Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_D20
(460 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 126 7e-30
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 8e-28
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 1e-24
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 109 1e-24
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 4e-20
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 94 6e-20
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 94 6e-20
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 89 2e-18
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 86 1e-17
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 86 1e-17
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 84 6e-17
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 2e-16
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 73 5e-16
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 80 8e-16
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 80 8e-16
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 80 8e-16
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 79 2e-15
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 5e-15
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 1e-14
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 76 2e-14
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 75 4e-14
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 71 5e-13
SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11) 60 7e-10
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 60 1e-09
SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 6e-08
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32) 52 2e-07
SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017) 52 3e-07
SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017) 52 3e-07
SB_1038| Best HMM Match : Helicase_C (HMM E-Value=1.1e-10) 51 4e-07
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 50 7e-07
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 49 2e-06
SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18) 48 5e-06
SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20) 48 5e-06
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 47 9e-06
SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 9e-06
SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19) 46 2e-05
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 44 8e-05
SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27) 44 8e-05
SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 42 2e-04
SB_9751| Best HMM Match : Helicase_C (HMM E-Value=3.4e-05) 39 0.002
SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23) 39 0.002
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 36 0.012
SB_7386| Best HMM Match : Helicase_C (HMM E-Value=0.086) 33 0.086
SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_1215| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.26
SB_12766| Best HMM Match : Helicase_C (HMM E-Value=5.8e-09) 31 0.61
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 29 1.8
SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_21686| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.2
SB_54662| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_49454| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_52816| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_44906| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_46577| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_2368| Best HMM Match : Patched (HMM E-Value=8.6e-08) 27 9.9
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 126 bits (305), Expect = 7e-30
Identities = 64/149 (42%), Positives = 98/149 (65%), Gaps = 1/149 (0%)
Frame = +1
Query: 13 NILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAV 192
+I Q V ++EK ++L +L + G + +T++FVE+KR A+ + + G+P
Sbjct: 936 DIEQTVIEVTDNEKRDRLTQILGDAGTD-----RTLVFVESKRSADFLAIFLSGEGFPTT 990
Query: 193 CMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRI 372
+HGD+ QQER+E L F++GR +L+AT+VAARGLD+D +K+VINFD P+ ++Y+HRI
Sbjct: 991 SIHGDRLQQEREEALDDFRKGRCPVLIATNVAARGLDIDDVKHVINFDLPSDIDEYVHRI 1050
Query: 373 GRTGRSKAKGTSYAFF-SPSNSRQARDLV 456
