Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_D22
(529 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024835-2|AAK68537.1| 684|Caenorhabditis elegans Hypothetical ... 80 1e-15
U64849-2|AAC48051.1| 411|Caenorhabditis elegans Hypothetical pr... 76 1e-14
Z79696-2|CAB01973.1| 405|Caenorhabditis elegans Hypothetical pr... 70 9e-13
Z81055-8|CAB02896.2| 409|Caenorhabditis elegans Hypothetical pr... 64 4e-11
AF067942-2|AAG45574.1| 403|Caenorhabditis elegans Hypothetical ... 62 2e-10
AF022976-9|AAC69088.2| 404|Caenorhabditis elegans Hypothetical ... 62 2e-10
Z70780-7|CAA94824.1| 411|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AL117200-4|CAB60584.1| 401|Caenorhabditis elegans Hypothetical ... 50 8e-07
AF067942-3|AAL11486.1| 351|Caenorhabditis elegans Hypothetical ... 43 2e-04
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 28 3.6
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 28 3.6
U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein. 28 4.8
AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeri... 28 4.8
AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying de... 28 4.8
AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying de... 28 4.8
Z81118-3|CAB03325.1| 346|Caenorhabditis elegans Hypothetical pr... 27 8.3
>AC024835-2|AAK68537.1| 684|Caenorhabditis elegans Hypothetical
protein Y57E12B.3 protein.
Length = 684
Score = 79.8 bits (188), Expect = 1e-15
Identities = 33/86 (38%), Positives = 50/86 (58%)
Frame = -2
Query: 258 NYTNIPNIAQHAPAGSSINQLLHYFQLVNSGEFHKFDYRKQKNIKIYGTPVPPSYSLEHV 79
N + I H PAG+S +LH+ Q+V +FD+ K N+KIYG P PP Y + +
Sbjct: 518 NNSRIGIYLAHNPAGTSSRNILHFAQMVKKKRMSRFDHGKDLNLKIYGAPSPPEYDIRKI 577
Query: 78 SAPVFIFYSDNDWLISAIDANVTLVP 1
++ +++FYSD DWL + D L+P
Sbjct: 578 NSSIYLFYSDFDWLANPKDVEGFLIP 603
>U64849-2|AAC48051.1| 411|Caenorhabditis elegans Hypothetical
protein K04A8.5 protein.
Length = 411
Score = 76.2 bits (179), Expect = 1e-14
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Frame = -2
Query: 285 FIGYDFLGQNYTNIPNIAQHAPAGSSINQLLHYFQLVNSGEFHKFDYRKQKNIKIYGTPV 106
FIG N T IP H PAGSS N + H Q+ + G FD ++KN+K YG +
Sbjct: 271 FIGTANENWNQTRIPVYLAHTPAGSSSNVMAHLDQMFSYGGVPTFDMGEEKNLKAYGQKL 330
Query: 105 PPSYSLEHVS-APVFIFYSDNDWLISAIDANVTL 7
PP Y+ ++ P+++F+SD+DWL + D TL
Sbjct: 331 PPQYNFTGIADVPIYLFWSDDDWLSTKQDLEETL 364
>Z79696-2|CAB01973.1| 405|Caenorhabditis elegans Hypothetical
protein F54F3.3 protein.
Length = 405
Score = 70.1 bits (164), Expect = 9e-13
Identities = 29/79 (36%), Positives = 45/79 (56%)
Frame = -2
Query: 258 NYTNIPNIAQHAPAGSSINQLLHYFQLVNSGEFHKFDYRKQKNIKIYGTPVPPSYSLEHV 79
N T +P H PAG+S ++H+ Q+V G K+DY ++ N K YG P+Y V
Sbjct: 273 NATRVPIYVAHTPAGTSTQNIVHWIQMVRHGGTPKYDYGEKGNKKHYGQANVPAYDFTTV 332
Query: 78 SAPVFIFYSDNDWLISAID 22
+ PV++++ D+DWL D
Sbjct: 333 NRPVYLYWGDSDWLADPTD 351
>Z81055-8|CAB02896.2| 409|Caenorhabditis elegans Hypothetical
protein F01G10.7 protein.
