Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_D18
         (286 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   0.84 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   0.84 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   3.4  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    21   3.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    19   7.8  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 0.84
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 25  LRHPESDRFPRFLRDVAR 78
           +RHPES+   R +R++ R
Sbjct: 289 IRHPESNPSERVMRELGR 306


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 0.84
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 123 TQRRGVMPLVLFWNLSGHIS*KSRKTVAFRMSE 25
           T  +G  PL + W L+GH   ++   V  R S+
Sbjct: 626 TVSKGDYPLNISWTLNGHFIDQTNGIVINRASK 658


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = -1

Query: 148 GETGIAEQNPTAGSDAVGFILELIGPHLVEIAENGRFQDVGVD 20
           GE+ I   +    +D V  +LE I   L+++ +N     +G D
Sbjct: 329 GESDIFNGHLNPDNDEVLQVLEDIYSDLLDLTDNNELFHLGSD 371


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 69  CGPISSRIKPTASLPAVGFC 128
           C P+  R+K  A L   G C
Sbjct: 58  CDPVGRRLKSLAPLVLRGSC 77


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 192 KCAIQSSPILSQI 154
           KC+IQS  +L+ I
Sbjct: 352 KCSIQSESLLNDI 364


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,881
Number of Sequences: 336
Number of extensions: 1148
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4897022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)