4 bits (130), Expect = 7e-09
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +2
Query: 173 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 349
TL G I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 350 TLHLVLRLRGGMQIFVKT 403
LHLVL+L + VKT
Sbjct: 100 ILHLVLKLSDLQVLDVKT 117
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 66.9 bits (156), Expect = 5e-12
Identities = 29/72 (40%), Positives = 48/72 (66%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y+
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 335 IQKESTLHLVLR 370
++ TLHL++R
Sbjct: 84 LENGHTLHLIVR 95
Score = 49.6 bits (113), Expect = 8e-07
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 142
KI + G+P QQRLIF G+ L+D LS+Y+++ TLHL++R
Sbjct: 52 KIASETGVPVGQQRLIFRGRVLKDDHPLSEYHLENGHTLHLIVR 95
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 64.9 bits (151), Expect = 2e-11
Identities = 40/123 (32%), Positives = 68/123 (55%), Gaps = 4/123 (3%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLE-DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 187
+IQ +G +Q+L++ G+++ + + DY + LHLV+RL I V+T+ GK
Sbjct: 60 RIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGKLLHLVIRLSDLQAISVRTVDGK 119
Query: 188 TITLEVEPSDTIENVKAKIQDKE---GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 358
L VE S + VK +I KE GIP D + L G++L+D R ++D ++ +H
Sbjct: 120 EFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDLCQNGDNVIH 178
Query: 359 LVL 367
L++
Sbjct: 179 LLI 181
Score = 47.6 bits (108), Expect = 3e-06
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +2
Query: 173 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRTLSDYNIQKES 349
T+ G I V SD+I +VK +IQ +G +Q+L++ G+++ + + DY +
Sbjct: 38 TIAGSVIPKRVMESDSIASVKLRIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGK 97
Query: 350 TLHLVLRLRGGMQIFVKTL 406
LHLV+RL I V+T+
Sbjct: 98 LLHLVIRLSDLQAISVRTV 116
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 64.1 bits (149), Expect = 3e-11
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 1/120 (0%)
Frame = +2
Query: 20 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG-KTIT 196
D + + Q+ + + + E+ R+LS S RL QIFV+ ++G KTI
Sbjct: 54 DADHMAASAQQTLISWRSGENSRSLSSSGECSSSNRPESTRL----QIFVRMMSGGKTIV 109
Query: 197 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 376
+ E DT+E + +I+ K IP +QR+I+ GKQL+ +L+ Y+I+++++L LV R++
Sbjct: 110 IHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYYSIEQDASLQLVARMQ 169
Score = 40.3 bits (90), Expect = 5e-04
Identities = 18/46 (39%), Positives = 34/46 (73%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 148
+I+ K IP +QR+I+ GKQL+ +L+ Y+I+++++L LV R++
Sbjct: 124 RIEWKTKIPALEQRVIYKGKQLQRENSLTYYSIEQDASLQLVARMQ 169
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 63.7 bits (148), Expect = 5e-11
Identities = 36/123 (29%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 187
+IQ G +Q+L+F+G++L + + DY + S LHLVL+L + + V T GK
Sbjct: 62 RIQTCNGFRVRRQKLVFSGRELARNASRVKDYGVTGGSVLHLVLKLYDPLLVTVITTCGK 121
Query: 188 TITLEVEPSDTIENVKAKI-QDKEGIPP-DQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 361
V+ + +K +I ++ +G P D Q ++F G++L+D R + S +HL
Sbjct: 122 VFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGICKDGNSVIHL 181
Query: 362 VLR 370
+++
Sbjct: 182 LVK 184
Score = 49.6 bits (113), Expect = 8e-07
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +2
Query: 173 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 349
+++G T+ + + SD+I VK +IQ G +Q+L+F+G++L + + DY + S
Sbjct: 40 SVSGSTMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNASRVKDYGVTGGS 99
Query: 350 TLHLVLRLRGGMQIFVKT 403
LHLVL+L + + V T
Sbjct: 100 VLHLVLKLYDPLLVTVIT 117
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 56.4 bits (130), Expect = 7e-09
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 328
M+IFVKTL+G +EV+P+D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 329 YNIQKESTLHLVL 367
N+ + S + ++L
Sbjct: 61 NNVVENSFIVIML 73
