Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_D24
(458 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK056531-1|BAB71206.1| 730|Homo sapiens protein ( Homo sapiens ... 64 3e-10
BX640737-1|CAE45850.1| 1399|Homo sapiens hypothetical protein pr... 62 7e-10
BX537983-1|CAD97943.1| 1071|Homo sapiens hypothetical protein pr... 62 7e-10
AB037723-1|BAA92540.3| 2016|Homo sapiens KIAA1302 protein protein. 62 7e-10
AK027473-1|BAB55138.1| 625|Homo sapiens protein ( Homo sapiens ... 62 9e-10
AK001748-1|BAA91879.1| 964|Homo sapiens protein ( Homo sapiens ... 62 9e-10
AK001336-1|BAA91633.1| 1045|Homo sapiens protein ( Homo sapiens ... 62 9e-10
AB040888-1|BAA95979.2| 2450|Homo sapiens KIAA1455 protein protein. 62 9e-10
Z85995-1|CAI42721.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog... 58 1e-08
Z83823-1|CAI42742.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog... 58 1e-08
Z81008-1|CAI42710.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog... 58 1e-08
AL031075-1|CAI43065.1| 2725|Homo sapiens odz, odd Oz/ten-m homol... 58 1e-08
AL023878-1|CAI42975.1| 2725|Homo sapiens odz, odd Oz/ten-m homol... 58 1e-08
AL022718-3|CAI42154.1| 2725|Homo sapiens odz, odd Oz/ten-m homol... 58 1e-08
AF100772-1|AAF04723.1| 2725|Homo sapiens tenascin-M1 protein. 58 1e-08
AL080120-1|CAB45719.1| 184|Homo sapiens hypothetical protein pr... 57 3e-08
AB032953-1|BAA86441.2| 2144|Homo sapiens KIAA1127 protein protein. 44 2e-04
BC043277-1|AAH43277.1| 839|Homo sapiens SYNJ2 protein protein. 34 0.20
AY152396-1|AAN73051.1| 1288|Homo sapiens synaptojanin 2A protein. 34 0.20
AL139330-4|CAI12983.1| 1496|Homo sapiens synaptojanin 2 protein. 34 0.20
AF318616-1|AAG46036.1| 1496|Homo sapiens synaptojanin 2 protein. 34 0.20
AF039945-1|AAD02178.1| 1443|Homo sapiens synaptojanin 2B protein. 34 0.20
AB002346-1|BAA20805.2| 1443|Homo sapiens KIAA0348 protein protein. 34 0.20
AM279490-1|CAK50609.1| 117|Homo sapiens immunoglobulin A heavy ... 33 0.47
EF088216-1|ABK41888.1| 687|Homo sapiens polyA specific ribonucl... 31 2.5
BC128180-1|AAI28181.1| 687|Homo sapiens PAN3 polyA specific rib... 31 2.5
BC128179-1|AAI28180.1| 553|Homo sapiens PAN3 protein protein. 31 2.5
BC113426-1|AAI13427.1| 617|Homo sapiens zinc finger protein 221... 31 2.5
BC111981-1|AAI11982.1| 617|Homo sapiens zinc finger protein 221... 31 2.5
BC024318-1|AAH24318.1| 442|Homo sapiens PAN3 protein protein. 31 2.5
AL356915-4|CAI12450.2| 741|Homo sapiens PAN3 polyA specific rib... 31 2.5
AL356915-3|CAI12449.2| 687|Homo sapiens PAN3 polyA specific rib... 31 2.5
AL138712-3|CAM20921.1| 741|Homo sapiens PAN3 polyA specific rib... 31 2.5
AL138712-2|CAI14848.1| 687|Homo sapiens PAN3 polyA specific rib... 31 2.5
AK131556-1|BAD18690.1| 472|Homo sapiens protein ( Homo sapiens ... 31 2.5
AK091307-1|BAC03632.1| 126|Homo sapiens protein ( Homo sapiens ... 31 2.5
AF187987-1|AAF04103.1| 617|Homo sapiens zinc finger protein ZNF... 31 2.5
AC035150-2|AAF63029.1| 617|Homo sapiens Zinc finger protein ZNF... 31 2.5
AB109552-1|BAD93184.1| 741|Homo sapiens PABP1-DEPENDENT POLY(A)... 31 2.5
AB107584-1|BAD02262.1| 687|Homo sapiens PABP1-DEPENDENT POLY(A)... 31 2.5
Y00057-1|CAA68266.1| 761|Homo sapiens protein ( Human mRNA for ... 30 4.4
X64072-1|CAA45427.1| 769|Homo sapiens integrin beta-2 subunit p... 30 4.4
M15395-1|AAA59490.1| 769|Homo sapiens LYAM1 protein. 30 4.4
BC021077-1|AAH21077.1| 758|Homo sapiens ITGB2 protein protein. 30 4.4
BC005861-1|AAH05861.1| 769|Homo sapiens ITGB2 protein protein. 30 4.4
AL163300-3|CAB90553.1| 769|Homo sapiens cell surface adhesion g... 30 4.4
AK222505-1|BAD96225.1| 769|Homo sapiens integrin beta chain, be... 30 4.4
AF016894-1|AAL14027.1| 56|Homo sapiens integrin beta 2 protein. 30 4.4
AB208909-1|BAD92146.1| 475|Homo sapiens integrin beta chain, be... 30 4.4
BX640905-1|CAE45950.1| 1706|Homo sapiens hypothetical protein pr... 29 7.7
AY137776-1|AAN11306.1| 1706|Homo sapiens DNA strand-exchange pro... 29 7.7
AL133623-1|CAB63749.1| 1159|Homo sapiens hypothetical protein pr... 29 7.7
>AK056531-1|BAB71206.1| 730|Homo sapiens protein ( Homo sapiens
cDNA FLJ31969 fis, clone NT2RP7008013, highly similar to
Mus musculus mRNA for Ten-m4. ).
