Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_D23
         (418 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y14314-1|CAA74694.1|  757|Homo sapiens IgE autoantigen protein.       120   1e-27
BT006637-1|AAP35283.1|  800|Homo sapiens squamous cell carcinoma...   120   1e-27
BC001058-1|AAH01058.1|  800|Homo sapiens squamous cell carcinoma...   120   1e-27
AF353625-1|AAK49523.1|  800|Homo sapiens U4/U6.U5 tri-snRNP-asso...   120   1e-27
AB006198-1|BAA24056.1|  800|Homo sapiens SART-1 protein.              120   1e-27
AK223016-1|BAD96736.1|  800|Homo sapiens squamous cell carcinoma...   118   6e-27
AF109680-1|AAD20223.1|   94|Homo sapiens IgE autoantigen protein.      42   6e-04
L13738-1|AAA53570.2| 1036|Homo sapiens activated p21cdc42Hs kina...    30   2.7  
AK131539-1|BAD18675.1| 1086|Homo sapiens protein ( Homo sapiens ...    29   8.2  

>Y14314-1|CAA74694.1|  757|Homo sapiens IgE autoantigen protein.
          Length = 757

 Score =  120 bits (290), Expect = 1e-27
 Identities = 54/87 (62%), Positives = 70/87 (80%)
 Frame = +3

Query: 9   IKLEYVDDEGRPLPPKEAFRYLSHKFHGKGPGKNKQEKRIKKAVQEGLMKKMSSTDTPLG 188
           +K+EYVD+ GR L PKEAFR LSH+FHGKG GK K E+R+KK  +E L+KKMSS+DTPLG
Sbjct: 665 VKIEYVDETGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLG 724

Query: 189 TLQMLQEKQRETHSPFIVLSGAKREPN 269
           T+ +LQEKQ+   +P+IVLSG+ +  N
Sbjct: 725 TVALLQEKQKAQKTPYIVLSGSGKSMN 751


>BT006637-1|AAP35283.1|  800|Homo sapiens squamous cell carcinoma
           antigen recognised by T cells protein.
          Length = 800

 Score =  120 bits (290), Expect = 1e-27
 Identities = 54/87 (62%), Positives = 70/87 (80%)
 Frame = +3

Query: 9   IKLEYVDDEGRPLPPKEAFRYLSHKFHGKGPGKNKQEKRIKKAVQEGLMKKMSSTDTPLG 188
           +K+EYVD+ GR L PKEAFR LSH+FHGKG GK K E+R+KK  +E L+KKMSS+DTPLG
Sbjct: 708 VKIEYVDETGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLG 767

Query: 189 TLQMLQEKQRETHSPFIVLSGAKREPN 269
           T+ +LQEKQ+   +P+IVLSG+ +  N
Sbjct: 768 TVALLQEKQKAQKTPYIVLSGSGKSMN 794


>BC001058-1|AAH01058.1|  800|Homo sapiens squamous cell carcinoma
           antigen recognized by T cells protein.
          Length = 800

 Score =  120 bits (290), Expect = 1e-27
 Identities = 54/87 (62%), Positives = 70/87 (80%)
 Frame = +3

Query: 9   IKLEYVDDEGRPLPPKEAFRYLSHKFHGKGPGKNKQEKRIKKAVQEGLMKKMSSTDTPLG 188
           +K+EYVD+ GR L PKEAFR LSH+FHGKG GK K E+R+KK  +E L+KKMSS+DTPLG
Sbjct: 708 VKIEYVDETGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLG 767

Query: 189 TLQMLQEKQRETHSPFIVLSGAKREPN 269
           T+ +LQEKQ+   +P+IVLSG+ +  N
Sbjct: 768 TVALLQEKQKAQKTPYIVLSGSGKSMN 794


>AF353625-1|AAK49523.1|  800|Homo sapiens U4/U6.U5
           tri-snRNP-associated 110 kDa protein protein.
          Length = 800

 Score =  120 bits (290), Expect = 1e-27
 Identities = 54/87 (62%), Positives = 70/87 (80%)
 Frame = +3