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 54.0 bits (124), Expect = 4e-08
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 331
+Q FV+ L GK++TL P E +K +I ++ IP QRLI G Q+ DG +S
Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS-- 66
Query: 332 NIQKESTLHLVLRLRGG 382
Q ++T++LVL LRGG
Sbjct: 67 --QPDATVNLVLSLRGG 81
Score = 39.1 bits (87), Expect = 0.001
Identities = 24/58 (41%), Positives = 33/58 (56%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 184
+I ++ IP QRLI G Q+ DG +S Q ++T++LVL LRGG F L G
Sbjct: 38 RIFEQTKIPTHLQRLISGGYQISDGSAIS----QPDATVNLVLSLRGGKGGFGSLLRG 91
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 50.8 bits (116), Expect = 3e-07
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLS 325
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 326 DYNIQKESTLHLVLRLRGG 382
DY I+ H+ R+RGG
Sbjct: 61 DYKIKACDIFHMSDRMRGG 79
Score = 30.7 bits (66), Expect = 0.39
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 5 EAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLSDYNIQKESTLHLVLRLRGG 154
+ KI D G+ Q L GK ++ G T+ DY I+ H+ R+RGG
Sbjct: 27 KTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMDDYKIKACDIFHMSDRMRGG 79
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 50.4 bits (115), Expect = 5e-07
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 325
M+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 326 DYNIQKESTLHLVL 367
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 50.4 bits (115), Expect = 5e-07
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 325
M+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 326 DYNIQKESTLHLVL 367
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 50.4 bits (115), Expect = 5e-07
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = +2
Query: 167 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 346
++ G +++ T+E+ K + +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 347 STLHLV 364
T+H+V
Sbjct: 82 HTIHMV 87
Score = 41.9 bits (94), Expect = 2e-04
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +2
Query: 14 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 136
+ +P +QQRLI+ G+ L+D +TL Y +Q + T+H+V
Sbjct: 47 VAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTIHMV 87
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 50.0 bits (114), Expect = 6e-07
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
M +++ T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 335 IQKESTLHL 361
I ES L L
Sbjct: 61 ILFESRLLL 69
Score = 32.3 bits (70), Expect = 0.13
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 133
KI+ +GIP +Q L GK LED DY I ES L L
Sbjct: 29 KIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFESRLLL 69
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 50.0 bits (114), Expect = 6e-07
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = +2
Query: 167 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 346
V+ G ++ T+E+ K I +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 347 STLHLV 364
T+H+V
Sbjct: 82 HTVHMV 87
Score = 41.9 bits (94), Expect = 2e-04
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +2
Query: 14 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 136
I +P +QQRLI+ G+ L+D +TL Y +Q + T+H+V
Sbjct: 47 IAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTVHMV 87
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 49.6 bits (113), Expect = 8e-07
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +2
Query: 137 LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDG 313
L RG M+I VK+L GK L V +++ +++AK K + ++ + GK+L+D
Sbjct: 655 LPTRGSMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDE 714
Query: 314 RTLSDYNIQKESTLHLV 364
++L+ N+Q S +HL+
Sbjct: 715 KSLAAQNVQPNSLVHLI 731
Score = 31.1 bits (67), Expect = 0.30
Identities = 18/70 (25%), Positives = 39/70 (55%)
Frame = +2
Query: 50 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIEN 229
++ + GK+L+D ++L+ N+Q S +HL+ R + + + + L G+ +L P +
Sbjct: 703 KMFYKGKELDDEKSLAAQNVQPNSLVHLI-RTKVHLWPWAQKLPGENKSL--RPPGAFKK 759
