Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_D20
(460 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 176 2e-45
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 130 1e-31
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 120 1e-28
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 117 8e-28
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 109 2e-25
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 104 6e-24
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 103 1e-23
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 102 3e-23
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 94 8e-21
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 92 3e-20
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 88 5e-19
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 86 3e-18
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 83 1e-17
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 83 2e-17
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 81 1e-16
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 80 1e-16
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 78 6e-16
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 76 2e-15
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 76 3e-15
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 73 3e-14
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 64 1e-11
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 62 4e-11
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 56 3e-09
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 56 3e-09
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 54 1e-08
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 53 2e-08
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 53 2e-08
SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase |Schizosa... 51 1e-07
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 49 3e-07
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 35 0.005
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 30 0.20
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 28 0.60
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 28 0.79
SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal |Schizos... 27 1.8
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 26 3.2
SPBC16H5.10c |prp43||ATP-dependent RNA helicase Prp43|Schizosacc... 26 3.2
SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit S... 26 3.2
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 25 4.2
SPBC3D6.09 |dpb4||DNA polymerase epsilon subunit Dpb4 |Schizosac... 25 4.2
SPBC25D12.06 |||RNA helicase |Schizosaccharomyces pombe|chr 2|||... 25 5.6
SPAC3C7.03c |rhp55||RecA family ATPase Rhp55|Schizosaccharomyces... 25 5.6
SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|... 25 7.3
SPAC22E12.09c |krp1|krp|kexin|Schizosaccharomyces pombe|chr 1|||... 25 7.3
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 25 7.3
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 24 9.7
SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|ch... 24 9.7
SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 24 9.7
SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1 |Schiz... 24 9.7
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 176 bits (428), Expect = 2e-45
Identities = 81/153 (52%), Positives = 116/153 (75%)
Frame = +1
Query: 1 AQDHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYG 180
A HNI QIV+V +K +L ++E+ +++D K +IF TKR A++ITR +R+ G
Sbjct: 336 AASHNIKQIVEVVDNADKRARLGKDIEEVLKDRDN--KVLIFTGTKRVADDITRFLRQDG 393
Query: 181 WPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDY 360
WPA+ +HGDK Q ERD VL +F+ G+S I+VATDVA+RG+DV GI +V N+D+P ++EDY
Sbjct: 394 WPALAIHGDKAQDERDWVLNEFRTGKSPIMVATDVASRGIDVKGITHVFNYDFPGNTEDY 453
