Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_D21
         (483 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    26   0.78 

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 25.8 bits (54), Expect = 0.78
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 130 MREIVHLQAGQCGNQIGAKFWE 195
           MRE + +  GQ G QIG   W+
Sbjct: 1   MRECISVHVGQAGVQIGNPCWD 22



 Score = 24.2 bits (50), Expect = 2.4
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 305 RRAVASTCPAPYSSTSNQGPWTPSAPA 385
           R A ASTCP P SS  ++      APA
Sbjct: 55  RLAQASTCPVPCSSIWSRPSSMRCAPA 81


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.135    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,205
Number of Sequences: 2352
Number of extensions: 8108
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42285900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)