Query: 230 VKAKIQDKEG 259
K+ + K+G
Sbjct: 760 -KSDLSTKDG 768
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 49.2 bits (112), Expect = 1e-06
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 331
+Q FV+ L GK++TL P E +K +I ++ IP QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 332 NIQKESTLHLVLRLRGG 382
Q ++T++LVL LRGG
Sbjct: 67 --QSDTTMNLVLSLRGG 81
Score = 32.3 bits (70), Expect = 0.13
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
+I ++ IP QRLI G Q+ +S Q ++T++LVL LRGG
Sbjct: 38 RIFEQTKIPTHLQRLISGGFQIPGASAIS----QSDTTMNLVLSLRGG 81
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 49.2 bits (112), Expect = 1e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 325
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 326 DYNIQKESTLHLVL 367
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 49.2 bits (112), Expect = 1e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 325
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 326 DYNIQKESTLHLVL 367
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 49.2 bits (112), Expect = 1e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 325
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 326 DYNIQKESTLHLVL 367
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 49.2 bits (112), Expect = 1e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 325
M++ VKTL G + V P+DTI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 326 DYNIQKESTLHLVL 367
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 48.8 bits (111), Expect = 1e-06
Identities = 22/71 (30%), Positives = 44/71 (61%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
M+I V T + ITL+V+ +T+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 335 IQKESTLHLVL 367
++ + L +++
Sbjct: 61 VKDDDLLMMMV 71
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 48.8 bits (111), Expect = 1e-06
Identities = 32/71 (45%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +2
Query: 71 QLEDGRTLSDYNIQKESTLHLVLRLRGG-----MQIFVKTLTGKTITLEVEPSDTIENVK 235
+LED D I E T LVL L G M IFV TL GKT LEV+ S+ I+ VK
Sbjct: 16 ELEDSSETIDIKIHAEPTRQLVLGLGQGPQGEMMSIFVSTLKGKTFNLEVKGSEIIQQVK 75
Query: 236 AKIQDKEGIPP 268
I D+ +PP
Sbjct: 76 NMIHDQ--VPP 84
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVK 235
M+I +KT GKTI LE+E S ++K
Sbjct: 1 MKILIKTEKGKTINLELEDSSETIDIK 27
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 48.0 bits (109), Expect = 2e-06
Identities = 26/71 (36%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 331
++I +K L T TL VE + + ++K I G+ P++Q RL+F G+ L++ + LSDY
Sbjct: 11 IRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDY 70
Query: 332 NIQKESTLHLV 364
++++ TL+LV
Sbjct: 71 HVEEGHTLYLV 81
Score = 37.5 bits (83), Expect = 0.003
Identities = 16/37 (43%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Frame = +2
Query: 29 GIPPDQQ-RLIFAGKQLEDGRTLSDYNIQKESTLHLV 136
G+ P++Q RL+F G+ L++ + LSDY++++ TL+LV
Sbjct: 45 GVSPERQPRLLFRGRVLKNDQRLSDYHVEEGHTLYLV 81
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 47.2 bits (107), Expect = 4e-06
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
M + + T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 335 IQKESTL 355
I ES L
Sbjct: 61 ILFESLL 67
Score = 31.9 bits (69), Expect = 0.17
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 127
KI+ +GIP +Q L GK LED DY I ES L
Sbjct: 29 KIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFESLL 67
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 46.4 bits (105), Expect = 7e-06
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
M++ V+ +G T ++++ DT+ K KI+ + IP +Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 335 IQKESTLHL 361
I + LHL
Sbjct: 61 ILQNPLLHL 69
Score = 31.9 bits (69), Expect = 0.17
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 133
KI+ + IP +Q + F GK LED + +++I + LHL
Sbjct: 29 KIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWDILQNPLLHL 69
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 44.4 bits (100), Expect = 3e-05
