Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_D20
         (460 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...   114   4e-28
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   1.4  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   1.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   1.4  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   2.4  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   4.2  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   4.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   5.5  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    21   5.5  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   5.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       20   9.6  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    20   9.6  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score =  114 bits (274), Expect = 4e-28
 Identities = 58/136 (42%), Positives = 84/136 (61%), Gaps = 1/136 (0%)
 Frame = +1

Query: 49  EKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERD 228
           +K +KL  +L++      P  +T+IFVETKR A+ +   +      +  +HGD+ Q ER+
Sbjct: 395 DKRSKLVSILEKA-----PNERTLIFVETKRNADFLATFLSEQNIQSTSIHGDRYQSERE 449

Query: 229 EVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTS 408
           + L  FK G   +LVAT VAARGLD+  +++VIN+D P S ++Y+HRIGRTGR   KG +
Sbjct: 450 KALLDFKTGHRKVLVATGVAARGLDIKDVQHVINYDLPKSIDEYVHRIGRTGRVGNKGKA 509

Query: 409 YAFFSPSNSRQ-ARDL 453
            +FF     R  A DL
Sbjct: 510 TSFFDEDQDRNLASDL 525


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 121 IFVETKRKAENITRNIRRYGWPAVC 195
           IFV+++     I  N+    W AVC
Sbjct: 221 IFVKSRPSPATIISNVTVISWQAVC 245


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 121 IFVETKRKAENITRNIRRYGWPAVC 195
           IFV+++     I  N+    W AVC
Sbjct: 221 IFVKSRPSPATIISNVTVISWQAVC 245


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 121 IFVETKRKAENITRNIRRYGWPAVC 195
           IFV+++     I  N+    W AVC
Sbjct: 541 IFVKSRPSPATIISNVTVISWQAVC 565


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 376 RTGRSKAKGTSYAFFSPSNSRQARD 450
           R GR+ A+G  Y  F P +    RD
Sbjct: 70  RYGRAAAQGMPYPRFPPYDRMDIRD 94


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 367 RIGRTGRSKAKGTSYAFFS 423
           RIGR G  K   + Y +FS
Sbjct: 41  RIGRKGELKQHKSDYFYFS 59


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 367 RIGRTGRSKAKGTSYAFFS 423
           RIGR G  K   + Y +FS
Sbjct: 41  RIGRKGELKQHKSDYFYFS 59


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +1

Query: 166 IRRYGWPAVCMHGDKTQQERD 228
           +RRYGW A      K Q  RD
Sbjct: 590 MRRYGWTANMERIMKAQALRD 610


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 199 HGDKTQQERDEV 234
           HGDK  QER +V
Sbjct: 29  HGDKPPQERPKV 40


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = -2

Query: 192 HSWPSISSDISGNVLRFSFSFNKYNGLCTRVLVLPNL 82
           +S P+++ +++GN+    +    YN L    +V  +L
Sbjct: 476 NSLPTVALEVAGNISSLRYLNLDYNDLSAVPIVTHSL 512


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 9/34 (26%), Positives = 14/34 (41%)
 Frame = +3

Query: 90  AKPRPWCKDHYIC*N*KKSGEHYQKYQTIWMASC 191
           +KP    K  Y C N      H + +  ++  SC
Sbjct: 256 SKPFQCNKCDYTCVNKSMLNSHMKSHSNVYRYSC 289


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 9/34 (26%), Positives = 14/34 (41%)
 Frame = +3

Query: 90  AKPRPWCKDHYIC*N*KKSGEHYQKYQTIWMASC 191
           +KP    K  Y C N      H + +  ++  SC
Sbjct: 14  SKPFQCNKCDYTCVNKSMLNSHMKSHSNVYRYSC 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.133    0.384 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,128
Number of Sequences: 336
Number of extensions: 2641
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)