Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_E02
(406 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 240 4e-64
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 238 1e-63
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 238 1e-63
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 237 2e-63
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 237 2e-63
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 236 6e-63
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 235 8e-63
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 196 7e-51
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 162 9e-41
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 155 1e-38
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 7e-27
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 105 1e-23
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 6e-23
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 102 1e-22
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 101 3e-22
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 3e-16
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 5e-15
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 74 4e-14
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 4e-14
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 71 3e-13
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 69 2e-12
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 68 3e-12
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 60 9e-10
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 33 0.089
SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.089
SB_33002| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.15
SB_51769| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.20
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 29 1.1
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_47730| Best HMM Match : Ion_trans (HMM E-Value=1e-14) 29 1.9
SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.4
SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32) 27 4.4
SB_3316| Best HMM Match : Keratin_B2 (HMM E-Value=0.32) 27 4.4
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 27 5.8
SB_23899| Best HMM Match : TNFR_c6 (HMM E-Value=7.1e-09) 27 5.8
SB_11681| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_49595| Best HMM Match : POPLD (HMM E-Value=1.1) 27 5.8
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 27 5.8
SB_55214| Best HMM Match : DUF1665 (HMM E-Value=3) 27 7.7
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 240 bits (587), Expect = 4e-64
Identities = 106/110 (96%), Positives = 109/110 (99%)
Frame = +2
Query: 77 YKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 256
Y+ RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 432 YEERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 491
Query: 257 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 492 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 541
Score = 239 bits (585), Expect = 6e-64
Identities = 105/108 (97%), Positives = 108/108 (100%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 262
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQL+TGKEDAANNYARGHY
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHY 108
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 238 bits (583), Expect = 1e-63
Identities = 105/108 (97%), Positives = 108/108 (100%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 262
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 108
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 238 bits (582), Expect = 1e-63
Identities = 106/107 (99%), Positives = 107/107 (100%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 265
RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 266 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 126 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 172
Score = 238 bits (582), Expect = 1e-63
Identities = 105/108 (97%), Positives = 108/108 (100%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 262
+RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 693
Score = 165 bits (401), Expect = 1e-41
Identities = 73/81 (90%), Positives = 78/81 (96%)
Frame = +2
Query: 62 VQKTQYKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 241
V + +Y+ RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFF
Sbjct: 507 VPRVEYQ-RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFF 565
Query: 242 SETGAGKHVPRAVFVDLEPTV 304
SETGAGKHVPRAVFVDLEPTV
Sbjct: 566 SETGAGKHVPRAVFVDLEPTV 586
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 237 bits (581), Expect = 2e-63
Identities = 105/107 (98%), Positives = 107/107 (100%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 265
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 266 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 107
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 237 bits (581), Expect = 2e-63
Identities = 105/110 (95%), Positives = 108/110 (98%)
Frame = +2
Query: 77 YKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 256
Y+ RECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 803 YEERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 862
Query: 257 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
GKHVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 863 GKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 912
Score = 235 bits (574), Expect = 1e-62
Identities = 102/107 (95%), Positives = 107/107 (100%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 265
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDD+FNTFF+ETGAGKH
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 266 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
VPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 479
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 236 bits (577), Expect = 6e-63
Identities = 101/110 (91%), Positives = 109/110 (99%)
Frame = +2
Query: 77 YKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 256