Length = 730
Score = 63.7 bits (148), Expect = 3e-10
Identities = 47/148 (31%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Frame = +3
Query: 36 GRAVVTAVPSANAIYRDVYTSVFNRSHLLP-FSFVVHGDQQDVFYFVK----EDTWRAAD 200
GR + AN R V ++ N +H L F + G D YFVK E
Sbjct: 538 GRVTTDIISVANEDGRRV-AAILNHAHYLENLHFTIDG--VDTHYFVKPGPSEGDLAILG 594
Query: 201 DKQQLKRMQGKLNVTFHEVTE--SGRS--YADVKIHGRTSIVNLRYGTSAEREKQRLLHH 368
+ ++ +NVT ++ SGR+ Y D+++ +N RYGT+ + EK R+L
Sbjct: 595 LSGGRRTLENGVNVTVSQINTVLSGRTRRYTDIQLQYGALCLNTRYGTTLDEEKARVLEL 654
Query: 369 ARATAIRKAWHREREALRNGFGGSIDWS 452
AR A+R+AW RE++ LR G G W+
Sbjct: 655 ARQRAVRQAWAREQQRLREGEEGLRAWT 682
>BX640737-1|CAE45850.1| 1399|Homo sapiens hypothetical protein
protein.
Length = 1399
Score = 62.5 bits (145), Expect = 7e-10
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Frame = +3
Query: 36 GRAVVTAVPSANAIYRDVYTSVFNRSHLLP-FSFVVHGDQQDVFYFVK----EDTWRAAD 200
GR + AN R V ++ N +H L F + G D YFVK E
Sbjct: 1207 GRVTTDIISVANEDGRRV-AAILNHAHYLENLHFTIDG--VDTHYFVKPGPSEGDLAILG 1263
Query: 201 DKQQLKRMQGKLNVTFHEVTE--SGRS--YADVKIHGRTSIVNLRYGTSAEREKQRLLHH 368
+ ++ +NVT ++ +GR+ Y D+++ +N RYGT+ + EK R+L
Sbjct: 1264 LSGGRRTLENGVNVTVSQINTVLNGRTRRYTDIQLQYGALCLNTRYGTTLDEEKARVLEL 1323
Query: 369 ARATAIRKAWHREREALRNGFGGSIDWS 452
AR A+R+AW RE++ LR G G W+
Sbjct: 1324 ARQRAVRQAWAREQQRLREGEEGLRAWT 1351
>BX537983-1|CAD97943.1| 1071|Homo sapiens hypothetical protein
protein.
Length = 1071
Score = 62.5 bits (145), Expect = 7e-10
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Frame = +3
Query: 36 GRAVVTAVPSANAIYRDVYTSVFNRSHLLP-FSFVVHGDQQDVFYFVK----EDTWRAAD 200
GR + AN R V ++ N +H L F + G D YFVK E
Sbjct: 879 GRVTTDIISVANEDGRRV-AAILNHAHYLENLHFTIDG--VDTHYFVKPGPSEGDLAILG 935
Query: 201 DKQQLKRMQGKLNVTFHEVTE--SGRS--YADVKIHGRTSIVNLRYGTSAEREKQRLLHH 368
+ ++ +NVT ++ +GR+ Y D+++ +N RYGT+ + EK R+L
Sbjct: 936 LSGGRRTLENGVNVTVSQINTVLNGRTRRYTDIQLQYGALCLNTRYGTTLDEEKARVLEL 995
Query: 369 ARATAIRKAWHREREALRNGFGGSIDWS 452
AR A+R+AW RE++ LR G G W+
Sbjct: 996 ARQRAVRQAWAREQQRLREGEEGLRAWT 1023
>AB037723-1|BAA92540.3| 2016|Homo sapiens KIAA1302 protein protein.