GRTGR KG + FF + + AR LV
Sbjct: 1051 GRTGRIGNKGKATTFFLRGRDDKVARGLV 1079
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 120 bits (288), Expect = 8e-28
Identities = 64/148 (43%), Positives = 92/148 (62%)
Frame = +1
Query: 13 NILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAV 192
NI Q V E +K + L LL G Q T++FVETK+ A+ + + + G+
Sbjct: 1073 NITQKVVWVDEFDKRSFLLDLLNASGPQQ----LTLVFVETKKGADALEMFLAKDGYYCT 1128
Query: 193 CMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRI 372
+HGD++Q+ER+E L F+ G + ILVAT VAARGLD+ +K+VINFD P E+Y+HRI
Sbjct: 1129 SIHGDRSQREREEALRTFRCGDTPILVATAVAARGLDIPNVKHVINFDLPTDIEEYVHRI 1188
Query: 373 GRTGRSKAKGTSYAFFSPSNSRQARDLV 456
GRTGR G + +FF+ N A++L+
Sbjct: 1189 GRTGRVGHTGLATSFFNHKNKNVAKELM 1216
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 109 bits (261), Expect = 1e-24
Identities = 50/114 (43%), Positives = 72/114 (63%)
Frame = +1
Query: 112 KTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAA 291
+ +IF TKRK + +T +R + MHGD Q+ER+ ++ F+ G+S +L++TDV A
Sbjct: 238 QAVIFCNTKRKVDWLTEKMREANFTVASMHGDMPQKEREAIMKDFRAGQSRVLISTDVWA 297
Query: 292 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFSPSNSRQARDL 453
RGLDV + VIN+D PN+ E YIHRIGR+GR KG + F + R RD+
Sbjct: 298 RGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDI 351
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 109 bits (261), Expect = 1e-24
Identities = 66/151 (43%), Positives = 92/151 (60%)
Frame = +1
Query: 7 DHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWP 186
+H ILQIVDVC++HEKE+ + + I +T+IF ETKR+A+ +TR +R G
Sbjct: 275 NHKILQIVDVCEDHEKEHNVGSFIGGIVILSS--LQTLIFTETKRRADELTRKLRSDG-- 330
Query: 187 AVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIH 366
C Q+ R Y + I+VA D+ IK+VINFD+PN +EDY+H
Sbjct: 331 --C----GIQRPR----YVSVDMAVVIMVA--------DISDIKFVINFDFPNCTEDYVH 372
Query: 367 RIGRTGRSKAKGTSYAFFSPSNSRQARDLVS 459
RIGRT RS GTSY FF+ +N++QA++LVS
Sbjct: 373 RIGRTARSDRTGTSYTFFTVNNAKQAKELVS 403
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 94.3 bits (224), Expect = 4e-20
Identities = 42/81 (51%), Positives = 56/81 (69%)
Frame = +1
Query: 214 QQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSK 393
Q +R++ L FK G + IL+ATDVA+RGLD+ I YVIN+D+P EDY+HR+GRTGR+
Sbjct: 78 QYDREQALDDFKTGLARILIATDVASRGLDIKDITYVINYDFPRHIEDYVHRVGRTGRAG 137
Query: 394 AKGTSYAFFSPSNSRQARDLV 456
GTS F S + R A L+
Sbjct: 138 RSGTSLTFISREDWRSAHKLI 158
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 93.9 bits (223), Expect = 6e-20
Identities = 45/126 (35%), Positives = 72/126 (57%)
Frame = +1
Query: 10 HNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPA 189
H + Q +E +K + LN L Q++ NQ +IIF + ++ E + R I G+
Sbjct: 264 HGVTQYYAFVEEKQKVHCLNTLFQKLQINQ-----SIIFCNSVQRVELLARKILELGFSC 318
Query: 190 VCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHR 369
+H +Q R+ V + F++G LV +D+ RG+D+ + VINFD+P +SE Y+HR
Sbjct: 319 FYIHARMSQSHRNRVFHDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNSETYLHR 378
Query: 370 IGRTGR 387
IGR+GR
Sbjct: 379 IGRSGR 384
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 93.9 bits (223), Expect = 6e-20
Identities = 45/126 (35%), Positives = 72/126 (57%)
Frame = +1
Query: 10 HNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPA 189
H + Q +E +K + LN L Q++ NQ +IIF + ++ E + R I G+
Sbjct: 264 HGVTQYYAFVEEKQKVHCLNTLFQKLQINQ-----SIIFCNSVQRVELLARKILELGFSC 318
Query: 190 VCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHR 369
+H +Q R+ V + F++G LV +D+ RG+D+ + VINFD+P +SE Y+HR
Sbjct: 319 FYIHARMSQSHRNRVFHDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNSETYLHR 378
Query: 370 IGRTGR 387
IGR+GR
Sbjct: 379 IGRSGR 384
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 88.6 bits (210), Expect = 2e-18
Identities = 46/138 (33%), Positives = 75/138 (54%)
Frame = +1
Query: 10 HNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPA 189
H + Q +++EK KL LL + NQ IIFV++ ++ ++ + + +PA
Sbjct: 308 HGLQQYYVKLKDNEKNRKLFDLLDLLEFNQ-----VIIFVKSVQRCTALSHLLLKQNFPA 362
Query: 190 VCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHR 369
+C+H Q+ER QFK +LVAT++ RG+D++ + V N+D P S+ Y+HR
Sbjct: 363 ICIHRGMKQEERLARYQQFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHR 422
