Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_E01
         (550 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   4.7  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   8.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.2  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -1

Query: 352 FHFQKLLVSAITNSWKKAIMAVVDIYYLV*KYLS*CYY 239
           FH Q+LL     NS  K    ++ IY ++  Y+S  +Y
Sbjct: 301 FHAQRLLAVYAQNSKDKPEDVLIIIYTIL-TYMSGVFY 337


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 389 SKILKIITYKHNPSLYYSK 445
           +K+ K  TY +N S+Y+ +
Sbjct: 251 AKMAKAFTYTYNYSMYWGQ 269


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 161  KWKYVRLKGIS*PHLFHTNVSP 226
            +WK   +KG     LFH +V P
Sbjct: 1019 QWKIWPMKGEEKSRLFHYSVVP 1040


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,645
Number of Sequences: 438
Number of extensions: 3254
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)