Length = 2016
Score = 62.5 bits (145), Expect = 7e-10
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Frame = +3
Query: 36 GRAVVTAVPSANAIYRDVYTSVFNRSHLLP-FSFVVHGDQQDVFYFVK----EDTWRAAD 200
GR + AN R V ++ N +H L F + G D YFVK E
Sbjct: 1824 GRVTTDIISVANEDGRRV-AAILNHAHYLENLHFTIDG--VDTHYFVKPGPSEGDLAILG 1880
Query: 201 DKQQLKRMQGKLNVTFHEVTE--SGRS--YADVKIHGRTSIVNLRYGTSAEREKQRLLHH 368
+ ++ +NVT ++ +GR+ Y D+++ +N RYGT+ + EK R+L
Sbjct: 1881 LSGGRRTLENGVNVTVSQINTVLNGRTRRYTDIQLQYGALCLNTRYGTTLDEEKARVLEL 1940
Query: 369 ARATAIRKAWHREREALRNGFGGSIDWS 452
AR A+R+AW RE++ LR G G W+
Sbjct: 1941 ARQRAVRQAWAREQQRLREGEEGLRAWT 1968
>AK027473-1|BAB55138.1| 625|Homo sapiens protein ( Homo sapiens
cDNA FLJ14567 fis, clone NT2RM4000386, highly similar to
Mus musculus ODZ3 (Odz3) mRNA. ).
Length = 625
Score = 62.1 bits (144), Expect = 9e-10
Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Frame = +3
Query: 6 RGILVSRNSRGRAVVTAVPSANAIYRDVYTSVFNRSHLLPFSFVVHGDQQDVFYFVKEDT 185
+G++++ S+GR + AN V + N +L F + G +D YF+K T
Sbjct: 424 KGVMLAV-SQGRVQTNVLNIANEDCIKVAAVLNNAFYLENLHFTIEG--KDTHYFIKTTT 480
Query: 186 WRAADDKQQL----KRMQGKLNVTFHEVTE--SGRS--YADVKIHGRTSIVNLRYGTSAE 341
+ +L K ++ +NVT + T +GR+ +ADV++ +++RYG + +
Sbjct: 481 PESDLGTLRLTSGRKALENGINVTVSQSTTVVNGRTRRFADVEMQFGALALHVRYGMTLD 540
Query: 342 REKQRLLHHARATAIRKAWHREREALRNGFGGSIDWS 452
EK R+L AR A+ +AW RE++ +R+G G+ W+
Sbjct: 541 EEKARILEQARQRALARAWAREQQRVRDGEEGARLWT 577
>AK001748-1|BAA91879.1| 964|Homo sapiens protein ( Homo sapiens cDNA
FLJ10886 fis, clone NT2RP4001966. ).
Length = 964
Score = 62.1 bits (144), Expect = 9e-10
Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Frame = +3
Query: 6 RGILVSRNSRGRAVVTAVPSANAIYRDVYTSVFNRSHLLPFSFVVHGDQQDVFYFVKEDT 185
+G++++ S+GR + AN V + N +L F + G +D YF+K T
Sbjct: 763 KGVMLAV-SQGRVQTNVLNIANEDCIKVAAVLNNAFYLENLHFTIEG--KDTHYFIKTTT 819
Query: 186 WRAADDKQQL----KRMQGKLNVTFHEVTE--SGRS--YADVKIHGRTSIVNLRYGTSAE 341
+ +L K ++ +NVT + T +GR+ +ADV++ +++RYG + +
Sbjct: 820 PESDLGTLRLTSGRKALENGINVTVSQSTTVVNGRTRRFADVEMQFGALALHVRYGMTLD 879
Query: 342 REKQRLLHHARATAIRKAWHREREALRNGFGGSIDWS 452
EK R+L AR A+ +AW RE++ +R+G G+ W+
Sbjct: 880 EEKARILEQARQRALARAWAREQQRVRDGEEGARLWT 916
>AK001336-1|BAA91633.1| 1045|Homo sapiens protein ( Homo sapiens cDNA
FLJ10474 fis, clone NT2RP2000067. ).
Length = 1045
Score = 62.1 bits (144), Expect = 9e-10
Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Frame = +3
Query: 6 RGILVSRNSRGRAVVTAVPSANAIYRDVYTSVFNRSHLLPFSFVVHGDQQDVFYFVKEDT 185
+G++++ S+GR + AN V + N +L F + G +D YF+K T
Sbjct: 844 KGVMLAV-SQGRVQTNVLNIANEDCIKVAAVLNNAFYLENLHFTIEG--KDTHYFIKTTT 900
Query: 186 WRAADDKQQL----KRMQGKLNVTFHEVTE--SGRS--YADVKIHGRTSIVNLRYGTSAE 341
+ +L K ++ +NVT + T +GR+ +ADV++ +++RYG + +
Sbjct: 901 PESDLGTLRLTSGRKALENGINVTVSQSTTVVNGRTRRFADVEMQFGALALHVRYGMTLD 960
Query: 342 REKQRLLHHARATAIRKAWHREREALRNGFGGSIDWS 452
EK R+L AR A+ +AW RE++ +R+G G+ W+
Sbjct: 961 EEKARILEQARQRALARAWAREQQRVRDGEEGARLWT 997
>AB040888-1|BAA95979.2| 2450|Homo sapiens KIAA1455 protein protein.