Query: 370 IGRTGRSKAKGTSYAFFS 423
+ R GR KG + F S
Sbjct: 423 VARAGRFGTKGLAITFVS 440
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 86.2 bits (204), Expect = 1e-17
Identities = 40/89 (44%), Positives = 56/89 (62%)
Frame = +1
Query: 187 AVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIH 366
A +HG + Q++R+ L K G ILVATDVA RG+D+ + +VIN+D + EDY H
Sbjct: 311 ATTLHGGRNQEQREFALSSLKGGSKDILVATDVAGRGIDIKDVSHVINYDMAKTIEDYTH 370
Query: 367 RIGRTGRSKAKGTSYAFFSPSNSRQARDL 453
RIGRTGR+ G + +F + S+S DL
Sbjct: 371 RIGRTGRAGKTGIAVSFLTQSDSGVFYDL 399
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 86.2 bits (204), Expect = 1e-17
Identities = 44/105 (41%), Positives = 63/105 (60%)
Frame = +1
Query: 112 KTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAA 291
+T+IF +TK++A + N V +HGD Q++R+ L F+EG+ LVATDVAA
Sbjct: 307 RTMIFAQTKKEANELALNSVLKQETQV-LHGDIPQKQREVTLKSFREGKFRCLVATDVAA 365
Query: 292 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFSP 426
RGLD+ I V+ + P + YIHR GRTGR+ +G F+ P
Sbjct: 366 RGLDIPEIDLVVQCEPPKDVDAYIHRSGRTGRAGREGICIVFYKP 410
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 83.8 bits (198), Expect = 6e-17
Identities = 40/107 (37%), Positives = 66/107 (61%)
Frame = +1
Query: 103 PGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATD 282
P I+F + + + +T +++ + A +H +K Q R +++ F++G+ ILVATD
Sbjct: 331 PYPPVIVFTSSIQNVDYVTELLKQEQFHASGLHSEKPQDYRFKLVKAFRDGKVDILVATD 390
Query: 283 VAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFS 423
VA+RGLD + +VIN+D P++ E YIHR GRTGR G + +F +
Sbjct: 391 VASRGLDFPEVTHVINYDLPDTIECYIHRCGRTGRIGHHGIATSFLT 437
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 81.8 bits (193), Expect = 2e-16
Identities = 34/86 (39%), Positives = 55/86 (63%)
Frame = +1
Query: 112 KTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAA 291
+ +IF T+RK + + + MHGD +Q+ERD ++ +F+ G S +L+ TD+ A
Sbjct: 332 QAVIFANTRRKVDWLAAKMTEKDHTVSSMHGDMSQKERDIIMKEFRSGSSRVLITTDLLA 391
Query: 292 RGLDVDGIKYVINFDYPNSSEDYIHR 369
RG+DV + VIN+D P++ E+YIHR
Sbjct: 392 RGIDVHQVSLVINYDLPSNRENYIHR 417
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 72.9 bits (171), Expect(2) = 5e-16
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Frame = +1
Query: 202 GDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRT 381
G+ + R E +F+ + ILV TD+A+RGLD + +VINFD+PNS DYIHR+GRT
Sbjct: 728 GNSGTRIRCERFEKFQNKTADILVCTDIASRGLDTSDVSHVINFDFPNSMVDYIHRVGRT 787
Query: 382 GRSK---AKGTSYAFFSPSNSRQAR 447
GR + TS A S++R AR
Sbjct: 788 GRVSHVTPQVTSRATSFISHNRDAR 812
Score = 28.3 bits (60), Expect(2) = 5e-16
Identities = 13/55 (23%), Positives = 32/55 (58%)
Frame = +1
Query: 43 EHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGD 207
+HEK ++ LL++ ++ PG +TI+F + + + R++ ++ + +HG+
Sbjct: 636 QHEKAERIVELLKK--DSKSPG-QTIVFCNSASSCDWLARHLEQHNLSLIRLHGN 687
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 80.2 bits (189), Expect = 8e-16
Identities = 37/89 (41%), Positives = 56/89 (62%)
Frame = +1
Query: 112 KTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAA 291
+ +IF E K ++I + G AV +HGDK+Q+ER + +F +G +LVATDVA+
Sbjct: 89 QVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVATDVAS 148
Query: 292 RGLDVDGIKYVINFDYPNSSEDYIHRIGR 378
+GLD I++VINFD P E+Y+ G+
Sbjct: 149 KGLDFPDIQHVINFDMPEDIENYVLLCGQ 177
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 80.2 bits (189), Expect = 8e-16
Identities = 45/119 (37%), Positives = 65/119 (54%)
Frame = +1
Query: 46 HEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQER 225
H ++ L LL+E NQ I+F T + + + + G V +H +Q ER
Sbjct: 231 HVRDCYLVHLLRENDDNQS----VIVFTHTCKNCQVLVSMFHKLGLTCVGLHSLLSQGER 286
Query: 226 DEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKG 402
L +FK G ILVATDVA+RGLD+ ++ V+N + P +DYIHR+GRT R+ G
Sbjct: 287 LAALARFKSGTIKILVATDVASRGLDIPQVELVVNSNIPADPKDYIHRVGRTARAGRGG 345
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 80.2 bits (189), Expect = 8e-16
Identities = 37/89 (41%), Positives = 56/89 (62%)
Frame = +1
Query: 112 KTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAA 291
+ +IF E K ++I + G AV +HGDK+Q+ER + +F +G +LVATDVA+
Sbjct: 89 QVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVATDVAS 148