Query: 361 IHRIGRTGRSKAKGTSYAFFSPSNSRQARDLVS 459
+HRIGRTGR+ AKGT+Y +F+ N++QAR+LVS
Sbjct: 454 VHRIGRTGRAGAKGTAYTYFTSDNAKQARELVS 486
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 130 bits (313), Expect = 1e-31
Identities = 60/137 (43%), Positives = 91/137 (66%)
Frame = +1
Query: 46 HEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQER 225
H ++++ L +I P T+IFVETKR A+ +T + +PA +HGD+TQ+ER
Sbjct: 410 HVEDSEKRSYLLDILHTLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRER 469
Query: 226 DEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGT 405
+ L F+ GR+SI+VAT VA+RGLD+ + +VIN+D P +DY+HRIGRTGR+ G
Sbjct: 470 ERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGQ 529
Query: 406 SYAFFSPSNSRQARDLV 456
+ AFF+ +N A++L+
Sbjct: 530 AVAFFNRNNKGIAKELI 546
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 120 bits (288), Expect = 1e-28
Identities = 64/154 (41%), Positives = 94/154 (61%), Gaps = 1/154 (0%)
Frame = +1
Query: 1 AQDHNILQIVDVCQE-HEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRY 177
A NI QIV++ + KE L+ LL++ + K +IFV K++A + + R
Sbjct: 381 AASQNITQIVEILDDPRSKERMLDNLLRKHLSSGGKDDKILIFVLYKKEAARVEGTLARK 440
Query: 178 GWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSED 357
+ V +HGD +Q R + L FK G+ +LVATDVAARGLD+ ++ VIN +P + ED
Sbjct: 441 -YNVVGIHGDMSQGARLQALNDFKSGKCPVLVATDVAARGLDIPKVQLVINVTFPLTIED 499
Query: 358 YIHRIGRTGRSKAKGTSYAFFSPSNSRQARDLVS 459
Y+HRIGRTGR+ KGT+ FF+P + A +LV+
Sbjct: 500 YVHRIGRTGRANTKGTAITFFTPQDKSHAGELVN 533
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 117 bits (282), Expect = 8e-28
Identities = 55/144 (38%), Positives = 88/144 (61%)
Frame = +1
Query: 22 QIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMH 201
QIV+V E K ++L LL E+ NQ +T++FV+ + A+ + ++ + G+ + +H
Sbjct: 641 QIVEVRPEESKFSRLLELLGELYNNQ-LDVRTLVFVDRQESADALLSDLMKRGYTSNSIH 699
Query: 202 GDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRT 381
G K Q +RD + +K G +L+AT V ARGLDV ++ V+N+D PN EDY+HR+GRT
Sbjct: 700 GGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRT 759
Query: 382 GRSKAKGTSYAFFSPSNSRQARDL 453
GR+ G + F +P + A D+
Sbjct: 760 GRAGHTGVAVTFITPEQEKYAVDI 783
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 109 bits (262), Expect = 2e-25
Identities = 50/126 (39%), Positives = 75/126 (59%)
Frame = +1
Query: 76 LQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEG 255
++EI ++ IIFV KR E I + + GW AV +HG K+Q++R+ + Q +
Sbjct: 506 VEEILESNRFSPPIIIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNK 565
Query: 256 RSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFSPSNS 435
+ ILVATD+A RG+D+ + V+N++ S EDY HRIGRTGR+ GT+ F P ++
Sbjct: 566 TADILVATDIAGRGIDIPNVSLVLNYNMAKSIEDYTHRIGRTGRAGKSGTAITFLGPEDT 625
Query: 436 RQARDL 453
DL
Sbjct: 626 DVYYDL 631
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 104 bits (250), Expect = 6e-24
Identities = 45/114 (39%), Positives = 72/114 (63%)
Frame = +1
Query: 112 KTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAA 291
+ +IF ++RK + +T +R + MHG+ Q+ERD ++ F++G S +L+ TD+ A
Sbjct: 262 QAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWA 321
Query: 292 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFSPSNSRQARDL 453
RG+DV + VIN+D P + E+YIHRIGR+GR KG + F + + R RD+
Sbjct: 322 RGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTNEDVRILRDI 375
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 103 bits (248), Expect = 1e-23
Identities = 53/149 (35%), Positives = 81/149 (54%)
Frame = +1
Query: 10 HNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPA 189
H + Q +E K K+N LL + NQ +IFV++ +A + R +R +P+
Sbjct: 268 HGLQQHYVKLEEKAKNRKINDLLDSLEFNQ-----VVIFVKSVSRANELDRLLRECNFPS 322
Query: 190 VCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHR 369