Length = 2450
Score = 62.1 bits (144), Expect = 9e-10
Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Frame = +3
Query: 6 RGILVSRNSRGRAVVTAVPSANAIYRDVYTSVFNRSHLLPFSFVVHGDQQDVFYFVKEDT 185
+G++++ S+GR + AN V + N +L F + G +D YF+K T
Sbjct: 2249 KGVMLAV-SQGRVQTNVLNIANEDCIKVAAVLNNAFYLENLHFTIEG--KDTHYFIKTTT 2305
Query: 186 WRAADDKQQL----KRMQGKLNVTFHEVTE--SGRS--YADVKIHGRTSIVNLRYGTSAE 341
+ +L K ++ +NVT + T +GR+ +ADV++ +++RYG + +
Sbjct: 2306 PESDLGTLRLTSGRKALENGINVTVSQSTTVVNGRTRRFADVEMQFGALALHVRYGMTLD 2365
Query: 342 REKQRLLHHARATAIRKAWHREREALRNGFGGSIDWS 452
EK R+L AR A+ +AW RE++ +R+G G+ W+
Sbjct: 2366 EEKARILEQARQRALARAWAREQQRVRDGEEGARLWT 2402
>Z85995-1|CAI42721.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog
1(Drosophila) protein.
Length = 2725
Score = 58.0 bits (134), Expect = 1e-08
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Frame = +3
Query: 96 SVFNRSHLLP-FSFVVHGDQQDVFYFVK----EDTWRAADDKQQLKRMQGKLNVTFHEVT 260
++ N +H L F + G +D YF+K E+ + + ++ +NVT ++T
Sbjct: 2552 AILNNAHYLENLHFTIEG--RDTHYFIKLGSLEEDLVLIGNTGGRRILENGVNVTVSQMT 2609
Query: 261 E--SGRS--YADVKIHGRTSIVNLRYGTSAEREKQRLLHHARATAIRKAWHREREALRNG 428
+GR+ +AD+++ N+RYGT+ E EK +L AR A+ +AW +E+ L+ G
Sbjct: 2610 SVLNGRTRRFADIQLQHGALCFNIRYGTTVEEEKNHVLEIARQRAVAQAWTKEQRRLQEG 2669
Query: 429 FGGSIDWS 452
G W+
Sbjct: 2670 EEGIRAWT 2677
>Z83823-1|CAI42742.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog
1(Drosophila) protein.
Length = 2725
Score = 58.0 bits (134), Expect = 1e-08
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Frame = +3
Query: 96 SVFNRSHLLP-FSFVVHGDQQDVFYFVK----EDTWRAADDKQQLKRMQGKLNVTFHEVT 260
++ N +H L F + G +D YF+K E+ + + ++ +NVT ++T
Sbjct: 2552 AILNNAHYLENLHFTIEG--RDTHYFIKLGSLEEDLVLIGNTGGRRILENGVNVTVSQMT 2609
Query: 261 E--SGRS--YADVKIHGRTSIVNLRYGTSAEREKQRLLHHARATAIRKAWHREREALRNG 428
+GR+ +AD+++ N+RYGT+ E EK +L AR A+ +AW +E+ L+ G
Sbjct: 2610 SVLNGRTRRFADIQLQHGALCFNIRYGTTVEEEKNHVLEIARQRAVAQAWTKEQRRLQEG 2669
Query: 429 FGGSIDWS 452
G W+
Sbjct: 2670 EEGIRAWT 2677
>Z81008-1|CAI42710.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog
1(Drosophila) protein.
Length = 2725
Score = 58.0 bits (134), Expect = 1e-08
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Frame = +3
Query: 96 SVFNRSHLLP-FSFVVHGDQQDVFYFVK----EDTWRAADDKQQLKRMQGKLNVTFHEVT 260
++ N +H L F + G +D YF+K E+ + + ++ +NVT ++T
Sbjct: 2552 AILNNAHYLENLHFTIEG--RDTHYFIKLGSLEEDLVLIGNTGGRRILENGVNVTVSQMT 2609
Query: 261 E--SGRS--YADVKIHGRTSIVNLRYGTSAEREKQRLLHHARATAIRKAWHREREALRNG 428
+GR+ +AD+++ N+RYGT+ E EK +L AR A+ +AW +E+ L+ G
Sbjct: 2610 SVLNGRTRRFADIQLQHGALCFNIRYGTTVEEEKNHVLEIARQRAVAQAWTKEQRRLQEG 2669
Query: 429 FGGSIDWS 452
G W+
Sbjct: 2670 EEGIRAWT 2677
>AL031075-1|CAI43065.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog
1(Drosophila) protein.