Query: 292 RGLDVDGIKYVINFDYPNSSEDYIHRIGR 378
+GLD I++VINFD P E+Y+ G+
Sbjct: 149 KGLDFPDIQHVINFDMPEDIENYVLLCGQ 177
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 78.6 bits (185), Expect = 2e-15
Identities = 33/86 (38%), Positives = 56/86 (65%)
Frame = +1
Query: 118 IIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARG 297
+IFV++K +A+ + + G +H D+TQ +RD ++ F+ G+ +L+AT++ RG
Sbjct: 387 LIFVQSKDRAKELFHELIYDGINVDVIHSDRTQAQRDNIVKSFRTGKIWVLIATELMGRG 446
Query: 298 LDVDGIKYVINFDYPNSSEDYIHRIG 375
+D G+ VIN+D+P S+ YIHRIG
Sbjct: 447 IDFKGVNLVINYDFPTSAVAYIHRIG 472
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 77.4 bits (182), Expect = 5e-15
Identities = 39/110 (35%), Positives = 62/110 (56%)
Frame = +1
Query: 103 PGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATD 282
PG +T++F T +T +R + +H Q++R + L +FK + +L+ATD
Sbjct: 456 PG-RTLVFANTIDCVRRLTSILRLVQLNPLPLHASMQQRQRLKNLDRFKASNTGLLLATD 514
Query: 283 VAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFSPSN 432
VAARGLD+ I++VI++ P E Y+HR GRT R+ +G S P +
Sbjct: 515 VAARGLDIANIEHVIHYQVPKDPEVYVHRSGRTARASHEGLSVVLVGPED 564
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 76.2 bits (179), Expect = 1e-14
Identities = 38/125 (30%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
Frame = +1
Query: 55 ENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEV 234
E + VL + +N+ K ++F + + + + P + +HG + QQ+R
Sbjct: 803 EKRFLVLFTFLKKNRSK--KVMVFFSSCNSVKYHSELLNYIDLPVLEIHGKQKQQKRTTT 860
Query: 235 LYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGR-SKAKGTSY 411
++F +S IL+ TDVAARGLD+ + +++ +D + ++YIHR+GRT R ++ KG +
Sbjct: 861 FFEFCNAKSGILLCTDVAARGLDIPEVDWIVQYDPADDPKEYIHRVGRTARGTEGKGHAL 920
Query: 412 AFFSP 426
F P
Sbjct: 921 LFLLP 925
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 75.8 bits (178), Expect = 2e-14
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 6/147 (4%)
Frame = +1
Query: 13 NILQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAV 192
NI Q VC+ E+K L G + ++F T+R A + + + G
Sbjct: 317 NIKQYYVVCKN--SEDKFEALCNMYGVLSI--GQCVVFCHTRRNAAWLAEKMVKEGHAVA 372
Query: 193 CMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSS------E 354
+ G+ T ++R VL +F+ G+ +L+ T+V+ARG+DV+ + VIN+D P E
Sbjct: 373 LLSGEITIEQRIAVLERFRLGKEKLLITTNVSARGIDVEQVTLVINYDMPMDMQGKADFE 432
Query: 355 DYIHRIGRTGRSKAKGTSYAFFSPSNS 435
Y+HRIGRTGR G + F S
Sbjct: 433 TYLHRIGRTGRFGKSGIAVNFIDGQRS 459
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 74.5 bits (175), Expect = 4e-14
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Frame = +1
Query: 157 TRNIRRYGWPAV--CMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVIN 330
T + R+ AV C G +TQ +R E + + K IL++TD+ ARG+D + + V+N
Sbjct: 229 TPDFHRFSLNAVSCCTAGSQTQAKRLEAMEKLKSFHCRILISTDLTARGIDAENVNLVVN 288
Query: 331 FDYPNSSEDYIHRIGRTGRSKAKGTSYAFFSPSNSRQARDL 453
D P++ E Y+HRIGR GR +G + + +N ++ R+L
Sbjct: 289 MDVPHNGETYLHRIGRAGRFGTEGMAVTYV--ANGKEEREL 327
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 70.9 bits (166), Expect = 5e-13
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
Frame = +1
Query: 34 VCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRY--GWPAVCMHGD 207
+C+ HEK ++L L+ +D K ++F T ++ + ++ + +HG
Sbjct: 70 ICRSHEKFSQLVAFLKA---RKDK--KNMVFFSTCACVNYFSKALTKFLPNVHIMALHG- 123
Query: 208 KTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGR 387
K + R ++ F++ S ILV TDV ARG+D+ + +VI +D P+S+ ++HR GRT R
Sbjct: 124 KMKSNRHKIFDSFRKLESGILVCTDVMARGVDIPEVNWVIQYDPPSSANAFVHRCGRTAR 183
Query: 388 SKAKGTSYAFFSPS 429
+G + F P+
Sbjct: 184 IGNEGNAVVFLLPT 197
>SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11)
Length = 87
Score = 60.5 bits (140), Expect = 7e-10
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = +1
Query: 241 QFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFF 420
QFK +LVAT++ RG+D++ + V N+D P S+ Y+HR+ R GR KG + F
Sbjct: 7 QFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFV 66
Query: 421 S 423
S
Sbjct: 67 S 67
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 59.7 bits (138), Expect = 1e-09
Identities = 23/58 (39%), Positives = 41/58 (70%)
Frame = +1
Query: 241 QFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYA 414
+F+ ++ ++V TDVAARG+D+ + VINF +P ++ ++HR+GR R+ GT+Y+