+C+HG Q+ER + FK+ I VATDV RG+D++ + VIN+D P+S + Y+HR
Sbjct: 323 ICIHGGLPQEERIKRYKAFKDFDKRICVATDVFGRGIDIERVNIVINYDMPDSPDSYLHR 382
Query: 370 IGRTGRSKAKGTSYAFFSPSNSRQARDLV 456
+GR GR KG + F S Q D +
Sbjct: 383 VGRAGRFGTKGLAITFSSSEEDSQILDKI 411
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 102 bits (244), Expect = 3e-23
Identities = 46/114 (40%), Positives = 70/114 (61%)
Frame = +1
Query: 112 KTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAA 291
+ +IF T+RK + +T + + MHGD Q +RD ++++F+ G S IL+ TD+ A
Sbjct: 260 QAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLA 319
Query: 292 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFSPSNSRQARDL 453
RG+DV + VIN+D P + E+YIHRIGR GR KG S F + + R R++
Sbjct: 320 RGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTNDDVRMMREI 373
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 94.3 bits (224), Expect = 8e-21
Identities = 45/118 (38%), Positives = 73/118 (61%)
Frame = +1
Query: 70 VLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFK 249
V+L+++ N + + +IFV+ +A+ + + +HG+ Q +R+E L +F+
Sbjct: 276 VILRQMISNGELKPRVVIFVQDIERAKALYTELLFDEIHVGVIHGELPQAKREEALAKFR 335
Query: 250 EGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFS 423
+G +L+ATD+ ARG+D G+K VINFD+P S YIHRIGRTGR+ G + FF+
Sbjct: 336 KGEIWVLIATDLLARGIDFHGVKMVINFDFPQSVHSYIHRIGRTGRAGNTGQAVTFFT 393
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 92.3 bits (219), Expect = 3e-20
Identities = 47/107 (43%), Positives = 62/107 (57%)
Frame = +1
Query: 94 NQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILV 273
N+ G IIF T + + +R G+ A+ +HG +Q R L +FK G S LV
Sbjct: 281 NELAGNSIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGARSTLV 340
Query: 274 ATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYA 414
ATDVAARGLD+ + VIN+D P S+ YIHR+GRT R+ G S A
Sbjct: 341 ATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVGRTARAGRAGKSIA 387
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 88.2 bits (209), Expect = 5e-19
Identities = 44/136 (32%), Positives = 71/136 (52%)
Frame = +1
Query: 16 ILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVC 195
+ Q E +K + LN L ++ NQ +IIF + + E + + I G+
Sbjct: 256 VTQYYAFVDESQKVHCLNTLFSKLQINQ-----SIIFCNSTNRVELLAKKITELGYSCFY 310
Query: 196 MHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 375
H Q R+ V + F+ G LV +D+ RG+D+ + VINFD+P ++E Y+HRIG
Sbjct: 311 SHAKMLQSHRNRVFHNFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIG 370
Query: 376 RTGRSKAKGTSYAFFS 423
R+GR +G + +F S
Sbjct: 371 RSGRFGHRGLAISFIS 386
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 85.8 bits (203), Expect = 3e-18
Identities = 44/97 (45%), Positives = 58/97 (59%)
Frame = +1
Query: 118 IIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARG 297
IIFV R AE I +R +H + Q+ER L +F+ + ILVATDVA+RG
Sbjct: 262 IIFVNRTRTAELIYSILRLLELRVTELHSEMVQRERINSLGRFRAEAAKILVATDVASRG 321
Query: 298 LDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTS 408
LD+ ++ VINFD P +DYIHR+GRT R+ G S
Sbjct: 322 LDIPSVQLVINFDLPRDPDDYIHRVGRTARAGRSGES 358
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 83.4 bits (197), Expect = 1e-17
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +1
Query: 112 KTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAA 291
K I+F+ + + + + P + +HG + QQ R ++F IL+ T+VAA
Sbjct: 338 KVIVFMSSCASVKYMAELLNYIDLPVLDLHGKQKQQRRTNTFFEFCNAEKGILLCTNVAA 397
Query: 292 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGR-SKAKGTSYAFFSPS 429
RGLD+ + +++ +D P+ DYIHR+GRT R +K G S F +PS
Sbjct: 398 RGLDIPAVDWIVQYDPPDDPRDYIHRVGRTARGTKGTGKSLMFLAPS 444
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 83.0 bits (196), Expect = 2e-17
Identities = 52/146 (35%), Positives = 75/146 (51%), Gaps = 6/146 (4%)
Frame = +1