Query: 9   IKLEYVDDEGRPLPPKEAFRYLSHKFHGKGPGKNKQEKRIKKAVQEGLMKKMSSTDTPLG 188
           +K+EYVD+ GR L PKEAFR LSH+FHGKG GK K E+R+KK  +E L+KKMSS+DTPLG
Sbjct: 708 VKIEYVDETGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLG 767

Query: 189 TLQMLQEKQRETHSPFIVLSGAKREPN 269
           T+ +LQEKQ+   +P+IVLSG+ +  N
Sbjct: 768 TVALLQEKQKAQKTPYIVLSGSGKSMN 794


>AB006198-1|BAA24056.1|  800|Homo sapiens SART-1 protein.
          Length = 800

 Score =  120 bits (290), Expect = 1e-27
 Identities = 54/87 (62%), Positives = 70/87 (80%)
 Frame = +3

Query: 9   IKLEYVDDEGRPLPPKEAFRYLSHKFHGKGPGKNKQEKRIKKAVQEGLMKKMSSTDTPLG 188
           +K+EYVD+ GR L PKEAFR LSH+FHGKG GK K E+R+KK  +E L+KKMSS+DTPLG
Sbjct: 708 VKIEYVDETGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLG 767

Query: 189 TLQMLQEKQRETHSPFIVLSGAKREPN 269
           T+ +LQEKQ+   +P+IVLSG+ +  N
Sbjct: 768 TVALLQEKQKAQKTPYIVLSGSGKSMN 794


>AK223016-1|BAD96736.1|  800|Homo sapiens squamous cell carcinoma
           antigen recognized by T cells 1 variant protein.
          Length = 800

 Score =  118 bits (285), Expect = 6e-27
 Identities = 53/87 (60%), Positives = 70/87 (80%)
 Frame = +3

Query: 9   IKLEYVDDEGRPLPPKEAFRYLSHKFHGKGPGKNKQEKRIKKAVQEGLMKKMSSTDTPLG 188
           +K+E+VD+ GR L PKEAFR LSH+FHGKG GK K E+R+KK  +E L+KKMSS+DTPLG
Sbjct: 708 VKIEHVDETGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLG 767

Query: 189 TLQMLQEKQRETHSPFIVLSGAKREPN 269
           T+ +LQEKQ+   +P+IVLSG+ +  N
Sbjct: 768 TVALLQEKQKAQKTPYIVLSGSGKSMN 794


>AF109680-1|AAD20223.1|   94|Homo sapiens IgE autoantigen protein.
          Length = 94

 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +3

Query: 9   IKLEYVDDEGRPLPPKEAFRYLSHK 83
           +K+EYVD+ GR L PKEAFR LSH+
Sbjct: 70  VKIEYVDETGRKLTPKEAFRQLSHR 94


>L13738-1|AAA53570.2| 1036|Homo sapiens activated p21cdc42Hs kinase
           protein.
          Length = 1036

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 16/54 (29%), Positives = 30/54 (55%)
 Frame = +3

Query: 21  YVDDEGRPLPPKEAFRYLSHKFHGKGPGKNKQEKRIKKAVQEGLMKKMSSTDTP 182
           +V ++ RP PP E   +L  +  GK P  + Q   I +A+Q+  M+++ +  +P
Sbjct: 672 FVPEQARPPPPLEDNLFLPPQGGGK-PPSSAQTAEIFQALQQECMRQLQAPGSP 724


>AK131539-1|BAD18675.1| 1086|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16772 fis, clone BRAWH3043827, highly  similar
           to Homo sapiens activated p21cdc42Hs kinase (ACK1). ).
          Length = 1086

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = +3

Query: 21  YVDDEGRPLPPKEAFRYLSHKFHGKGPGKNKQEKRIKKAVQEGLMKKMSSTDTPLGTL 194
           +V ++ RP PP E   +L  +  GK P  + Q   I +A+Q+  M+++ +   P G+L
Sbjct: 750 FVPEQARPPPPLEDNLFLPPQGGGK-PPSSAQTAEIFQALQQECMRQLQA---PAGSL 803


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,641,833
Number of Sequences: 237096
Number of extensions: 946129
Number of successful extensions: 2454
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2454
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)