Length = 409
Score = 64.5 bits (150), Expect = 4e-11
Identities = 28/69 (40%), Positives = 38/69 (55%)
Frame = -2
Query: 228 HAPAGSSINQLLHYFQLVNSGEFHKFDYRKQKNIKIYGTPVPPSYSLEHVSAPVFIFYSD 49
H PA +S+ L H+ QLV S KFDY NI YG P PP Y L ++ P ++++S
Sbjct: 277 HTPAATSVKDLQHWIQLVKSQTVSKFDYGTDGNIIEYGQPTPPEYDLTQINTPTYLYWSR 336
Query: 48 NDWLISAID 22
+D L D
Sbjct: 337 DDILADTQD 345
>AF067942-2|AAG45574.1| 403|Caenorhabditis elegans Hypothetical
protein ZK6.7a protein.
Length = 403
Score = 62.1 bits (144), Expect = 2e-10
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = -2
Query: 258 NYTNIPNIAQHAPAGSSINQLLHYFQLVNSGEFHKFDYRKQKNIKIYGTPVPPSYSLEHV 79
N T +P A H PAG+S ++H+ Q+V+ G +D+ + N K YG PP Y +
Sbjct: 271 NQTRVPVYATHDPAGTSTQNIVHWMQMVHHGGVPAYDWGTKTNKKKYGQANPPEYDFTAI 330
Query: 78 -SAPVFIFYSDNDWLISAID 22
+++++SD DWL D
Sbjct: 331 KGTKIYLYWSDADWLADTPD 350
>AF022976-9|AAC69088.2| 404|Caenorhabditis elegans Hypothetical
protein R11G11.14 protein.
Length = 404
Score = 62.1 bits (144), Expect = 2e-10
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = -2
Query: 258 NYTNIPNIAQHAPAGSSINQLLHYFQLVNSGEFHKFDYRKQKNIKIYGTPVPPSYSLEHV 79
N T +P A H PAG++ ++H+ Q+V G +D+ ++N K YG PP Y +
Sbjct: 272 NSTRVPVYASHDPAGTATQNIVHWIQMVRHGGVPAYDWGSKENKKKYGQANPPEYDFTAI 331
Query: 78 -SAPVFIFYSDNDWLISAID 22
+++++SD DWL D
Sbjct: 332 KGTQIYLYWSDADWLADKTD 351
>Z70780-7|CAA94824.1| 411|Caenorhabditis elegans Hypothetical
protein F46B6.8 protein.
Length = 411
Score = 55.6 bits (128), Expect = 2e-08
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = -2
Query: 222 PAGSSINQLLHYFQLVNSGEFHKFDYRKQKNIKIYGTPVPPSYSLEHV-SAPVFIFYSDN 46
PAG+S ++H+ Q+V +G FD+ K+ N K YG PP Y + + +++SD+
Sbjct: 290 PAGTSTQNIVHWMQMVRNGRVPAFDWGKKINKKKYGQDTPPEYDFGAIKGTKIHLYWSDD 349
Query: 45 DWL 37
DWL
Sbjct: 350 DWL 352
>AL117200-4|CAB60584.1| 401|Caenorhabditis elegans Hypothetical
protein Y50E8A.7 protein.
Length = 401
Score = 50.4 bits (115), Expect = 8e-07
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = -2
Query: 279 GYDFLGQ-NYTNIPNIAQHAPAGSSINQLLHYFQLVNSGEFHKFDYRKQKNIKIYGTPVP 103
G + LGQ N + IP I H P+ +S LLH+ Q+ E + D +N+ YG
Sbjct: 261 GIETLGQVNDSRIPIILSHFPSATSTLNLLHWMQIFKYHELRRLDLGTARNLIAYGQKDA 320
Query: 102 PSYSLEHVSAPVFIFYSDNDWLISAID 22
P + ++ A +++S +D + +D
Sbjct: 321 PRLEIGNIIAQTILYFSKDDQITDEVD 347
>AF067942-3|AAL11486.1| 351|Caenorhabditis elegans Hypothetical
protein ZK6.7b protein.