Query: 16 ILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVC 195
I Q+ CQ +E+K NVL++ G ++IIF + K AE I R + G C
Sbjct: 326 IKQLYMDCQS--EEHKYNVLVELYGLLTI--GQSIIFCKKKDTAEEIARRMTADGHTVAC 381
Query: 196 MHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYP------NSSED 357
+ G+ +RD ++ F+ G S +LV T+V ARG+DV + V+N+D P +
Sbjct: 382 LTGNLEGAQRDAIMDSFRVGTSKVLVTTNVIARGIDVSQVNLVVNYDMPLDQAGRPDPQT 441
Query: 358 YIHRIGRTGRSKAKGTSYAFFSPSNS 435
Y+HRIGRTGR G S F S
Sbjct: 442 YLHRIGRTGRFGRVGVSINFVHDKKS 467
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 80.6 bits (190), Expect = 1e-16
Identities = 40/134 (29%), Positives = 73/134 (54%)
Frame = +1
Query: 52 KENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDE 231
K+ K + L G T++FV TK E ++ + + G+ ++G Q+ R
Sbjct: 328 KKRKRALELALKGSESGSPDSTLVFVPTKHHVEYVSELLVQAGYSVSKIYGSLDQEARLN 387
Query: 232 VLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSY 411
+ F+ G++++LV TDVA+RG+D+ + VIN+D+P + ++HR+GRT R+ G +Y
Sbjct: 388 EINNFRLGKTNLLVVTDVASRGIDIPLLANVINYDFPPQPKVFVHRVGRTARAGRTGWAY 447
Query: 412 AFFSPSNSRQARDL 453
+ ++ DL
Sbjct: 448 SLVRAEDAGYLLDL 461
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 80.2 bits (189), Expect = 1e-16
Identities = 38/97 (39%), Positives = 60/97 (61%)
Frame = +1
Query: 112 KTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAA 291
+TIIF +K A + A +HG +Q++R L F++G+ + L+ATDVA+
Sbjct: 506 RTIIFFRSKAFAHKMRVIFGLLSLNATEIHGSLSQEQRVRALEDFRDGKCNYLLATDVAS 565
Query: 292 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKG 402
RG+D+ GI+ VIN++ P + E Y+HR+GRT R+ G
Sbjct: 566 RGIDIKGIEVVINYEAPATHEVYLHRVGRTARAGRSG 602
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 78.2 bits (184), Expect = 6e-16
Identities = 39/117 (33%), Positives = 63/117 (53%)
Frame = +1
Query: 103 PGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATD 282
PG KT++F + IT + P+ +H Q++R + L +FK +LV TD
Sbjct: 389 PG-KTMVFANGIEDIKRITPFLNELKVPSYPLHAQLDQKKRLQSLEKFKNNPKGVLVCTD 447
Query: 283 VAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFSPSNSRQARDL 453
VAARG+D+ + +VI++ P++++ Y+HR GRT R+ G S P Q + L
Sbjct: 448 VAARGIDIPSVTHVIHYHVPHTADMYVHRSGRTARANEDGVSILMCGPKELSQLKRL 504
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 76.2 bits (179), Expect = 2e-15
Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Frame = +1
Query: 112 KTIIFVETKRKAENITRNIRRY--GWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDV 285
KTI+F+ + ++ + RR G + +HG + Q R EV +F R +L TD+
Sbjct: 285 KTIVFLSSCKQVRFVYETFRRMRPGISLLHLHGKQKQTTRTEVTAKFTSSRHVVLFCTDI 344
Query: 286 AARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFSPSNSRQARDLVS 459
ARGLD + +VI D P + YIHR+GRT R G + PS + L S
Sbjct: 345 VARGLDFPAVDWVIQLDAPEDVDTYIHRVGRTARYNRSGNALLLLLPSEEAFLKRLES 402
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 75.8 bits (178), Expect = 3e-15
Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Frame = +1
Query: 73 LLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRY-GWPAVCMHGDKTQQERDEVLYQFK 249
LLQ++ + +P ++ I+F+ T + + + + P +H T +R + F+
Sbjct: 282 LLQQL-TSSNPSSRIIVFLPTISMVDFVGGVLENHLKIPCFILHSGLTTAQRRSITESFR 340
Query: 250 EGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSY 411
+ +S IL ATDV ARG+D I V+ P++++DYIHRIGRTGR+ G +Y
Sbjct: 341 KCQSGILFATDVVARGMDFPNITQVVQITGPSNTDDYIHRIGRTGRAGKTGEAY 394
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 72.5 bits (170), Expect = 3e-14
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Frame = +1
Query: 196 MHGDKTQQERDEVLYQFKEGRSS---ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIH 366
+HG +QQ R L F S IL+ TDVAARGLD+ + V+ +D P S++DY+H
Sbjct: 473 LHGSLSQQIRTSTLNLFSSSEDSGSHILLCTDVAARGLDLPNVDLVVQYDAPFSTDDYLH 532
Query: 367 RIGRTGRSKAKGTSYAFFSPSNS 435
RIGRT R+ G + F P S
Sbjct: 533 RIGRTARAGHNGAAIMFLLPKES 555
