Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_D24
         (458 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    25   1.7  
AY062197-1|AAL58558.1|  150|Anopheles gambiae cytochrome P450 CY...    23   3.9  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   5.1  
AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450 CY...    22   9.0  
AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450 pr...    22   9.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    22   9.0  

>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 165 YFVKEDTWRAADDKQQLKRMQGKLNVTFHEVT 260
           Y++ + TW   DDK  L+ M  +L +    +T
Sbjct: 142 YYLMDLTWSMRDDKATLESMGSQLALALANLT 173


>AY062197-1|AAL58558.1|  150|Anopheles gambiae cytochrome P450
           CYP4C27 protein.
          Length = 150

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 16/68 (23%), Positives = 28/68 (41%)
 Frame = +3

Query: 126 FSFVVHGDQQDVFYFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADVKIHGRT 305
           F   +H D Q+      E  +   DD+    +   +L +    + E+ R Y  V   GRT
Sbjct: 22  FLLALHPDVQERVCEEIESIFPPGDDRPATMQDLNELKLLERCIKEALRLYPSVSFFGRT 81

Query: 306 SIVNLRYG 329
              +++ G
Sbjct: 82  LSEDVQLG 89


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 42  AVVTAVPSANAIYRDVYTSVFNR 110
           A+ TA+    A++R +Y   F+R
Sbjct: 460 ALKTAIKKHTAVFRSIYQGCFDR 482


>AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450
           CYPm3r9 protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = +3

Query: 186 WRAADDKQQLKRMQGKLNVTFHEVTESGRSYAD 284
           WR+  +K       GK+ + F  +  +G+ + D
Sbjct: 128 WRSLRNKLSPTFTSGKMKMMFPTIVTAGKQFKD 160


>AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 431 EPIAQCFAFAMPGFPNSGST 372
           E +AQ F F + GF  S +T
Sbjct: 294 EIVAQAFVFFLGGFETSSTT 313


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 339 EREKQRLLHHARATAIRKAWHRERE 413
           EREK+R L   R    R+   RE+E
Sbjct: 467 EREKERELREQREREQREKEQREKE 491


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 471,379
Number of Sequences: 2352
Number of extensions: 9785
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)