Sbjct: 520 KFQHKKTMVMVVTDVAARGIDIPMLDNVINFHFPPKAKLFVHRVGRVARAGRSGTAYS 577
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 59.7 bits (138), Expect = 1e-09
Identities = 30/67 (44%), Positives = 43/67 (64%)
Frame = +1
Query: 118 IIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARG 297
++F++TK A + + G A +HG+ TQ +R E L +FK G ILVATD+AARG
Sbjct: 12 LVFLQTKWMAHKLRIVLGLMGLNADELHGNLTQLQRLEALQKFKNGEVDILVATDLAARG 71
Query: 298 LDVDGIK 318
LD+ G+K
Sbjct: 72 LDITGVK 78
>SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 56.0 bits (129), Expect = 1e-08
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 11/147 (7%)
Frame = +1
Query: 13 NILQIVD-VCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRY---- 177
NI IV + + + L+ EI + +D G KTII+ +T ++ + +R
Sbjct: 136 NITYIVKYLSNSMDAKESFKWLVNEINERKDGGDKTIIYCQTIKQCSLVYGTLRSMLIEL 195
Query: 178 ---GWPAVCM-HGDKTQQERDEVLYQFK--EGRSSILVATDVAARGLDVDGIKYVINFDY 339
G P + M H ++ +D +L FK +G +LVAT G+D G+ I+F
Sbjct: 196 VANGKPKLEMLHSCTPKENKDAILESFKRLDGHVQVLVATIAFGMGIDCKGVHRTIHFGP 255
Query: 340 PNSSEDYIHRIGRTGRSKAKGTSYAFF 420
+ E +I GR GR SY +
Sbjct: 256 SKNCEAFIQETGRAGRDWKSSFSYLLY 282
>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 54.0 bits (124), Expect = 6e-08
Identities = 27/102 (26%), Positives = 47/102 (46%)
Frame = +1
Query: 118 IIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARG 297
II+ T+ + + + R G A H +RD+V ++ EG+ +++ AT G
Sbjct: 252 IIYCRTRDACQEVASRLSRKGLSAKPYHAGLKSDKRDKVQQEWMEGKVAVICATISFGMG 311
Query: 298 LDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFS 423
+D +++V ++ P S E Y GR GR F+S
Sbjct: 312 VDKGDVRFVAHWSLPQSMEGYYQESGRAGRDGQPSYCRLFYS 353
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/57 (45%), Positives = 35/57 (61%)
Frame = +1
Query: 118 IIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVA 288
+IFV K +E + N+R+ + +HGD Q ER +VL QFK+ ILVATDVA
Sbjct: 733 LIFVTKKLNSEELATNLRKNDFEVALLHGDMDQFERSKVLGQFKKREIPILVATDVA 789
>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
Length = 651
Score = 52.0 bits (119), Expect = 2e-07
Identities = 29/107 (27%), Positives = 48/107 (44%)
Frame = +1
Query: 106 GAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDV 285
G II+ +++ AE + + G A C H D E RS ++VAT
Sbjct: 313 GDSGIIYCFSRKDAEQVAIEMSSRGIKAACYHADMPP-----------ESRSQVVVATVA 361
Query: 286 AARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFSP 426
G+D +++VI+ + S E+Y GR GR + + + F+ P
Sbjct: 362 FGMGIDKSNVRFVIHHSFSKSMENYYQESGRAGRDEKRASCIVFYRP 408
>SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 51.6 bits (118), Expect = 3e-07
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +1
Query: 292 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGR 387
RG+D+ + VINFD+P +SE Y+HRIGR+GR
Sbjct: 5 RGIDIQSVNVVINFDFPKNSETYLHRIGRSGR 36
>SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 51.6 bits (118), Expect = 3e-07
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +1
Query: 292 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGR 387
RG+D+ + VINFD+P +SE Y+HRIGR+GR
Sbjct: 5 RGIDIQSVNVVINFDFPKNSETYLHRIGRSGR 36
>SB_1038| Best HMM Match : Helicase_C (HMM E-Value=1.1e-10)
Length = 435
Score = 51.2 bits (117), Expect = 4e-07
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Frame = +1
Query: 73 LLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRY-------GWPAVCM-HGDKTQQERD 228
L+ +I + +D G KTII+ +T ++ + +R G P + M H ++ +D
Sbjct: 188 LVNKINERKDGGDKTIIYCQTIKQCSLVYGTLRSMLIELVANGKPKLEMLHSCTPKENKD 247
Query: 229 EVLYQFK--EGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKG 402
+L FK +G +LVAT G+D G+ ++F + E +I G GR
Sbjct: 248 AILESFKRLDGHVQVLVATIAFGMGIDCKGVHRTMHFGPSKNCEAFIQETGHAGRDGKSS 307
Query: 403 TSYAFF 420
SY +
Sbjct: 308 FSYLLY 313
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 50.4 bits (115), Expect = 7e-07
Identities = 33/122 (27%), Positives = 52/122 (42%)
Frame = +1
Query: 88 GQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSI 267
G + PG K KRK + + + W A H + +R +V +F G
Sbjct: 788 GSDVTPGKKG---ANKKRKKQPVRAPL---SWEAESYHAGMSAAQRRKVQKRFMSGELRA 841
Query: 268 LVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFSPSNSRQAR 447
+ AT GLD ++ +I+++ P S E Y+ IGR GR + F R+ +