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 63.7 bits (148), Expect = 1e-11
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Frame = +1
Query: 112 KTIIFVETKRKAENITRNIRRYGWP--AVCMHGDKTQQERDEVLYQFKEG-RSSILVATD 282
K I+F + E Y P V +HG + Q R +FK+ + ++L TD
Sbjct: 258 KAIVFFSSCASVEYFNSLFLTYKLPFEIVALHGQQVQSNRSRNFEKFKKSNKKTVLFTTD 317
Query: 283 VAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFSPSNSRQARDLV 456
+A+RGLD+ + +V+ D P + + HR GR GR+ G + + + +L+
Sbjct: 318 IASRGLDIPNVDFVLQLDPPLDPKSFSHRCGRAGRAGRAGVAIVLLNDGREEEYEELL 375
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 62.1 bits (144), Expect = 4e-11
Identities = 29/82 (35%), Positives = 47/82 (57%)
Frame = +1
Query: 211 TQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 390
++ ER +++ +F G ++LV +D+ ARG+DV + VIN+D P S Y+HRIGRT R+
Sbjct: 472 SRDERKKIISRFATGDLNLLVCSDLMARGIDVANTQNVINYDPPLSVRSYVHRIGRTARA 531
Query: 391 KAKGTSYAFFSPSNSRQARDLV 456
+G ++ LV
Sbjct: 532 GREGFAWTLVQSHEGHHFSKLV 553
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 56.0 bits (129), Expect = 3e-09
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +1
Query: 289 ARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFSPSN 432
ARGLD + + V+NFD P++++ YIHRIGRT R+ GT+ +F P +
Sbjct: 387 ARGLDFENVACVLNFDMPSNTKSYIHRIGRTARAGKPGTAMSFVVPKS 434
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 56.0 bits (129), Expect = 3e-09
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 11/133 (8%)
Frame = +1
Query: 46 HEKENKLNVLLQE-IGQNQDPGAKTIIFVETKRKAENITRNIRRY----------GWPAV 192
H K L ++ E + Q + +IFVE + AE I R + ++ G AV
Sbjct: 411 HPKLEHLERIVTEYFEKEQTKDTRIMIFVEIRSSAEEILRFLGKFYPNVRPAIFIGQSAV 470
Query: 193 CMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRI 372
+Q+ ++E + QF++G + L+AT + GLD+ + +I +D S + R+
Sbjct: 471 RKAAGMSQKLQNETVKQFQKGEVNTLIATSIGEEGLDIGEVDMIICYDASASPIRMLQRM 530
Query: 373 GRTGRSKAKGTSY 411
GRTGR K KG Y
Sbjct: 531 GRTGR-KRKGYIY 542
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 53.6 bits (123), Expect = 1e-08
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Frame = +1
Query: 118 IIFVETKRKAENITRNIRR-YGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAAR 294
II+ ++ E + +R YG A H + ER + +++ G I+VAT
Sbjct: 746 IIYCLSRTSCEQVAAKLRNDYGLKAWHYHAGLEKVERQRIQNEWQSGSYKIIVATIAFGM 805
Query: 295 GLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFS 423
G+D +++VI+ +P S E Y GR GR F+S
Sbjct: 806 GVDKGDVRFVIHHSFPKSLEGYYQETGRAGRDGKPAHCIMFYS 848
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 53.2 bits (122), Expect = 2e-08
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Frame = +1
Query: 112 KTIIFVETKRKAENITRNIRR---YGWPAVCMH-GDKTQQERDEVLYQFKE--GRSSILV 273
+ IIF TK+ E I R + + + V ++ GD + +ER F+ G++ I++
Sbjct: 1417 RAIIFCRTKKDVEYIHRRLHQSDLFAHTHVTIYTGDVSDEERQMNFDAFRNANGKTRIMI 1476
Query: 274 ATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFSPSNS 435
AT G++ G++ V+++ P SS DY+ GR GR + F+ +S
Sbjct: 1477 ATKAFGLGINYMGVRLVVHYGLPASSMDYVQETGRAGRDGKYAIAALFYEKYDS 1530
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 53.2 bits (122), Expect = 2e-08
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Frame = +1
Query: 112 KTIIFVETKRKAENITRNIRR---YGWPAVCMH-GDKTQQERDEVLYQFKE--GRSSILV 273
+ IIF TK+ E I R + + + V ++ GD + +ER F+ G++ I++
Sbjct: 1417 RAIIFCRTKKDVEYIHRRLHQSDLFAHTHVTIYTGDVSDEERQMNFDAFRNANGKTRIMI 1476
Query: 274 ATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFSPSNS 435
AT G++ G++ V+++ P SS DY+ GR GR + F+ +S
Sbjct: 1477 ATKAFGLGINYMGVRLVVHYGLPASSMDYVQETGRAGRDGKYAIAALFYEKYDS 1530
>SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 50.8 bits (116), Expect = 1e-07
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 13/142 (9%)
Frame = +1
Query: 10 HNILQIVDVCQEHEKENKLNVLLQEIGQNQDPG---AKTIIFVETKRKAENITRNIRRY- 177
