Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_E03
         (506 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   2.6  
AY745218-1|AAU93485.1|  159|Anopheles gambiae cytochrome P450 pr...    24   3.4  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   5.9  
AY745222-1|AAU93489.1|  276|Anopheles gambiae cytochrome P450 pr...    23   7.9  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      23   7.9  

>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -3

Query: 288 RILDARLGPRRRGTSPSVSPGISCAPLRTMTRAKTERLASTMQPR 154
           RI+DA          P +  G + APLR++   + +++A++M PR
Sbjct: 394 RIVDALFPVHPPVEWPDLGVG-NMAPLRSIGLTELDQIAASMHPR 437


>AY745218-1|AAU93485.1|  159|Anopheles gambiae cytochrome P450
           protein.
          Length = 159

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 7   RAAGIRHEGQAVLPYETGS 63
           R  G+RH+  A+LP+  GS
Sbjct: 118 RFEGLRHDPFALLPFSAGS 136


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 213 PLRTMTRAKTERLASTMQPR 154
           PLR +T  + + +AS MQPR
Sbjct: 413 PLREVTDLELQIIASGMQPR 432


>AY745222-1|AAU93489.1|  276|Anopheles gambiae cytochrome P450
           protein.
          Length = 276

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -2

Query: 91  QETYTAVSQDSLFHREALLVPRAEFLQ 11
           ++ +  + Q ++ HRE+  V + +FLQ
Sbjct: 37  EQFFLQLCQSTVLHRESYQVVKRDFLQ 63


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = +2

Query: 41  CFPMKQGVLTNSRVRLLMSKGHSCYRPRRDG 133
           CF   + VL     +L+    H C  P + G
Sbjct: 97  CFVSVEAVLDEETKQLVPEYSHGCMSPEQGG 127


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,421
Number of Sequences: 2352
Number of extensions: 10246
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)