Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_D18
(286 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0026 - 31118997-31119113,31119700-31119900,31120032-311202... 111 6e-26
01_06_1361 - 36663859-36663985,36664353-36664543,36664746-366650... 92 5e-20
06_03_0809 + 24814590-24816593 29 0.44
05_05_0334 + 24156532-24156565,24156681-24156782,24157145-241572... 29 0.44
09_04_0727 + 19765175-19765384,19765523-19765595,19766476-197665... 29 0.58
08_02_0431 + 17053928-17054189,17054296-17054564,17054661-170548... 27 1.8
07_01_0794 - 6179424-6179714,6179797-6179844,6180189-6180248,618... 27 1.8
02_01_0228 + 1507314-1507566,1507645-1507913,1508010-1508213,150... 27 1.8
03_05_0051 - 20288456-20291728 27 2.3
01_04_0011 + 15067536-15068236,15068283-15068898 27 2.3
03_06_0547 - 34656862-34657217,34657444-34657540 26 5.4
02_04_0127 + 19992651-19993334,19993853-19993885,19994060-199941... 26 5.4
09_04_0597 - 18859601-18859818,18860914-18861083,18861250-188613... 25 7.1
08_01_0524 - 4560471-4560572,4560864-4560971,4561413-4561556,456... 25 7.1
01_01_0711 + 5506632-5507328,5507410-5507485,5507544-5508234 25 7.1
11_06_0217 - 21353558-21353660,21354680-21355510,21356340-213564... 25 9.4
07_01_0347 - 2509229-2509487,2509682-2509922,2510292-2510511,251... 25 9.4
06_01_1117 - 9206909-9206923,9207777-9208526 25 9.4
05_04_0397 - 20937280-20937386,20937494-20939681 25 9.4
05_03_0603 - 16117695-16118396,16118679-16118939,16120100-161201... 25 9.4
04_03_0739 + 19180048-19182039 25 9.4
04_03_0448 - 16020773-16021066,16023040-16023291,16023470-160236... 25 9.4
04_03_0350 + 14755619-14755692,14755697-14755883,14755964-147560... 25 9.4
03_06_0206 - 32353308-32353566,32353784-32354024,32354408-323546... 25 9.4
01_06_1106 + 34563368-34563679 25 9.4
>03_06_0026 -
31118997-31119113,31119700-31119900,31120032-31120218,
31120339-31120415,31120738-31120815,31120858-31120974,
31121047-31121175,31121327-31121479,31121589-31122044,
31122122-31122239,31122385-31122575,31123140-31123415,
31123524-31123700,31124040-31124141,31124227-31124459,
31125563-31125764
Length = 937
Score = 111 bits (268), Expect = 6e-26
Identities = 50/91 (54%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Frame = +2
Query: 8 GVAAIHSDILKATVFRDFYEMWPDKFQNKTNGITPRRWVLLCNPGLSDLICDKIG-EDWI 184
GVAAIHS+I+K VF FYEMWP KFQNKTNG+TPRRW+ CNP LS +I IG +DW+
Sbjct: 566 GVAAIHSEIVKEDVFNSFYEMWPAKFQNKTNGVTPRRWIRFCNPELSAIISKWIGSDDWV 625
Query: 185 AHLDKLKDLKRWAKDPSFQRAIMKVKQENEL 277
+ DKL +LK++A D Q K+ N++
Sbjct: 626 LNTDKLAELKKFADDEDLQSEWRAAKKANKV 656
>01_06_1361 -
36663859-36663985,36664353-36664543,36664746-36665009,
36665215-36665373,36665476-36665679,36665765-36665983,
36666191-36666322,36666406-36666523,36666670-36666854,
36667263-36667355,36667819-36668008,36668500-36668585,
36668671-36668847,36669141-36669320,36669423-36669623
Length = 841
Score = 92.3 bits (219), Expect = 5e-20
Identities = 42/94 (44%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Frame = +2
Query: 8 GVAAIHSDILKATVFRDFYEMWPDKFQNKTNGITPRRWVLLCNPGLSDLICDKIGED-WI 184
GVA +HS+ILK +F D+ +WP+KFQNKTNGITPRRW+ CNP LS+++ + D W
Sbjct: 457 GVAELHSNILKEELFADYLSIWPNKFQNKTNGITPRRWLRFCNPELSEIVTKWLKTDQWT 516
Query: 185 AHLDKLKDLKRWAKDPSFQRAIMKVKQENELTLA 286
++LD L L+++A D K ++ LA
Sbjct: 517 SNLDLLTGLRKFADDEKLHAEWASAKLASKKRLA 550
>06_03_0809 + 24814590-24816593
Length = 667
Score = 29.5 bits (63), Expect = 0.44
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 3 TRASRPSTPTS*KRPF-SAISTRCGPISSRIKPTASLPAVGFCSAIPVSP 149
T AS P P + F SA + PI+ AS+PAV +++PVSP
Sbjct: 48 TAASPPPPPCTAYLTFRSAPPSYASPITVSYLLNASVPAVAAANSVPVSP 97
>05_05_0334 + 24156532-24156565,24156681-24156782,24157145-24157274,
24157361-24157445,24157525-24157666,24157762-24157894,
24157993-24158254,24158331-24158519,24158596-24158721,
24158809-24159195,24159288-24159398,24159629-24160423,
24161114-24161255,24161350-24162518,24162609-24162818,