Length = 2725
Score = 58.0 bits (134), Expect = 1e-08
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Frame = +3
Query: 96 SVFNRSHLLP-FSFVVHGDQQDVFYFVK----EDTWRAADDKQQLKRMQGKLNVTFHEVT 260
++ N +H L F + G +D YF+K E+ + + ++ +NVT ++T
Sbjct: 2552 AILNNAHYLENLHFTIEG--RDTHYFIKLGSLEEDLVLIGNTGGRRILENGVNVTVSQMT 2609
Query: 261 E--SGRS--YADVKIHGRTSIVNLRYGTSAEREKQRLLHHARATAIRKAWHREREALRNG 428
+GR+ +AD+++ N+RYGT+ E EK +L AR A+ +AW +E+ L+ G
Sbjct: 2610 SVLNGRTRRFADIQLQHGALCFNIRYGTTVEEEKNHVLEIARQRAVAQAWTKEQRRLQEG 2669
Query: 429 FGGSIDWS 452
G W+
Sbjct: 2670 EEGIRAWT 2677
>AL023878-1|CAI42975.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog
1(Drosophila) protein.
Length = 2725
Score = 58.0 bits (134), Expect = 1e-08
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Frame = +3
Query: 96 SVFNRSHLLP-FSFVVHGDQQDVFYFVK----EDTWRAADDKQQLKRMQGKLNVTFHEVT 260
++ N +H L F + G +D YF+K E+ + + ++ +NVT ++T
Sbjct: 2552 AILNNAHYLENLHFTIEG--RDTHYFIKLGSLEEDLVLIGNTGGRRILENGVNVTVSQMT 2609
Query: 261 E--SGRS--YADVKIHGRTSIVNLRYGTSAEREKQRLLHHARATAIRKAWHREREALRNG 428
+GR+ +AD+++ N+RYGT+ E EK +L AR A+ +AW +E+ L+ G
Sbjct: 2610 SVLNGRTRRFADIQLQHGALCFNIRYGTTVEEEKNHVLEIARQRAVAQAWTKEQRRLQEG 2669
Query: 429 FGGSIDWS 452
G W+
Sbjct: 2670 EEGIRAWT 2677
>AL022718-3|CAI42154.1| 2725|Homo sapiens odz, odd Oz/ten-m homolog
1(Drosophila) protein.
Length = 2725
Score = 58.0 bits (134), Expect = 1e-08
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Frame = +3
Query: 96 SVFNRSHLLP-FSFVVHGDQQDVFYFVK----EDTWRAADDKQQLKRMQGKLNVTFHEVT 260
++ N +H L F + G +D YF+K E+ + + ++ +NVT ++T
Sbjct: 2552 AILNNAHYLENLHFTIEG--RDTHYFIKLGSLEEDLVLIGNTGGRRILENGVNVTVSQMT 2609
Query: 261 E--SGRS--YADVKIHGRTSIVNLRYGTSAEREKQRLLHHARATAIRKAWHREREALRNG 428
+GR+ +AD+++ N+RYGT+ E EK +L AR A+ +AW +E+ L+ G
Sbjct: 2610 SVLNGRTRRFADIQLQHGALCFNIRYGTTVEEEKNHVLEIARQRAVAQAWTKEQRRLQEG 2669
Query: 429 FGGSIDWS 452
G W+
Sbjct: 2670 EEGIRAWT 2677
>AF100772-1|AAF04723.1| 2725|Homo sapiens tenascin-M1 protein.
Length = 2725
Score = 58.0 bits (134), Expect = 1e-08
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Frame = +3
Query: 96 SVFNRSHLLP-FSFVVHGDQQDVFYFVK----EDTWRAADDKQQLKRMQGKLNVTFHEVT 260
++ N +H L F + G +D YF+K E+ + + ++ +NVT ++T
Sbjct: 2552 AILNNAHYLENLHFTIEG--RDTHYFIKLGSLEEDLVLIGNTGGRRILENGVNVTVSQMT 2609
Query: 261 E--SGRS--YADVKIHGRTSIVNLRYGTSAEREKQRLLHHARATAIRKAWHREREALRNG 428
+GR+ +AD+++ N+RYGT+ E EK +L AR A+ +AW +E+ L+ G
Sbjct: 2610 SLLNGRTRRFADIQLQHGALCFNIRYGTTVEEEKNHVLEIARQRAVAQAWTKEQRRLQEG 2669
Query: 429 FGGSIDWS 452
G W+
Sbjct: 2670 EEGIRAWT 2677
>AL080120-1|CAB45719.1| 184|Homo sapiens hypothetical protein
protein.
Length = 184
Score = 57.2 bits (132), Expect = 3e-08
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Frame = +3
Query: 216 KRMQGKLNVTFHEVTE--SGRS--YADVKIHGRTSIVNLRYGTSAEREKQRLLHHARATA 383
+ ++ +NVT ++ +GR+ Y D+++ +N RYGT+ + EK R+L AR A
Sbjct: 54 RTLENGVNVTVSQINTVLNGRTRRYTDIQLQYGALCLNTRYGTTLDEEKARVLELARQRA 113
Query: 384 IRKAWHREREALRNGFGGSIDWS 452
+R+AW RE++ LR G G W+
Sbjct: 114 VRQAWAREQQRLREGEEGLRAWT 136
>AB032953-1|BAA86441.2| 2144|Homo sapiens KIAA1127 protein protein.
