Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_D21
(483 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 219 1e-57
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 217 4e-57
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 214 3e-56
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 171 2e-43
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 118 3e-27
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 104 3e-23
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 100 1e-21
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 98 3e-21
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 97 5e-21
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 97 7e-21
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 7e-21
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 9e-21
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 4e-20
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 4e-15
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 7e-14
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 67 6e-12
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 4e-07
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 49 2e-06
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 46 1e-05
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 46 1e-05
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 46 2e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 38 0.006
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 35 0.031
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 29 2.0
SB_38403| Best HMM Match : PP2C (HMM E-Value=8.5e-35) 27 6.1
SB_59335| Best HMM Match : rve (HMM E-Value=0.0065) 27 8.1
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 219 bits (534), Expect = 1e-57
Identities = 99/119 (83%), Positives = 108/119 (90%)
Frame = +1
Query: 127 KMREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATA 306
KMREIVH QAGQCGNQIGAKFWE+IS+EHGIDPTG Y G SDLQLERI+VYYNEA+
Sbjct: 213 KMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEAT---- 268
Query: 307 ESGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 483
GGKYVPRA+L+DLEPGTMD+VRSG +GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 269 --GGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 325
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 217 bits (530), Expect = 4e-57
Identities = 99/118 (83%), Positives = 107/118 (90%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
MREIVH QAGQCGNQIGAKFWE+IS+EHGIDPTG Y G SDLQLERI+VYYNEA+
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEAT----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 483
GGKYVPRAIL+DLEPGTMD+VRSG +GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 56 -GGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 214 bits (523), Expect = 3e-56
Identities = 97/118 (82%), Positives = 107/118 (90%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
MREIV LQAGQCGNQIGAKFWE+IS+EHGIDPTG Y G SDLQLERI+VYYNEA+
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEAT----- 55
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 483
GGKYVPR++L+DLEPGTMD+VRSG +GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 56 -GGKYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 171 bits (417), Expect = 2e-43
Identities = 79/98 (80%), Positives = 87/98 (88%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
MREIVH QAGQCGNQIGAKFWE+IS+EHGIDPTG Y G SDLQLERI+VYYNEA
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEA------ 54
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVF 423
+GGKYVPRAIL+DLEPGTMD+VRSG +GQ+FRPDNFVF
Sbjct: 55 TGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 118 bits (283), Expect = 3e-27
Identities = 50/56 (89%), Positives = 55/56 (98%)
Frame = +1
Query: 316 GKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 483
GKYVPRA+L+DLEPGTMD+VRSG +GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 57
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 104 bits (250), Expect = 3e-23
Identities = 45/58 (77%), Positives = 51/58 (87%)
Frame = +1
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 483
+GG+YVPR+IL+DLEPGTMDAVR G G +FRPDNFV QSGA NNWAKGHY+EGAEL
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAEL 68
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 99.5 bits (237), Expect = 1e-21
Identities = 52/118 (44%), Positives = 68/118 (57%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
MRE + + GQ G QIG WE+ EHGI P G + SD + +N T
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG--QMPSDKTIGGGDDSFNTFFSETG- 57
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 483
GK+VPRA+ +DLEP +D VR+G Y QLF P+ V G+ A NN+A+GHYT G E+
Sbjct: 58 -AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEI 114
Score = 97.1 bits (231), Expect = 7e-21
Identities = 50/117 (42%), Positives = 67/117 (57%)
Frame = +1
Query: 133 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAES 312
RE + + GQ G QIG WE+ EHGI P G + SD + +N T
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDG--QMPSDKTIGGGDDSFNTFFSETG-- 490
Query: 313 GGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 483
GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E+
Sbjct: 491 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEI 547
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 98.3 bits (234), Expect = 3e-21
Identities = 51/118 (43%), Positives = 68/118 (57%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