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
M +F +T +G T +E+ DT+ +K KI+ + IP +Q L+F G L+D +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 335 IQKESTLHLVL----RLRGGMQIF 394
I S + L + + R +Q+F
Sbjct: 61 ILNHSRIQLSISSPDQSRNNIQVF 84
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 43.2 bits (97), Expect = 7e-05
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 331
M+I + L GK L V +++ ++KAK K + ++ + GK+LED ++L++
Sbjct: 500 MKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQ 559
Query: 332 NIQKESTLHLV 364
N+Q S +HL+
Sbjct: 560 NVQPNSLVHLL 570
Score = 33.9 bits (74), Expect = 0.042
Identities = 16/50 (32%), Positives = 32/50 (64%)
Frame = +2
Query: 50 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 199
++ + GK+LED ++L++ N+Q S +HL LR + + + + L G+ +L
Sbjct: 542 KMFYMGKELEDEKSLAEQNVQPNSLVHL-LRTKVHLWPWAQKLPGENKSL 590
>At5g16090.1 68418.m01880 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 142
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 325
M+I VKTL G +EV+P+D++ VK I+ G P QQ LI ++L D T+
Sbjct: 1 MKIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTME 60
Query: 326 DYNIQKESTLHLVL 367
+ +S + +++
Sbjct: 61 ANKVFDKSVIAIII 74
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 41.9 bits (94), Expect = 2e-04
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +2
Query: 182 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 361
GK+I L V P T++++K+++Q + P Q+LIF GK L + TL ++ + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 362 V 364
+
Sbjct: 604 M 604
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 39.5 bits (88), Expect = 8e-04
Identities = 20/69 (28%), Positives = 38/69 (55%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
+++ ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 335 IQKESTLHL 361
I+ S + L
Sbjct: 62 IRHNSRILL 70
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 39.1 bits (87), Expect = 0.001
Identities = 20/69 (28%), Positives = 37/69 (53%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 334
+ + ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95
Query: 335 IQKESTLHL 361
I+ S + L
Sbjct: 96 IRHNSRILL 104
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 38.3 bits (85), Expect = 0.002
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 310
M +F +T +G +E+ DT+ +K KI+ + IP +Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 36.7 bits (81), Expect = 0.006
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 295
M+ V+ L G + +EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 36.7 bits (81), Expect = 0.006
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2
Query: 155 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 295
M+ V+ L G + LEV+ DT+ VK KI+ + IP +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 36.3 bits (80), Expect = 0.008
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +2
Query: 212 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 382
S+ + ++K KI + IP ++Q+L L+D +L+ YN+ L L LR RGG
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGG 782
Score = 31.1 bits (67), Expect = 0.30
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 154
KI + IP ++Q+L L+D +L+ YN+ L L LR RGG
Sbjct: 735 KIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGG 782
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 35.9 bits (79), Expect = 0.010
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 149 GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 319
G ++FV+T TG + LE++ SD VK K+Q P ++ L F L++ T
Sbjct: 39 GRRRVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 34.3 bits (75), Expect = 0.032
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 197 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 310
L +E + T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
Score = 29.1 bits (62), Expect = 1.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 29 GIPPDQQRLIFAGKQLED 82
G+ P QQRL+F GK+ ED
Sbjct: 103 GLEPKQQRLVFKGKERED 120