HN +Q + + H K N L LL+E ++ G + +IF E + AE IT +
Sbjct: 438 HNKIQGLSL--NHPKMNHLLELLKEHFKDTSEGYQNQRVMIFTEFRNTAEYITTTLLAIR 495
Query: 178 ---------GWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVIN 330
G Q ++ E + QF+ G + LVAT + GLD+ +I
Sbjct: 496 PMVRASLFIGQANSAYSTGMNQMQQKETIDQFRAGVINTLVATSIGEEGLDIGDTDMIIC 555
Query: 331 FDYPNSSEDYIHRIGRTGRSKA 396
+D +S I R+GRTGR K+
Sbjct: 556 YDASSSPIRTIQRMGRTGRKKS 577
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 49.2 bits (112), Expect = 3e-07
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 12/146 (8%)
Frame = +1
Query: 19 LQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCM 198
+ + D +K KL LL+ + D +T+IFVE K A ++ ++ P +
Sbjct: 333 IPVFDSTDVTDKVFKLLELLKATYRKSD-SVRTVIFVERKATAFTLSLFMKTLNLPNIRA 391
Query: 199 H-----GDKTQQE-------RDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYP 342
H G Q E + + L++FK G+ ++L+AT VA G+DV VI F+
Sbjct: 392 HSFIGHGPSDQGEFSMTFRRQKDTLHKFKTGKYNVLIATAVAEEGIDVPSCNLVIRFNIC 451
Query: 343 NSSEDYIHRIGRTGRSKAKGTSYAFF 420
+ Y+ GR++A + + F
Sbjct: 452 RTVTQYVQ---SRGRARAMASKFLIF 474
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 35.1 bits (77), Expect = 0.005
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 211 TQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGR 387
T QER ++ + G+ ++AT+ G+D+ + VI +P S + + GR GR
Sbjct: 595 TVQERRKIESEMFNGKLYGIIATNALELGIDIGSLDAVITIGFPYSLSNLRQQFGRAGR 653
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 29.9 bits (64), Expect = 0.20
Identities = 20/102 (19%), Positives = 47/102 (46%)
Frame = +1
Query: 25 IVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHG 204
++ V Q H E ++L+ GQ + + I++ +K ++I + + ++
Sbjct: 707 LMTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYERSKMLGDSIPELV------ILPVYS 760
Query: 205 DKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVIN 330
+ + + G +++AT++A L +DGI YV++
Sbjct: 761 ALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVD 802
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 28.3 bits (60), Expect = 0.60
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 253 GRSSILVATDVAARGLDVDGIKYVINFDY 339
G ++VAT++A L V GI YV++ Y
Sbjct: 757 GVRKVVVATNIAETSLTVHGISYVVDTGY 785
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 27.9 bits (59), Expect = 0.79
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 211 TQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVIN 330
T +++ +V EG +VAT+VA + + I+YV++
Sbjct: 712 TTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVD 751
>SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 1.8
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +1
Query: 196 MHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVIN 330
+H T E+ V + ++ +T++A + +DGI YV++
Sbjct: 275 LHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVD 319
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 25.8 bits (54), Expect = 3.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 249 FKLV*YFIPFLLCFVTVHAHSWPSIS 172
+KL +PFL V HA WPS++
Sbjct: 30 YKLWKQNVPFLYDLVITHALEWPSLT 55
>SPBC16H5.10c |prp43||ATP-dependent RNA helicase
Prp43|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 25.8 bits (54), Expect = 3.2
Identities = 8/22 (36%), Positives = 17/22 (77%)
Frame = +1
Query: 265 ILVATDVAARGLDVDGIKYVIN 330
++++T++A L +DGI YV++
Sbjct: 354 VVISTNIAETSLTIDGIVYVVD 375
>SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit
Sfc6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 582
Score = 25.8 bits (54), Expect = 3.2
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 378 PTNSMNVILRGIWIIKINHIFDSIHIKTSGSN-ISCYKYTGTTLFK 244
PTN L ++K + +S+ ++TSG N I +K T FK
Sbjct: 216 PTNKETQFLAVGGMLKFSETTESVFMRTSGRNQIQLWKLENKTNFK 261