Length = 2144
Score = 44.4 bits (100), Expect = 2e-04
Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 14/150 (9%)
Frame = +3
Query: 45 VVTAVPS-ANAIYRDVYTSVFNRSHLLPFSFVVHGDQQDVFYFVKEDTWRAADDKQQL-- 215
V T V S A+ R V + + N +L + + G +D YFVK + A D L
Sbjct: 1951 VTTGVSSIASEDSRKVASVLNNAYYLDKMHYSIEG--KDTHYFVKIGS--ADGDLVTLGT 2006
Query: 216 ----KRMQGKLNVTFHEVT--ESGRS--YADVKIHGRTSIVNLRYGTSAE---REKQRLL 362
K ++ +NVT + T +GR+ + +++ T ++++RYG + + EK R+L
Sbjct: 2007 TIGRKVLESGVNVTVSQPTLLVNGRTRRFTNIEFQYSTLLLSIRYGLTPDTLDEEKARVL 2066
Query: 363 HHARATAIRKAWHREREALRNGFGGSIDWS 452
AR A+ AW +E++ R+G GS W+
Sbjct: 2067 DQARQRALGTAWAKEQQKARDGREGSRLWT 2096
>BC043277-1|AAH43277.1| 839|Homo sapiens SYNJ2 protein protein.
Length = 839
Score = 34.3 bits (75), Expect = 0.20
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 126 FSFVVHGDQQDVFYFVKEDTWR--AADDKQQLKRMQGKLNVTFHE 254
F++ + ++VFYFVK W+ D+ QL++ GK+ FHE
Sbjct: 70 FNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSGKIFKDFHE 114
>AY152396-1|AAN73051.1| 1288|Homo sapiens synaptojanin 2A protein.
Length = 1288
Score = 34.3 bits (75), Expect = 0.20
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 126 FSFVVHGDQQDVFYFVKEDTWR--AADDKQQLKRMQGKLNVTFHE 254
F++ + ++VFYFVK W+ D+ QL++ GK+ FHE
Sbjct: 727 FNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSGKIFKDFHE 771
>AL139330-4|CAI12983.1| 1496|Homo sapiens synaptojanin 2 protein.
Length = 1496
Score = 34.3 bits (75), Expect = 0.20
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 126 FSFVVHGDQQDVFYFVKEDTWR--AADDKQQLKRMQGKLNVTFHE 254
F++ + ++VFYFVK W+ D+ QL++ GK+ FHE
Sbjct: 727 FNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSGKIFKDFHE 771
>AF318616-1|AAG46036.1| 1496|Homo sapiens synaptojanin 2 protein.
Length = 1496
Score = 34.3 bits (75), Expect = 0.20
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 126 FSFVVHGDQQDVFYFVKEDTWR--AADDKQQLKRMQGKLNVTFHE 254
F++ + ++VFYFVK W+ D+ QL++ GK+ FHE
Sbjct: 727 FNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSGKIFKDFHE 771
>AF039945-1|AAD02178.1| 1443|Homo sapiens synaptojanin 2B protein.
Length = 1443
Score = 34.3 bits (75), Expect = 0.20
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 126 FSFVVHGDQQDVFYFVKEDTWR--AADDKQQLKRMQGKLNVTFHE 254
F++ + ++VFYFVK W+ D+ QL++ GK+ FHE
Sbjct: 674 FNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSGKIFKDFHE 718
>AB002346-1|BAA20805.2| 1443|Homo sapiens KIAA0348 protein protein.
Length = 1443
Score = 34.3 bits (75), Expect = 0.20
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 126 FSFVVHGDQQDVFYFVKEDTWR--AADDKQQLKRMQGKLNVTFHE 254
F++ + ++VFYFVK W+ D+ QL++ GK+ FHE
Sbjct: 674 FNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSGKIFKDFHE 718
>AM279490-1|CAK50609.1| 117|Homo sapiens immunoglobulin A heavy
chain variable region protein.
Length = 117
Score = 33.1 bits (72), Expect = 0.47
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Frame = +3
Query: 12 ILVSRNSRGRAVVTAVPSANAIYRDVY------TSVFNRSHLLPF-SFVVHGDQQDVFYF 170
++ S +GRA +TA S N +Y ++ T+VF + +LP+ S V +D +YF
Sbjct: 43 VIYSERVQGRATITADASTNTVYMEIRNLRSDDTAVFYCAGMLPYCSRSVCSSLKD-YYF 101
Query: 171 VKEDTW 188
+ D W
Sbjct: 102 FRMDVW 107
>EF088216-1|ABK41888.1| 687|Homo sapiens polyA specific
ribonuclease subunit homolog protein.
Length = 687
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 168 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 287
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 596 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 632
>BC128180-1|AAI28181.1| 687|Homo sapiens PAN3 polyA specific
ribonuclease subunit homolog (S. cerevisiae) protein.
