Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_E01
         (550 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    24   2.9  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   8.8  

>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = +3

Query: 33  LISQLISLIVIDNVYKNYVYCYIQTNRYLVFV 128
           +IS++ISL V  +VY ++V+  I  + + +F+
Sbjct: 362 VISRVISLTVYASVYSHWVFLVIILHWFSMFL 393


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 42  QLISLIVIDNVYKNY 86
           Q ISL+++D  +KNY
Sbjct: 145 QDISLLIVDECHKNY 159


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,288
Number of Sequences: 2352
Number of extensions: 9155
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)