+RE + + GQ G QIG WE+ EHGI P G + SD + +N T
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDG--QMPSDKTIGGGDDSFNTFFSETG- 642
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 483
GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G EL
Sbjct: 643 -AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEL 699
Score = 96.3 bits (229), Expect = 1e-20
Identities = 50/117 (42%), Positives = 67/117 (57%)
Frame = +1
Query: 133 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAES 312
RE + + GQ G QIG WE+ EHGI P G + SD + +N T
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDG--QMPSDKTIGGGDDSFNTFFSETG-- 121
Query: 313 GGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 483
GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E+
Sbjct: 122 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 178
Score = 52.0 bits (119), Expect = 2e-07
Identities = 29/81 (35%), Positives = 42/81 (51%)
Frame = +1
Query: 133 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAES 312
RE + + GQ G QIG WE+ EHGI P G + SD + +N + +
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDG--QMPSDKTIGGGDDSFN--TFFSETG 569
Query: 313 GGKYVPRAILLDLEPGTMDAV 375
GK+VPRA+ +DLEP + +
Sbjct: 570 AGKHVPRAVFVDLEPTVRECI 590
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 97.5 bits (232), Expect = 5e-21
Identities = 50/118 (42%), Positives = 68/118 (57%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
MRE + + GQ G Q+G WE+ EHGI P G + SD + +N T
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDG--QMPSDKTIGGGDDSFNTFFSETG- 57
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 483
GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E+
Sbjct: 58 -AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 114
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 97.1 bits (231), Expect = 7e-21
Identities = 50/117 (42%), Positives = 67/117 (57%)
Frame = +1
Query: 133 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAES 312
RE + + GQ G QIG WE+ EHGI P G + SD + +N T
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDG--QMPSDKTIGGGDDSFNTFFSETG-- 56
Query: 313 GGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 483
GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E+
Sbjct: 57 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEI 113
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 97.1 bits (231), Expect = 7e-21
Identities = 50/116 (43%), Positives = 66/116 (56%)
Frame = +1
Query: 133 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAES 312
RE + + GQ G QIG WE+ EHGI P G + SD + +N T
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDG--QMPSDKTIGGGDDAFNTFFAETG-- 428
Query: 313 GGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 480
GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E
Sbjct: 429 AGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 484
Score = 94.7 bits (225), Expect = 4e-20
Identities = 49/117 (41%), Positives = 66/117 (56%)
Frame = +1
Query: 133 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAES 312
RE + + GQ G Q+G WE+ EHGI P G + SD + +N T
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDG--QMPSDKTIGGGDDSFNTFFSETG-- 861
Query: 313 GGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 483
GK+VPRA+ DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E+
Sbjct: 862 AGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEM 918
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 96.7 bits (230), Expect = 9e-21
Identities = 50/118 (42%), Positives = 67/118 (56%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
MRE + + GQ G Q+G WE+ EHGI P G + SD + +N T
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDG--QMPSDKTIGGGDDSFNTFFSETGS 58
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 483
GK+VPRA+ DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E+
Sbjct: 59 --GKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEM 114
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 94.7 bits (225), Expect = 4e-20
Identities = 48/116 (41%), Positives = 66/116 (56%)
Frame = +1
Query: 133 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAES 312
RE V + GQ G Q+G WE+ EHGI P G + SD + +N T
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDG--QMPSDKTIGGGDDSFNTFFSETG-- 475
Query: 313 GGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 480
GK+VPRA+ +DLEP +D +R+G Y QLF P+ + G+ A NN+A+GHYT G +
Sbjct: 476 AGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKD 531
Score = 81.8 bits (193), Expect = 3e-16
Identities = 43/103 (41%), Positives = 58/103 (56%)
Frame = +1
Query: 175 IGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAESGGKYVPRAILLDLE 354
+G WE+ EHGI P G + SD + +N T GK+VPRA+ DLE
Sbjct: 1 MGNACWELYCLEHGIQPDG--QMPSDKTIGGGDDSFNTFFSETG--AGKHVPRAVFCDLE 56
Query: 355 PGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 483
P +D VR+G Y QLF P+ + G+ A NN+A+GHYT G +L
Sbjct: 57 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQL 99
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 77.8 bits (183), Expect = 4e-15
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Frame = +1
Query: 202 SEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAES---GGKYVPRAILLDLEPGTMDA 372
S+ G D T G S +Q + V+ E V + S GKYVPRA+L+DLEP +D
Sbjct: 930 SDTEGHDITSSV-GPSPVQYQSSVVHCKEIGVGSKTSEAAAGKYVPRAVLVDLEPTVIDE 988
Query: 373 VRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 483