>At1g11970.1 68414.m01383 hypothetical protein
Length = 99
Score = 34.3 bits (75), Expect = 0.032
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 176 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 271
L+ K I +E++P D IE +K I+++ GIP D
Sbjct: 50 LSEKKIDIEIDPMDKIEQIKEGIEEEIGIPSD 81
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 32.3 bits (70), Expect = 0.13
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 167 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 310
V T++ + + ++ + T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 32.3 bits (70), Expect = 0.13
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +2
Query: 197 LEVEPSD-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTL 355
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L+D TLS I++ S +
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
Score = 27.9 bits (59), Expect = 2.8
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +2
Query: 11 KIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTL 127
++ + G+ P+ +LIFAGK L+D TLS I++ S +
Sbjct: 29 EVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
>At4g03430.1 68417.m00470 pre-mRNA splicing factor-related similar
to pre-mRNA splicing factor pre-mRNA splicing factor
prp1 (SP:Q12381) [Fission yeast]
Length = 1029
Score = 31.5 bits (68), Expect = 0.22
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Frame = +2
Query: 161 IFVKTLTGKTITLEVEP-SDTIENVKAKIQDKEGIPPDQQRL---------IFAGKQLED 310
+F+ GKT++++V P S TI + + +P R +F + D
Sbjct: 2 VFLSIPNGKTLSIDVNPNSTTISAFEQLAHQRSDVPQSFLRYSLRMRNPSRVFVDSKDSD 61
Query: 311 GRTLSDYNIQKESTLHLVLRLRGGMQ 388
LSD + + ST+ + + L GGMQ
Sbjct: 62 SILLSDLGVSRFSTVIIHVLLLGGMQ 87
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 30.7 bits (66), Expect = 0.39
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +2
Query: 80 DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 256
D L + +KES L L+ Q+ +K L TLE+E +E+V+A+I D E
Sbjct: 718 DSSKLKEQLAEKESKLFLLTEKDSKSQVQIKELEATVATLELE----LESVRARIIDLE 772
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 30.3 bits (65), Expect = 0.52
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 13/67 (19%)
Frame = +2
Query: 212 SDTIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQ------KEST 352
S T+ ++K K+ +DKE P + +LI AGK LE+ RTL++ + T
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIIT 87
Query: 353 LHLVLRL 373
+H+VLRL
Sbjct: 88 MHIVLRL 94
Score = 29.1 bits (62), Expect = 1.2
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
Frame = +2
Query: 17 QDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQ------KESTLHLVLRL 145
+DKE P + +LI AGK LE+ RTL++ + T+H+VLRL
Sbjct: 44 KDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIITMHIVLRL 94
>At5g56900.2 68418.m07101 CwfJ-like family protein / zinc finger
(CCCH-type) family protein contains Pfam domain,
PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and
similar), PF04677: Protein similar to CwfJ C-terminus 1,
PF04676: Protein similar to CwfJ C-terminus 2
Length = 593
Score = 29.1 bits (62), Expect = 1.2
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -2
Query: 392 IFAFHL*DGAPSEE*IPSECCNQKEYGHLQVAFQQKSVSAGQEGC--LLCLGS 240
++ ++L DGA + P++ + +Y V +QKS S G++ C +C GS
Sbjct: 262 LWPYNLQDGAAESKKRPNDSDSDSQYWRYDVPKRQKSGSQGEKLCFKFVCSGS 314
>At5g56900.1 68418.m07100 CwfJ-like family protein / zinc finger
(CCCH-type) family protein contains Pfam domain,
PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and
similar), PF04677: Protein similar to CwfJ C-terminus 1,
PF04676: Protein similar to CwfJ C-terminus 2
Length = 404
Score = 29.1 bits (62), Expect = 1.2
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -2
Query: 392 IFAFHL*DGAPSEE*IPSECCNQKEYGHLQVAFQQKSVSAGQEGC--LLCLGS 240
++ ++L DGA + P++ + +Y V +QKS S G++ C +C GS
Sbjct: 73 LWPYNLQDGAAESKKRPNDSDSDSQYWRYDVPKRQKSGSQGEKLCFKFVCSGS 125
>At4g31210.1 68417.m04432 DNA topoisomerase family protein similar to