Sbjct: 842 VAATVAFGMGLDKSDVRAIIHYNMPKSFESYVQEIGRAGRDGKPSHCHVFL----DREGQ 897
Query: 448 DL 453
DL
Sbjct: 898 DL 899
>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 49.6 bits (113), Expect = 1e-06
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +1
Query: 202 GDKTQQERDEVLYQFKEGRS-SILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGR 378
G TQ+E++EV+ +F+ G +I++AT VA GLD+D YVI +D + + GR
Sbjct: 597 GGMTQREQEEVIAKFRAGSECNIIIATTVAEEGLDIDDCSYVIRYDMMGNEISSVQSRGR 656
Query: 379 TGRSKAKG 402
R+K G
Sbjct: 657 V-RTKTGG 663
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 48.8 bits (111), Expect = 2e-06
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Frame = +1
Query: 118 IIFVETKRKAENITRNIRRYGWPAVCMHGDKT---QQERDEVLYQFKEGRSSILVATDVA 288
++F+ ++ +R G A ++ + + L F+ G+ +LV T+
Sbjct: 429 LVFIHRNHSVDDFVWELRYLGLNAAALYKQVAIPDPTKYHKFLRDFRTGQIQLLVGTEET 488
Query: 289 ARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTS 408
RGLD + +V + P + E+Y+H GR GR GT+
Sbjct: 489 VRGLDFKELDHVYLMEVPKNVEEYLHLCGRVGRQGRPGTA 528
>SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18)
Length = 282
Score = 47.6 bits (108), Expect = 5e-06
Identities = 21/64 (32%), Positives = 40/64 (62%)
Frame = +1
Query: 220 ERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAK 399
++++VL F++ + ++LVAT V GLDV +V+ FD+P + Y+ GR++AK
Sbjct: 132 KQEKVLKMFRKHQINLLVATSVVEEGLDVPKCNFVVRFDFPQNFRSYVQ---SKGRARAK 188
Query: 400 GTSY 411
+++
Sbjct: 189 NSAF 192
>SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20)
Length = 556
Score = 47.6 bits (108), Expect = 5e-06
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 6/142 (4%)
Frame = +1
Query: 19 LQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKA----ENITRNIRRYGWP 186
L I V ++ E EN +++++ N KTII+ ++ E ++ N+
Sbjct: 228 LNIKKVGRDVELENIFTTIIKKLS-NGGQVEKTIIYCKSINACGDIYEVLSENVESKETY 286
Query: 187 AVCMHGDKTQQERDEVLYQFKEGRSSI--LVATDVAARGLDVDGIKYVINFDYPNSSEDY 360
A+ H + EVL +F + S I +VAT G+D+ + ++I+F P+ E Y
Sbjct: 287 AM-FHSKTPDSIQKEVLGEFIKSNSKIRVVVATCALGMGVDIPDVDHIIHFGIPSEVEHY 345
Query: 361 IHRIGRTGRSKAKGTSYAFFSP 426
+ IGR GR + ++ P
Sbjct: 346 VQEIGRGGRDGRLCYATLYYKP 367
>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
Length = 1728
Score = 46.8 bits (106), Expect = 9e-06
Identities = 22/61 (36%), Positives = 38/61 (62%)
Frame = +1
Query: 211 TQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 390
+Q+E+ EV+++F+ G + LV+T V GLD+ + ++ FD S + R+GRTGR
Sbjct: 565 SQKEQLEVVHRFRMGGYNTLVSTCVGEEGLDIGDVDLIVCFDAHASPIRLVQRMGRTGRK 624
Query: 391 K 393
+
Sbjct: 625 R 625
>SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 46.8 bits (106), Expect = 9e-06
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 12/141 (8%)
Frame = +1
Query: 52 KENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIR-------RYGWPAVCMHGD- 207
K +L LL +N +K I+F T+ + I+ ++ A+ GD
Sbjct: 919 KLEELKKLLLGFHENDSKESKGILFTVTRGSTVGLVEWIKESEDLKHKFRPKALVGGGDG 978
Query: 208 ---KTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFD-YPNSSEDYIHRIG 375
+QQE++ ++ +FK+G +IL+AT VA GLD+ +VI +D Y N I
Sbjct: 979 VVGMSQQEQELIIEEFKKGVVNILIATSVAEEGLDIKDCSFVIRYDTYGNE----ISSTQ 1034
Query: 376 RTGRSKAKGTSYAFFSPSNSR 438
GR +A Y + + + S+
Sbjct: 1035 ARGRIRADQGQYVYLADARSK 1055
>SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/74 (27%), Positives = 39/74 (52%)
Frame = +1
Query: 202 GDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRT 381
G + ++E++ + Q +S + A+RGLD+ + +VI D+ + +HR+GRT
Sbjct: 80 GTEIKEEKEVIEAQLPLSYNSRTIKDGFASRGLDIPNVTHVIQLDFATDAAQMLHRVGRT 139
Query: 382 GRSKAKGTSYAFFS 423
R+ + G F +
Sbjct: 140 ARAGSHGKVVNFIT 153
>SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19)
Length = 1463
Score = 46.0 bits (104), Expect = 2e-05
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 16/133 (12%)
Frame = +1
Query: 37 CQEHEKENKLNVLLQEIGQ-----NQDPGAKTIIFVETKRKAENITRNIRRYGW------ 183
C ++++K LL+E+ QD ++ IIFV +R A + ++ Y
Sbjct: 528 CLGIKQKDKFQFLLEELTSFTDKTKQDDNSRGIIFVRMRRTAYKLCERLKGYDVISEYLN 587
Query: 184 -PAVCMHGDKTQQ----ERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNS 348
A+ HG E++ +L F+ GR +L++T V GLDV V+ FD +
Sbjct: 588 PTAIVGHGGGDGMSWYGEQEVILKSFRTGRIKLLISTSVLEEGLDVPVCNLVVRFDSTMN 647