Y+ REC+S+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 417 YEERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 476
Query: 257 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
GKHVPRAVFVDLEP+V+DE+RTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 477 GKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHY 526
Score = 205 bits (501), Expect = 9e-54
Identities = 90/93 (96%), Positives = 92/93 (98%)
Frame = +2
Query: 128 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVV 307
+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKHVPRAVF DLEPTVV
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 308 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
DEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 93
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 235 bits (576), Expect = 8e-63
Identities = 104/108 (96%), Positives = 107/108 (99%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 262
MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG+GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
HVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 108
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 196 bits (477), Expect = 7e-51
Identities = 92/108 (85%), Positives = 94/108 (87%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 262
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKT GGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
HVPRAVFVDLEPTVV PEQLITGKEDAANNYARGHY
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHY 98
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 162 bits (394), Expect = 9e-41
Identities = 71/79 (89%), Positives = 75/79 (94%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 262
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTI GGDDSFNTFFSETG GK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 263 HVPRAVFVDLEPTVVDEVR 319
HVPRAVFVDLEP+VV ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 155 bits (377), Expect = 1e-38
Identities = 67/73 (91%), Positives = 73/73 (100%)
Frame = +2
Query: 188 MPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG 367
MP+DKTIGGGDDSFNTFF+ETGAGKHVPRAVFVDLEPTV+DE+RTGTYRQLFHPEQL++G
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSG 60
Query: 368 KEDAANNYARGHY 406
KEDAANNYARGHY
Sbjct: 61 KEDAANNYARGHY 73
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 116 bits (279), Expect = 7e-27
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 262
MREC+S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D++ DDSF+TFFSET +GK
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGK 255
Query: 263 H 265
H
Sbjct: 256 H 256
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 105 bits (252), Expect = 1e-23
Identities = 49/113 (43%), Positives = 67/113 (59%)
Frame = +2
Query: 68 KTQYKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 247
K +KMRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNE 266
Query: 248 TGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHY
Sbjct: 267 ATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 319
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 103 bits (247), Expect = 6e-23
Identities = 45/55 (81%), Positives = 50/55 (90%)
Frame = +2
Query: 242 SETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
SE AGK+VPRAV VDLEPTV+DEVRTG YR L+HPEQ+I+GKEDAANNYARGHY
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHY 1019
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 102 bits (245), Expect = 1e-22
Identities = 46/108 (42%), Positives = 66/108 (61%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 262
MRE +S+ GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
+VPR+V +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHY
Sbjct: 59 YVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 106
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 101 bits (241), Expect = 3e-22
Identities = 46/108 (42%), Positives = 64/108 (59%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 262
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHY
Sbjct: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 106
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 81.4 bits (192), Expect = 3e-16
Identities = 38/93 (40%), Positives = 53/93 (56%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 262
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 263 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 361
+VPRA+ VDLEP +D VR+G + Q+F P+ +
Sbjct: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFV 91
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 77.0 bits (181), Expect = 5e-15
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +2
Query: 302 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
+ DEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 45
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 74.1 bits (174), Expect = 4e-14
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2
Query: 311 EVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
EVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHY 33
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 74.1 bits (174), Expect = 4e-14
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2
Query: 311 EVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
EVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHY 33
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 71.3 bits (167), Expect = 3e-13
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +2
Query: 311 EVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
E+RTGTYRQLFHPEQL++GKEDAANNYARGHY
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHY 33
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 68.5 bits (160), Expect = 2e-12
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = +2
Query: 311 EVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
EVR GTYR LFHP+QLITGKEDAANNYARGHY
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHY 33
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 67.7 bits (158), Expect = 3e-12