DNA Topoisomerase I (SP:Q9X3X7) {Zymomonas mobilis}
Length = 1280
Score = 29.1 bits (62), Expect = 1.2
Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Frame = +2
Query: 56 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 235
++ G QL DG++ + LH+ +Q V GK T + P + VK
Sbjct: 760 LYEGVQLSDGKSAGLITYMRTDGLHIADEAIKDIQSLVAERYGKNFTSD-SPRKYFKKVK 818
Query: 236 AKIQDKEGI-PPDQQRLIFAGKQLEDGRTLSDYNI 337
+ E I P D +RL L D +L Y +
Sbjct: 819 NAQEAHEAIRPTDIRRLPSTIASLLDADSLKLYTL 853
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 28.7 bits (61), Expect = 1.6
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 206 EPSDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 361
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At1g03970.1 68414.m00383 G-box binding factor 4 (GBF4) identical to
G-box binding factor 4 (GBF4) SP:P42777 from
[Arabidopsis thaliana]
Length = 270
Score = 28.7 bits (61), Expect = 1.6
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +2
Query: 185 KTITL-EVEPSD--TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 355
KTI + E EP D T+E+ AK + EG + I + DG D+ +Q+ S+
Sbjct: 100 KTIMMKEEEPEDIMTLEDFLAKAEMDEGASDEIDVKIPTERLNNDGSYTFDFPMQRHSSF 159
Query: 356 HLVLRLRGG 382
+V GG
Sbjct: 160 QMVEGSMGG 168
>At5g47250.1 68418.m05826 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 843
Score = 27.9 bits (59), Expect = 2.8
Identities = 18/75 (24%), Positives = 35/75 (46%)
Frame = +2
Query: 53 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 232
L+ AG LE + + +++ ++ L +V R G + VKT G + +V T+ +
Sbjct: 455 LVGAGLLLESNKKVYMHDMIRDMALWIVSEFRDGERYVVKTDAGLSQLPDVTDWTTVTKM 514
Query: 233 KAKIQDKEGIPPDQQ 277
+ + IP D +
Sbjct: 515 SLFNNEIKNIPDDPE 529
>At4g10070.1 68417.m01647 KH domain-containing protein DNA-directed
RNA polymerase (EC 2.7.7.6) II largestchain - mouse,
PIR2:A28490
Length = 725
Score = 27.9 bits (59), Expect = 2.8
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 85 PDSF*L*HSERIYPPLGPSSE-RWNANICEDPHWQDYHP*G 204
P S+ +++ Y P GP +W + PH DYHP G
Sbjct: 348 PSSYSGGYNQPAYRPQGPGGPPQWGSRGPHAPHPYDYHPRG 388
>At2g01820.1 68415.m00113 leucine-rich repeat protein kinase,
putative similar to protein kinase TMK1
gi|166888|gb|AAA32876; contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain
Length = 943
Score = 26.6 bits (56), Expect = 6.4
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -1
Query: 69 FPAKISLCWSGGMPSLSWILASC 1
+P K++ W G P ++W+ +C
Sbjct: 339 YPVKLAESWKGNNPCVNWVGITC 361
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 26.2 bits (55), Expect = 8.5
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 176 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 313
+TG T E DTI K ++ G P + ++F+G DG
Sbjct: 323 VTGMRTTKEARIGDTIYRTKTTVEPLPGFKP-VRHMVFSGVYPADG 367
>At3g32270.1 68416.m04114 hypothetical protein similar to putative
replication protein A1 GB:AAC95163 GI:4006821 from
[Arabidopsis thaliana]
Length = 209
Score = 26.2 bits (55), Expect = 8.5
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 403 GLHEYLHSTSETEHQVKSRFLLNVVIRKSTAI 308
G++ L+ T H+ K F + V+RK+TA+
Sbjct: 78 GVYPNLNPVRVTSHKFKICFFKDTVVRKTTAV 109
>At2g32410.1 68415.m03960 auxin-resistance protein, putative strong
similarity to SP|P42744 Auxin-resistance protein AXR1
{Arabidopsis thaliana}; contains Pfam profile PF00899:
ThiF family
Length = 523
Score = 26.2 bits (55), Expect = 8.5
Identities = 16/64 (25%), Positives = 33/64 (51%)
Frame = +2
Query: 44 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTI 223
Q L+ A + +ED D I +E+ + LVL G+ FV+ + +E +P ++
Sbjct: 117 QFTLVIATQLVEDSMVKLD-RICREANVMLVLARSYGLTGFVRISVKEHTAIETKPDHSL 175
Query: 224 ENVK 235
++++
Sbjct: 176 DDLR 179
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,033,456
Number of Sequences: 28952
Number of extensions: 217215
Number of successful extensions: 813
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 605614832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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