Query: 349 SEDYIHRIGRTGR 387
+ + GR R
Sbjct: 648 LKSLVQSRGRASR 660
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 43.6 bits (98), Expect = 8e-05
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +1
Query: 307 DGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFS 423
+ + VINFD P + E+Y+H+IGR GR A G S +F +
Sbjct: 395 EAVSKVINFDMPPTYEEYVHQIGRAGRLGATGWSISFIN 433
>SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27)
Length = 2056
Score = 43.6 bits (98), Expect = 8e-05
Identities = 28/126 (22%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Frame = +1
Query: 49 EKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRYGWPAVCMHGDK-TQQER 225
E ++K ++ EI D G I+F++ ++ ++R G ++ HG T+ E+
Sbjct: 1024 EVKSKWENVVDEIIDEAD-GEYAIVFMDFVSSVKDANACMQRRGATSLKYHGKGLTENEK 1082
Query: 226 DEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGT 405
EV+ +F+ + L+AT+ G D + V + P + ++ GR GR+
Sbjct: 1083 IEVIKKFQSKDAQFLIATEAYQVGTHDDHVNLVCHVGCPRTLTSWVQEFGRGGRAGNNAK 1142
Query: 406 SYAFFS 423
+ +++
Sbjct: 1143 AIIYYN 1148
>SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 43.6 bits (98), Expect = 8e-05
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 13/132 (9%)
Frame = +1
Query: 55 ENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRY----------GWPAVCM-H 201
E + L +++ ++ +TI + +TK + I IR G P V M H
Sbjct: 266 EEYFSWLTEQLRIEKEKSTRTIFYCQTKNQCGIIYAVIRGLLGKENMHSTTGSPLVEMLH 325
Query: 202 GDKTQQERDEVLYQF--KEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 375
+ +L F ++G +L+AT G+D G+K VI++ S E YI G
Sbjct: 326 SCTPHANKQNILDSFSQQDGTVRLLIATIAFGMGVDCKGVKRVIHYGPSKSVEAYIQETG 385
Query: 376 RTGRSKAKGTSY 411
R GR + +Y
Sbjct: 386 RAGRDGSNSVAY 397
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 42.3 bits (95), Expect = 2e-04
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Frame = +1
Query: 19 LQIVDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRNIRRY--GWPAV 192
LQ VC E +KLN L I + +K ++FV + ++ + I RR G P +
Sbjct: 249 LQSYVVC---ELPDKLNFLFSFIRNHLK--SKILVFVSSCKQVKFIYEGFRRLQPGIPLM 303
Query: 193 CMHGDKTQQERDEVLYQFKEGRSSILVATDVAARGL 300
++G + Q +R + +F + +L ATD+AARGL
Sbjct: 304 ALYGKQKQLKRVAIYDEFCKKTQCVLFATDIAARGL 339
>SB_9751| Best HMM Match : Helicase_C (HMM E-Value=3.4e-05)
Length = 798
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +1
Query: 253 GRSSILVATDVA-ARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFSPS 429
G I + D A G+D ++YVI++ P S E Y GR GR K ++S
Sbjct: 32 GYGMIGIGIDKAFGMGIDKGDVRYVIHYSMPKSLEGYYQECGRAGRDGKKAECILYYSYG 91
Query: 430 NSRQARDLV 456
+ + R ++
Sbjct: 92 DMHRIRRMI 100
>SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23)
Length = 226
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 196 MHGDKTQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRI- 372
+H E+D V+ +F +G S +L++T V G+DV ++ D +H++
Sbjct: 98 LHSRLDSSEKDLVMDRFIKGESQVLISTTVIEVGVDVPNATMMVIMDADRFGVSQLHQLR 157
Query: 373 GRTGRSKAKG 402
GR GR G
Sbjct: 158 GRIGRGNLPG 167
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 36.3 bits (80), Expect = 0.012
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +1
Query: 298 LDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAF 417
L +D ++N D+ EDYIHR+GRT R+ G S F
Sbjct: 111 LVMDEADRILNMDF--EKEDYIHRVGRTARAGRSGRSVTF 148
>SB_7386| Best HMM Match : Helicase_C (HMM E-Value=0.086)
Length = 100
Score = 33.5 bits (73), Expect = 0.086
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +1
Query: 118 IIFVETKRKAENITRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRSSILVATDVAARG 297
II+ T+ + + + R G A H +RD+V ++ EG+ +++ AT G
Sbjct: 34 IIYCRTRDACQEVASRLSRKGLSAKPYHAGLKSDKRDKVQQEWMEGKVAVICATISFGMG 93
Query: 298 LD 303
+D
Sbjct: 94 VD 95
>SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 33.1 bits (72), Expect = 0.11
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 295 GLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFSP 426
G+D+ + ++I++ P+ E Y+ IGR GR + ++ P
Sbjct: 2 GVDIPDVDHIIHYGIPSEVEHYVQEIGRGGRDGRLCHATLYYKP 45
>SB_1215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 31.9 bits (69), Expect = 0.26
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 340 PNSSEDYIHRIGRTGRSKAKGTSYAFFSPSNSRQARDLVS 459
