Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_D21
         (483 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   3.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   3.0  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   6.9  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   9.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   9.1  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   9.1  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = +2

Query: 215 ASTLPAFTGAQAIYNSRESPFIIMRPLLRRRRAVASTCPAPYSSTSNQGP 364
           A  +PA  G      + E PF  +   LR  +A  +    P S+T++  P
Sbjct: 50  APNMPAEEGEGMAGVTGEEPFDTLDTFLRELQADLAEASQPTSTTTSVTP 99


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 320 STCPAPYSSTSNQGPWTPSAPAA 388
           +T   P +S +  GP TPSA  A
Sbjct: 224 ATTTLPAASATGTGPATPSAVVA 246


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +2

Query: 299 RRRRAVASTCPAPYSSTSNQGPW 367
           + R   A+ C A Y      GPW
Sbjct: 42  KMRELNATACAALYERVEWSGPW 64


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 207 FGYYLPELCTNLVTALPGLEVHYF 136
           FG     + T +   LPG+ V+Y+
Sbjct: 356 FGEEKARMITTMSLLLPGVAVNYY 379


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -3

Query: 361  SLVRGRGVWRGARTCHRSPPSQQRPHYNKRRFSRVV 254
            SL+ G G+        +SP S Q     +++  RVV
Sbjct: 1035 SLLTGHGLQGQTIFIKQSPSSNQSQQIQQQQLKRVV 1070


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 207 FGYYLPELCTNLVTALPGLEVHYF 136
           FG     + T +   LPG+ V+Y+
Sbjct: 356 FGEEKARMITTMSLLLPGVAVNYY 379


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.315    0.135    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,297
Number of Sequences: 438
Number of extensions: 2027
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)