Length = 687
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 168 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 287
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 596 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 632
>BC128179-1|AAI28180.1| 553|Homo sapiens PAN3 protein protein.
Length = 553
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 168 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 287
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 462 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 498
>BC113426-1|AAI13427.1| 617|Homo sapiens zinc finger protein 221
protein.
Length = 617
Score = 30.7 bits (66), Expect = 2.5
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 60 PSANAIYRDVYTSVFNRSHLLPFSFVVHGDQQDVFYFV-KEDTWRAADDKQQLKRMQGKL 236
P+ +YRDV F R+ L + H QD F+F+ KE W+ Q+ GK+
Sbjct: 49 PAQRKLYRDVMLENF-RNLLSVGNQPFH---QDTFHFLGKEKFWKMKTTSQREGNSGGKI 104
Query: 237 NVTFHEVTESG 269
+ V E+G
Sbjct: 105 QIEMETVPEAG 115
>BC111981-1|AAI11982.1| 617|Homo sapiens zinc finger protein 221
protein.
Length = 617
Score = 30.7 bits (66), Expect = 2.5
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 60 PSANAIYRDVYTSVFNRSHLLPFSFVVHGDQQDVFYFV-KEDTWRAADDKQQLKRMQGKL 236
P+ +YRDV F R+ L + H QD F+F+ KE W+ Q+ GK+
Sbjct: 49 PAQRKLYRDVMLENF-RNLLSVGNQPFH---QDTFHFLGKEKFWKMKTTSQREGNSGGKI 104
Query: 237 NVTFHEVTESG 269
+ V E+G
Sbjct: 105 QIEMETVPEAG 115
>BC024318-1|AAH24318.1| 442|Homo sapiens PAN3 protein protein.
Length = 442
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 168 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 287
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 351 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 387
>AL356915-4|CAI12450.2| 741|Homo sapiens PAN3 polyA specific
ribonuclease subunit homolog (S. cerevisiae) protein.
Length = 741
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 168 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 287
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 650 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 686
>AL356915-3|CAI12449.2| 687|Homo sapiens PAN3 polyA specific
ribonuclease subunit homolog (S. cerevisiae) protein.
Length = 687
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 168 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 287
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 596 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 632
>AL138712-3|CAM20921.1| 741|Homo sapiens PAN3 polyA specific
ribonuclease subunit homolog (S. cerevisiae) protein.
Length = 741
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 168 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 287
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 650 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 686
>AL138712-2|CAI14848.1| 687|Homo sapiens PAN3 polyA specific
ribonuclease subunit homolog (S. cerevisiae) protein.
Length = 687
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 168 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 287
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 596 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 632
>AK131556-1|BAD18690.1| 472|Homo sapiens protein ( Homo sapiens
cDNA FLJ16798 fis, clone TESTI2053667, weakly similar
to PAB-dependent poly(A)-specific ribonuclease subunit
PAN3 (EC 3.1.13.4). ).
Length = 472
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 168 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 287
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 381 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 417
>AK091307-1|BAC03632.1| 126|Homo sapiens protein ( Homo sapiens
cDNA FLJ33988 fis, clone DFNES2006346, weakly similar to
PAB-DEPENDENT POLY(A)-SPECIFIC RIBONUCLEASE SUBUNIT PAN3
(EC ).
Length = 126
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 168 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 287
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 35 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 71
>AF187987-1|AAF04103.1| 617|Homo sapiens zinc finger protein ZNF221
protein.
Length = 617
Score = 30.7 bits (66), Expect = 2.5
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 60 PSANAIYRDVYTSVFNRSHLLPFSFVVHGDQQDVFYFV-KEDTWRAADDKQQLKRMQGKL 236
P+ +YRDV F R+ L + H QD F+F+ KE W+ Q+ GK+
Sbjct: 49 PAQRKLYRDVMLENF-RNLLSVGNQPFH---QDTFHFLGKEKFWKMKTTSQREGNSGGKI 104
Query: 237 NVTFHEVTESG 269
+ V E+G
Sbjct: 105 QIEMETVPEAG 115
>AC035150-2|AAF63029.1| 617|Homo sapiens Zinc finger protein ZNF221
protein.
Length = 617
Score = 30.7 bits (66), Expect = 2.5
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 60 PSANAIYRDVYTSVFNRSHLLPFSFVVHGDQQDVFYFV-KEDTWRAADDKQQLKRMQGKL 236
P+ +YRDV F R+ L + H QD F+F+ KE W+ Q+ GK+
Sbjct: 49 PAQRKLYRDVMLENF-RNLLSVGNQPFH---QDTFHFLGKEKFWKMKTTSQREGNSGGKI 104
Query: 237 NVTFHEVTESG 269
+ V E+G
Sbjct: 105 QIEMETVPEAG 115
>AB109552-1|BAD93184.1| 741|Homo sapiens PABP1-DEPENDENT
POLY(A)-SPECIFIC RIBONUCLEASE SUBUNIT PAN3b protein.
