Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_E01
         (550 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-3171|AAS64724.1|  646|Drosophila melanogaster CG10481-P...    28   7.2  
AE014134-3170|AAF53851.2|  538|Drosophila melanogaster CG10481-P...    28   7.2  

>AE014134-3171|AAS64724.1|  646|Drosophila melanogaster CG10481-PB,
           isoform B protein.
          Length = 646

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -1

Query: 367 SSIFFFHFQKLLVSAITNSWKKAIMAVVDIYYLV*KYLS*CYYLGRNRGY 218
           S  FF +F    V+   + W   ++ +VD YYLV  Y+   Y+L R+  +
Sbjct: 381 SPFFFVNFADFWVA---DQWTSLVVTIVDHYYLVRFYVR--YFLDRSDAF 425


>AE014134-3170|AAF53851.2|  538|Drosophila melanogaster CG10481-PA,
           isoform A protein.
          Length = 538

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -1

Query: 367 SSIFFFHFQKLLVSAITNSWKKAIMAVVDIYYLV*KYLS*CYYLGRNRGY 218
           S  FF +F    V+   + W   ++ +VD YYLV  Y+   Y+L R+  +
Sbjct: 381 SPFFFVNFADFWVA---DQWTSLVVTIVDHYYLVRFYVR--YFLDRSDAF 425


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,259,803
Number of Sequences: 53049
Number of extensions: 389945
Number of successful extensions: 541
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 541
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)