P E Y IGR GR + Y F+ P + +R L++
Sbjct: 233 PKDIESYYQEIGRAGRDGEPSSCYVFYKPGDFATSRYLIN 272
>SB_12766| Best HMM Match : Helicase_C (HMM E-Value=5.8e-09)
Length = 185
Score = 30.7 bits (66), Expect = 0.61
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 265 ILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFS 423
++VAT+VA + +DGI Y S R GR GR +A G +Y ++
Sbjct: 133 VIVATNVAEASITIDGIVYESLVVTEISQASAEQRAGRAGRVRA-GKAYRLYT 184
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 30.7 bits (66), Expect = 0.61
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = -3
Query: 422 LKNAYEVPLALDLPVLPIR*M*SSEEFG*SKLITYLIPSTSRPLAATSVA---TSILERP 252
L+N L +L +L + SSE + ++ + L PST RPLA TS+A +L+
Sbjct: 1547 LRNDTSRLLGQNLSILKTPKVLSSETYARAQQMPAL-PSTERPLAETSIAHQKPGLLQPQ 1605
Query: 251 SLNWYNTS 228
SL YN S
Sbjct: 1606 SLPLYNPS 1613
>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
Length = 1197
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 229 EVLYQFKEGRSSILVATDVAARGLDVDGIKYVINFDY 339
++ + +G +VAT++A L VDGI +VI+ Y
Sbjct: 796 KIFQKAPDGVRKCVVATNIAETSLTVDGIMFVIDAGY 832
>SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1168
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 211 TQQERDEVLYQFKEGRSSILVATDVAARGLDVDGIKYVIN 330
+ +E+ +V Q G +VAT+VA L + IKYV++
Sbjct: 607 SSKEQAKVFQQSPGGARLCVVATNVAETSLTIPNIKYVVD 646
>SB_21686| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 798
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +1
Query: 28 VDVCQEHEKENKLNVLLQEIGQNQDPGAKTIIFVETKRKAENITRN 165
+++ +H++ + + LQE+G+ +D A TI+ E+ +T N
Sbjct: 3 IEITSQHQRLSCHDNRLQELGEFRDKHAHTILAAESPGSVHRVTLN 48
>SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2722
Score = 28.3 bits (60), Expect = 3.2
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 121 IFVETKRKAENITRNIRRYGWPAVCMH-GDKTQQERDEVLYQFKEGRSSILVATDVAARG 297
+F + KR + + R AV H T ERD + F++G +LVAT G
Sbjct: 534 VFEQLKRTHVGLDSVLMRTIPHAVAFHHAGLTFDERDIIEGAFRQGTIRVLVATSTLCSG 593
Query: 298 LDVDGIKYVI 327
+++ + +I
Sbjct: 594 VNLPARRVII 603
>SB_54662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 673
Score = 27.9 bits (59), Expect = 4.3
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +3
Query: 60 QIKCTSSRDWAKPRPWCKDHYIC*N*KKSGEHYQKYQTIWMA 185
+I+CT + W+ P+P CK + ++ Y + W+A
Sbjct: 376 KIQCTENGTWSHPQPICKGQELYSTILQNQTEYYELLNEWLA 417
>SB_49454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 27.5 bits (58), Expect = 5.6
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +1
Query: 253 GRSSILVATDVAARGLDVDGIKYVINFDY 339
G ++++T++A + + G+KYVI+ Y
Sbjct: 330 GARKVILSTNIAETSVTIPGVKYVIDTGY 358
>SB_52816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1622
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = -2
Query: 222 FLLCFVTVHAHSWPSISSDISGNVLRFSFSFNKYNGLCTRVLVLPNLLKKYI*FVFFF 49
FL+ + V+ SW + + S ++ + N Y+ C + + NL+KK F++ F
Sbjct: 1246 FLMHIIGVNMCSWFYVIIEESAEDMKPTKPPNTYSQSCNATMAMENLIKKANYFLYPF 1303
>SB_44906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 259 SSILVATDVAARGLDVDGIKYVIN 330
+ +++AT++A L +DGI YVI+
Sbjct: 311 AQVILATNIAETSLTIDGIIYVID 334
>SB_46577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 74 FFKRLGKTKTLVQRPLYLLKLKEKRRTLPEISDDMDGQLCACTVTK 211
FFK L KT ++ + + KE++RT I+D +D + C K
Sbjct: 55 FFK-LPKTNVYRKQCINIAYCKERKRTCSRIADAVDCDVLCCKEDK 99
>SB_2368| Best HMM Match : Patched (HMM E-Value=8.6e-08)
Length = 1420
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -3
Query: 356 SSEEFG*SKLITYLIPSTSRPLAATSVATSILERPSLNWYNTSSLSC 216
S+E KL+ Y+ STS A + + RP++ W N +S C
Sbjct: 183 SAETCSPQKLLEYM-GSTSNGQAPFDIHYPEIIRPNMTWMNQTSYKC 228
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -3
Query: 356 SSEEFG*SKLITYLIPSTSRPLAATSVATSILERPSLNWYNTSSLSC 216
S+E KL+ Y+ STS A + + RP++ W N +S C
Sbjct: 403 SAETCSPQKLLEYM-GSTSNGQAPFDIHYPEIIRPNMTWMNQTSYKC 448
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.133 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,871,252
Number of Sequences: 59808
Number of extensions: 306691
Number of successful extensions: 1032
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 932979724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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