Length = 741
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 168 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 287
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 650 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 686
>AB107584-1|BAD02262.1| 687|Homo sapiens PABP1-DEPENDENT
POLY(A)-SPECIFIC RIBONUCLEASE SUBUNIT PAN3 protein.
Length = 687
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 168 FVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADV 287
F K+ TW D+ LK + L FH+VTE+G + D+
Sbjct: 596 FQKDPTWSETGDRYLLKLFRDHL---FHQVTEAGAPWIDL 632
>Y00057-1|CAA68266.1| 761|Homo sapiens protein ( Human mRNA for
beta-subunit of cell surface adhesion glycoproteins
LFA-1, CR3 and p150,95. ).
Length = 761
Score = 29.9 bits (64), Expect = 4.4
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 165 YFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGR 272
Y++ + ++ DD + +K++ G L +E+TESGR
Sbjct: 122 YYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGR 157
>X64072-1|CAA45427.1| 769|Homo sapiens integrin beta-2 subunit
protein.
Length = 769
Score = 29.9 bits (64), Expect = 4.4
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 165 YFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGR 272
Y++ + ++ DD + +K++ G L +E+TESGR
Sbjct: 130 YYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGR 165
>M15395-1|AAA59490.1| 769|Homo sapiens LYAM1 protein.
Length = 769
Score = 29.9 bits (64), Expect = 4.4
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 165 YFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGR 272
Y++ + ++ DD + +K++ G L +E+TESGR
Sbjct: 130 YYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGR 165
>BC021077-1|AAH21077.1| 758|Homo sapiens ITGB2 protein protein.
Length = 758
Score = 29.9 bits (64), Expect = 4.4
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 165 YFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGR 272
Y++ + ++ DD + +K++ G L +E+TESGR
Sbjct: 119 YYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGR 154
>BC005861-1|AAH05861.1| 769|Homo sapiens ITGB2 protein protein.
Length = 769
Score = 29.9 bits (64), Expect = 4.4
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 165 YFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGR 272
Y++ + ++ DD + +K++ G L +E+TESGR
Sbjct: 130 YYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGR 165
>AL163300-3|CAB90553.1| 769|Homo sapiens cell surface adhesion
glycoprotein (LFA-1/CR3/P150,959 beta subunit precursor)
protein.
Length = 769
Score = 29.9 bits (64), Expect = 4.4
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 165 YFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGR 272
Y++ + ++ DD + +K++ G L +E+TESGR
Sbjct: 130 YYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGR 165
>AK222505-1|BAD96225.1| 769|Homo sapiens integrin beta chain, beta
2 precursor variant protein.
Length = 769
Score = 29.9 bits (64), Expect = 4.4
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 165 YFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGR 272
Y++ + ++ DD + +K++ G L +E+TESGR
Sbjct: 130 YYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGR 165
>AF016894-1|AAL14027.1| 56|Homo sapiens integrin beta 2 protein.
Length = 56
Score = 29.9 bits (64), Expect = 4.4
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 165 YFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGR 272
Y++ + ++ DD + +K++ G L +E+TESGR
Sbjct: 20 YYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGR 55
>AB208909-1|BAD92146.1| 475|Homo sapiens integrin beta chain, beta
2 precursor variant protein.
Length = 475
Score = 29.9 bits (64), Expect = 4.4
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 165 YFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGR 272
Y++ + ++ DD + +K++ G L +E+TESGR
Sbjct: 175 YYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGR 210
>BX640905-1|CAE45950.1| 1706|Homo sapiens hypothetical protein
protein.
Length = 1706
Score = 29.1 bits (62), Expect = 7.7
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +3
Query: 126 FSFVVHGDQQDVFYFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADVKI 293
FS++ Q+DVFY ++D W ++ K + + H V+ RS D++I
Sbjct: 998 FSYIAKNSQEDVFY--EDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQI 1051
>AY137776-1|AAN11306.1| 1706|Homo sapiens DNA strand-exchange protein
SEP1 protein.
Length = 1706
Score = 29.1 bits (62), Expect = 7.7
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +3
Query: 126 FSFVVHGDQQDVFYFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADVKI 293
FS++ Q+DVFY ++D W ++ K + + H V+ RS D++I
Sbjct: 998 FSYIAKNSQEDVFY--EDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQI 1051
>AL133623-1|CAB63749.1| 1159|Homo sapiens hypothetical protein
protein.
Length = 1159
Score = 29.1 bits (62), Expect = 7.7
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +3
Query: 126 FSFVVHGDQQDVFYFVKEDTWRAADDKQQLKRMQGKLNVTFHEVTESGRSYADVKI 293
FS++ Q+DVFY ++D W ++ K + + H V+ RS D++I
Sbjct: 463 FSYIAKNSQEDVFY--EDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQI 516
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,647,633
Number of Sequences: 237096
Number of extensions: 1299139
Number of successful extensions: 6999
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 6803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6992
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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