Length = 351
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 258 NYTNIPNIAQHAPAGSSINQLLHYFQLVNSGEFHKFDYRKQKNIKIYG 115
N T +P A H PAG+S ++H+ Q+V+ G +D+ + N K YG
Sbjct: 271 NQTRVPVYATHDPAGTSTQNIVHWMQMVHHGGVPAYDWGTKTNKKKYG 318
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 28.3 bits (60), Expect = 3.6
Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Frame = +1
Query: 82 MFQRIRRRNWSTVNFYVFLFTIIKFMKFSGIY*LKIMQQLINR*PCRCVLSNVWYVSVIL 261
++Q I W TV F L+ F +G + L + P R L + ++ L
Sbjct: 66 LYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTPMRIFLMIL--NNIAL 123
Query: 262 SKEVI--ANKRKCQVKWCGNDNRKHNFEKDNFY 354
+VI A +C KW D HN + F+
Sbjct: 124 QNDVIEWARDHRCHHKWTDTDADPHNTTRGFFF 156
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 28.3 bits (60), Expect = 3.6
Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Frame = +1
Query: 82 MFQRIRRRNWSTVNFYVFLFTIIKFMKFSGIY*LKIMQQLINR*PCRCVLSNVWYVSVIL 261
++Q I W TV F L+ F +G + L + P R L + ++ L
Sbjct: 66 LYQLIFEAKWQTVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTPMRIFLMIL--NNIAL 123
Query: 262 SKEVI--ANKRKCQVKWCGNDNRKHNFEKDNFY 354
+VI A +C KW D HN + F+
Sbjct: 124 QNDVIEWARDHRCHHKWTDTDADPHNTTRGFFF 156
>U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein.
Length = 355
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -2
Query: 522 PHVWLLKELLKDSGVGFQSTFGSLAVIPLSPVARFFLSCLRAIQI 388
P+V +KEL +DSG+ Q + L+ A+++LS LR + +
Sbjct: 123 PYVSYIKELWEDSGI--QECYDRRREYQLTDSAKYYLSDLRRLAV 165
>AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 355
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -2
Query: 522 PHVWLLKELLKDSGVGFQSTFGSLAVIPLSPVARFFLSCLRAIQI 388
P+V +KEL +DSG+ Q + L+ A+++LS LR + +
Sbjct: 123 PYVSYIKELWEDSGI--QECYDRRREYQLTDSAKYYLSDLRRLAV 165
>AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying
defective protein 30,isoform b protein.
Length = 303
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -2
Query: 522 PHVWLLKELLKDSGVGFQSTFGSLAVIPLSPVARFFLSCLRAIQI 388
P+V +KEL +DSG+ Q + L+ A+++LS LR + +
Sbjct: 71 PYVSYIKELWEDSGI--QECYDRRREYQLTDSAKYYLSDLRRLAV 113
>AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying
defective protein 30,isoform a protein.
Length = 355
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -2
Query: 522 PHVWLLKELLKDSGVGFQSTFGSLAVIPLSPVARFFLSCLRAIQI 388
P+V +KEL +DSG+ Q + L+ A+++LS LR + +
Sbjct: 123 PYVSYIKELWEDSGI--QECYDRRREYQLTDSAKYYLSDLRRLAV 165
>Z81118-3|CAB03325.1| 346|Caenorhabditis elegans Hypothetical
protein T10G3.2 protein.
Length = 346
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 300 YLAFPFIGYDFLGQNYTNIPNIAQH 226
+LA I + F G+NY P IA H
Sbjct: 71 FLAIRNITFSFYGENYGKAPRIADH 95
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,396,388
Number of Sequences: 27780
Number of extensions: 262708
Number of successful extensions: 743
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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