VR+G Y L+ P+ + G+ A NN+A+GHYT G E+
Sbjct: 989 VRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEM 1025
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 73.7 bits (173), Expect = 7e-14
Identities = 32/60 (53%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = +1
Query: 304 AESG-GKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 480
AE+G GK+VPRA+ +DLEP +D +R+G Y QLF P+ + G+ A NN+A+GHYT G E
Sbjct: 19 AETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKE 78
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 67.3 bits (157), Expect = 6e-12
Identities = 43/117 (36%), Positives = 61/117 (52%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
MRE + + GQ G QIG WE+ EHGI P G + SD +N + +
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG--QMPSDKTQGGGDDSFN--TFFSET 56
Query: 310 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 480
GK+VPRA+ +DLEP T+ A+ P+ + G+ A NN+A+GHYT G +
Sbjct: 57 GAGKHVPRAVFVDLEP-TVVAL---------SPEQLITGKEDAANNYARGHYTIGKQ 103
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 57.6 bits (133), Expect = 5e-09
Identities = 31/83 (37%), Positives = 46/83 (55%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
MRE + + GQ G QIG WE+ EHGI P G + SD ++ +N + +
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDG--QMPSDKTIDGGDDSFN--TFFSET 56
Query: 310 SGGKYVPRAILLDLEPGTMDAVR 378
GGK+VPRA+ +DLEP + ++
Sbjct: 57 GGGKHVPRAVFVDLEPSVVGRMK 79
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 51.2 bits (117), Expect = 4e-07
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = +1
Query: 367 DAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 483
D VR+G Y QLF P+ + G+ A NN+A+GHYT G EL
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEL 51
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +1
Query: 373 VRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 483
VR+G Y QLF P+ + G+ A NN+A+GHYT G EL
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEL 39
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +1
Query: 373 VRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 483
VR+G Y QLF P+ + G+ A NN+A+GHYT G EL
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEL 39
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 46.4 bits (105), Expect = 1e-05
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = +1
Query: 373 VRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 480
VR G Y LF PD + G+ A NN+A+GHYT G E
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKE 38
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 46.4 bits (105), Expect = 1e-05
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +1
Query: 373 VRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 480
+R+G Y QLF P+ + G+ A NN+A+GHYT G E
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKE 38
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 45.6 bits (103), Expect = 2e-05
Identities = 41/119 (34%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Frame = +1
Query: 139 IVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQL-ERISVYYNEASVA---TA 306
IV LQ GQCGNQIG + +++I E D T + +L R Y E S+A T
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVE----DATKLNSRFLCKELTTRSCTEYEEESLARFFTR 58
Query: 307 ESGGKYVPRAILLDLEPGTMDAVRS--GGYGQLFRPDNFVFGQS-GAGNNWAKGHYTEG 474
E+ RA+ +D+E + S G P F Q G+GNNWA G G
Sbjct: 59 ENDDILNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHG 117
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.0 bits (99), Expect = 7e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +1
Query: 187 FWEIISEEHGIDPTGVYRGT-SDLQLERISVYYNE 288
FWE+I+EEHGIDP G S +Q +R++VY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 231
MRE + + GQ G QIG WE+ EHGI P G
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG 229
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +1
Query: 427 QSGAGNNWAKGHYTEGAEL 483
Q+ A NNWAKG YTEGAEL
Sbjct: 2 QNSAANNWAKGFYTEGAEL 20
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 35.1 bits (77), Expect = 0.031
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 331 RAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNW 450
RA+L+D+E G ++ + G +F + SG GNNW
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = +1
Query: 130 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 309
+RE++ LQ G N +G +W I +E Y G S + E T +
Sbjct: 27 VREVITLQFGHYANFVGTHWWNI--QESSF----CYDGASPKSEINHDCLFREGLTVTGQ 80
Query: 310 SGGKYVPRAILLDLE 354
Y PR +L DL+
Sbjct: 81 E--TYTPRLLLYDLK 93
>SB_38403| Best HMM Match : PP2C (HMM E-Value=8.5e-35)
Length = 916
Score = 27.5 bits (58), Expect = 6.1
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +1
Query: 370 AVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGA 477
A RSGGYG L+ G G G W + G+
Sbjct: 623 ATRSGGYGVLWLRGPVATGSGGYGVRWLRDPVATGS 658
>SB_59335| Best HMM Match : rve (HMM E-Value=0.0065)
Length = 1020
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 251 IYNSRESPFIIMRPLLRRRRAVASTCPAPYSSTSNQGPWTPSAP 382
++N S +II L + VAS P STS Q P+ + P
Sbjct: 500 LHNDLVSDYIINNELRTFNQVVASQMEEPQGSTSAQRPYGSAEP 543
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.135 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,410,499
Number of Sequences: 59808
Number of extensions: 243017
Number of successful extensions: 775
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1013948003
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
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