Identities = 27/50 (54%), Positives = 37/50 (74%)
Frame = +2
Query: 257 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHY
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 51
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 59.7 bits (138), Expect = 9e-10
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = +2
Query: 257 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
G++VPR++ VDLEP +D VR G +F P+ + + AANN+A+GHY
Sbjct: 13 GRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHY 62
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 33.1 bits (72), Expect = 0.089
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 272 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNY 391
RAV +D+E VV+ + G +F +QLIT NN+
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 33.1 bits (72), Expect = 0.089
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +3
Query: 90 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTF 269
SAS A + + + + S + ++ A + QL + ETTP+T +SA A+T
Sbjct: 196 SASSVIQASSSTSAVVASSSAVIMTNAPKITTTEQLATTTAAETTPTTTTSASTTTATTT 255
Query: 270 PVPSSSI 290
++S+
Sbjct: 256 KATTTSV 262
>SB_33002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 55
Score = 32.3 bits (70), Expect = 0.15
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = -1
Query: 403 VTTSIVVCGILLTSDKLFWMKQLSVCASADLV 308
++T IVV IL SDKL +++L+V +SA+L+
Sbjct: 1 MSTGIVVSSILFASDKLLRVEKLAVSSSANLI 32
>SB_51769| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 31.9 bits (69), Expect = 0.20
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = -1
Query: 403 VTTSIVVCGILLTSDKLFWMKQLSVC 326
++TS++V IL SD+LF M++L++C
Sbjct: 1 MSTSVIVGSILFASDELFRMEELAIC 26
>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 904
Score = 29.5 bits (63), Expect = 1.1
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDG-QMPTDKT-IGGGDDSFNTFFSETGAG 259
+ C S + +GV+ G W L + GIQP P+D + D +NT +
Sbjct: 237 KPCASKKILASGVRYGKLTWTLGAMTSGIQPSTVSAPSDDSDCNVLCDQYNTVLNHF-IE 295
Query: 260 KHVP-RAVFVDLEP 298
KH P R V L P
Sbjct: 296 KHAPVRTFSVTLRP 309
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 143 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 247
WE+ EHGI PDGQ T D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQC-TAVQSKIQTDRLNVYFDE 35
>SB_47730| Best HMM Match : Ion_trans (HMM E-Value=1e-14)
Length = 904
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +3
Query: 120 ESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSI 290
E S+ +C S A+N + L+ P+ + T+ +RSS+ + P+P+SSI
Sbjct: 605 EGGSQQWPHTCTPTSDATNGLP-ASLSLPTVIHTSARSRSSSSSSASLLTPIPTSSI 660
>SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 164 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 280
+GI+PDGQ D+ +NT F G P A+
Sbjct: 708 NGIRPDGQGLVDEGFKTASGIYNTCFERLGMNFQTPEAI 746
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 27.5 bits (58), Expect = 4.4
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 207 SGVETTPSTRSSARPELASTFPVPSSS-ILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQ 383
S VETTPST S +P + FPV +SS ++P+ T + ++ +S + P+
Sbjct: 871 SSVETTPST-VSTKPR--TIFPVAASSRTISPVETTPETIPPVET--KSTTISAIESSPR 925
Query: 384 TTMLVVT 404
T V T
Sbjct: 926 TASTVET 932
>SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32)
Length = 1027
Score = 27.5 bits (58), Expect = 4.4
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 269 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 406
P V+ L T VD+V+TG PEQL+ K++A+ RG +
Sbjct: 126 PETVYQLLTNTYVDDVQTGG----DDPEQLLRFKQEASEIMERGGF 167
>SB_3316| Best HMM Match : Keratin_B2 (HMM E-Value=0.32)
Length = 355
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 93 ASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARP 251
A+LYT+ RS + I S+ + +V + RPS ++T T + RP
Sbjct: 245 ATLYTIRPSSHRSTLVTSCTIRPSSHRSTLVTSCIIRPSSHKSTLVTLCTIRP 297
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = -3
Query: 398 HEHSCLRHP---PYQ**VVLDETTVCMCQCGP 312
H H C R P PY V++ VCMCQ P
Sbjct: 5594 HCHPCQRSPCTVPYSRCVLIRGQAVCMCQSCP 5625
>SB_23899| Best HMM Match : TNFR_c6 (HMM E-Value=7.1e-09)
Length = 533
Score = 27.1 bits (57), Expect = 5.8
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = +3
Query: 225 PSTRSSARPELAST--FPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTML 395
P+TR S E S+ P P+SS+ L +TRS H S +S TT L
Sbjct: 234 PTTRRSTSTESTSSQSTPSPASSVTQLLDVTRSKTGHDTSSVTTLPVSQTPTSDPTTQL 292
>SB_11681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 27.1 bits (57), Expect = 5.8
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = -1
Query: 280 DGTGNVLASSGLAEERVEGVV--STPDGLVSWHLTIRLDAVLKAIQLPAGISDLD--SGL 113
DG G + + GLAEE+ +G+ + DG+ + D + K + GI+DL G+
Sbjct: 278 DGDGVTVQADGLAEEKADGIADGTKADGMAD---ETKADGMAKETKAD-GIADLTKADGI 333
Query: 112 ANV 104
A+V
Sbjct: 334 ADV 336
>SB_49595| Best HMM Match : POPLD (HMM E-Value=1.1)
Length = 1141
Score = 27.1 bits (57), Expect = 5.8
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 144 GSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPE 254
GS +AL+ ++ RCQ P G + +SA P+
Sbjct: 956 GSLMALAAGASADARCQREEPRGSTSAQPAGTSAEPD 992
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 27.1 bits (57), Expect = 5.8
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 144 GSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPE 254
GS +AL+ ++ RCQ P G + +SA P+
Sbjct: 1142 GSLMALAAGASADARCQREEPRGSTSAQPAGTSAEPD 1178
>SB_55214| Best HMM Match : DUF1665 (HMM E-Value=3)
Length = 452
Score = 26.6 bits (56), Expect = 7.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 93 ASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTR 236
+S Y ES+ E S + TA + RC+L R +G+E P +
Sbjct: 41 SSHYRTLPSESQRERALDSSESALTAGSEDSRCRLDRLTGMEVNPEVK 88
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,250,182
Number of Sequences: 59808
Number of extensions: 308841
Number of successful extensions: 1000
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 727815563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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