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 25.4 bits (53), Expect = 4.2
Identities = 19/99 (19%), Positives = 46/99 (46%)
Frame = +1
Query: 34 VCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKT 213
+ Q H K ++L+ GQ++ + +I +K+ N+ + A +
Sbjct: 295 IFQLHTKLPPGDILVFLTGQDEIEALEALIKSYSKQLPSNLPQI------QACPLFASLP 348
Query: 214 QQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVIN 330
Q+++ +V ++++T++A + + GI+YVI+
Sbjct: 349 QEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVID 387
>SPBC3D6.09 |dpb4||DNA polymerase epsilon subunit Dpb4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 210
Score = 25.4 bits (53), Expect = 4.2
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 95 TKTLVQR-PLYLLKLKEKRRTLPEISD 172
+KTL + Y L LKEKR LP +SD
Sbjct: 89 SKTLKKHLEAYELALKEKRLKLPNVSD 115
>SPBC25D12.06 |||RNA helicase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 565
Score = 25.0 bits (52), Expect = 5.6
Identities = 15/54 (27%), Positives = 21/54 (38%)
Frame = +1
Query: 265 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFSP 426
+ VA RGL + I ++ + S Y H GR G G + F P
Sbjct: 474 VFVANPSEIRGLHLPSITHIFHLWSTFSGVAYQHIAGRLGAMGQTGKIFNFIIP 527
>SPAC3C7.03c |rhp55||RecA family ATPase Rhp55|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 350
Score = 25.0 bits (52), Expect = 5.6
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +1
Query: 298 LDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTS 408
L +D + I YP S EDY + R SK S
Sbjct: 146 LIIDNLSMPIQLAYPTSPEDYAYLRLRRNTSKKSSLS 182
>SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 491
Score = 24.6 bits (51), Expect = 7.3
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +3
Query: 147 GEHYQKYQTIWMASCVH 197
GE+Y+K + IW C++
Sbjct: 14 GENYEKNKDIWRRQCIY 30
>SPAC22E12.09c |krp1|krp|kexin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 709
Score = 24.6 bits (51), Expect = 7.3
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3
Query: 308 STSRPLAATSVATSILERPSLNWYNTSSLSCCVLSP 201
S + PLA+ A ++ RP L+W + ++ SP
Sbjct: 371 SAAAPLASAVYALALSIRPDLSWRDIQHITVYSASP 406
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 24.6 bits (51), Expect = 7.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 119 LYLLKLKEKRRTLPEISDDMDG 184
LYL L+EKRRT +S+ +G
Sbjct: 213 LYLESLREKRRTYTPLSEISNG 234
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 24.2 bits (50), Expect = 9.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 320 YLIPSTSRPLAATSVATSILERPS 249
YL + ++P+A+ SVAT I PS
Sbjct: 11 YLSSAPTKPIASGSVATGIDSMPS 34
>SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 783
Score = 24.2 bits (50), Expect = 9.7
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = -2
Query: 339 IIKINHIFDSIHIKTSGSNISCYKY 265
I+ H+ +H+ + S +SCY +
Sbjct: 564 ILAARHLISLVHLLQNHSQLSCYSF 588
>SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 24.2 bits (50), Expect = 9.7
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +1
Query: 340 PNSSEDYIHRIGRTGRSKAKGTSYAFFSPSNSRQARDL 453
P SS+ + I K + F PSNS +DL
Sbjct: 246 PLSSQQILPAISNNTSEKPDSNNCGFLLPSNSTSIKDL 283
>SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 255
Score = 24.2 bits (50), Expect = 9.7
Identities = 11/47 (23%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 307 DGIKYVINFDYPNSS--EDYIHRIGRTGRSKAKGTSYAFFSPSNSRQ 441
DG K+V++ DYP+ + ++ H + + +K ++ + SN ++
Sbjct: 97 DGAKFVVSTDYPDPALIDNLEHNVKQYAEIASKISAVGYLWGSNIKE 143
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.133 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,046,719
Number of Sequences: 5004
Number of extensions: 42815
Number of successful extensions: 202
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 172312850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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