24163010-24163478,24164037-24164464
Length = 1637
Score = 29.5 bits (63), Expect = 0.44
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 35 LKATVFRDFYEMWPDKFQNKTNGITPRRWVLLC 133
LK+ R++ + P++F NK + +W LLC
Sbjct: 1073 LKSLDIREYMKSMPEEFHNKEQTLKDIKWELLC 1105
>09_04_0727 +
19765175-19765384,19765523-19765595,19766476-19766570,
19766666-19768450,19768533-19768721,19768816-19768958,
19769075-19769320,19769975-19770059,19770117-19770191,
19770304-19770369,19770466-19770712,19770824-19771242
Length = 1210
Score = 29.1 bits (62), Expect = 0.58
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = +2
Query: 29 DILKATVFRDFYEMWPDKFQNKTNGITPRRWVLLCNP 139
D LK VF F ++PD F N ITP R VLLC P
Sbjct: 395 DALKEMVF--FPLLYPDFFANYH--ITPPRGVLLCGP 427
>08_02_0431 +
17053928-17054189,17054296-17054564,17054661-17054864,
17054974-17055066,17055160-17055255,17055339-17055683,
17055935-17056018,17056106-17056171,17056268-17056333,
17056436-17056501,17056635-17056700,17056798-17056863,
17056981-17057028,17057107-17057169,17057255-17057320,
17057483-17057542,17057888-17057935,17058019-17058255,
17058346-17058366
Length = 741
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 137 PGLSDLICDKIGEDWIAHLDKLKDL 211
P + + I KIGE W + KLKDL
Sbjct: 184 PRMEEFILKKIGERWRQYKAKLKDL 208
>07_01_0794 -
6179424-6179714,6179797-6179844,6180189-6180248,
6180411-6180476,6180562-6180624,6180703-6180750,
6180868-6180933,6181031-6181096,6181230-6181295,
6181510-6181575,6181663-6181746,6181839-6181907,
6181998-6182342,6182426-6182521,6182615-6182707,
6182817-6183020,6183117-6183385,6183492-6183753
Length = 753
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 137 PGLSDLICDKIGEDWIAHLDKLKDL 211
P + + I KIGE W + KLKDL
Sbjct: 184 PRMEEFILKKIGERWRQYKAKLKDL 208
>02_01_0228 +
1507314-1507566,1507645-1507913,1508010-1508213,
1508323-1508415,1508509-1508604,1508688-1509032,
1509123-1509191,1509284-1509367,1509455-1509520,
1509735-1509800,1509934-1509999,1510097-1510162,
1510280-1510327,1510406-1510468,1510554-1510619,
1510782-1510841,1511185-1511232,1511315-1511605
Length = 750
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 137 PGLSDLICDKIGEDWIAHLDKLKDL 211
P + + I KIGE W + KLKDL
Sbjct: 181 PRMEEFILKKIGERWRQYKAKLKDL 205
>03_05_0051 - 20288456-20291728
Length = 1090
Score = 27.1 bits (57), Expect = 2.3
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = +2
Query: 122 VLLCNPGLSDLICDKIGEDW--IAHL 193
V LCNP L D + + G DW IAH+
Sbjct: 1054 VALCNPVLKDRLRKECGIDWPKIAHI 1079
>01_04_0011 + 15067536-15068236,15068283-15068898
Length = 438
Score = 27.1 bits (57), Expect = 2.3
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 6 RASRPSTPTS*KRPFSAISTRCGPISSRIKPTASLPAVGFCSAIPVSPI 152
R+S P TP+S + + R GP+ + P A P++ F IPV I
Sbjct: 244 RSSSP-TPSSTEGKVTVDDNRVGPLYEHVFPPALAPSLSFV-GIPVKVI 290
>03_06_0547 - 34656862-34657217,34657444-34657540
Length = 150
Score = 25.8 bits (54), Expect = 5.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -3
Query: 104 CRWFYSGTYRATSRRNRGKRSLSGC 30
C+W YS TYR R G +GC
Sbjct: 74 CQWIYSCTYRGKMRTQYGLAE-AGC 97
>02_04_0127 +
19992651-19993334,19993853-19993885,19994060-19994128,
19994494-19994581,19994627-19995132,19995210-19995503,
19995557-19995906,19996020-19996456,19996718-19996743,
19996995-19997078
Length = 856
Score = 25.8 bits (54), Expect = 5.4
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -2
Query: 156 IRSERPGLQSKTQRRGVMPLVLFWNLSGHIS*KSRKTVAFRMSEWMAATPS 4
+R P L RRG PL+ +W + K +T+ R + ++A S
Sbjct: 277 VRQSGPFLDQLGLRRGDGPLICYWYYGAELRDKLVETLYSRQNHSLSADSS 327
>09_04_0597 -
18859601-18859818,18860914-18861083,18861250-18861303,
18862759-18863284,18864465-18864663,18866787-18866852,
18866999-18867300,18867394-18867634,18867716-18867973,
18868076-18868207
Length = 721
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1
Query: 238 PARHNEGEAGERA 276
P+ H EGEAGERA
Sbjct: 658 PSVHQEGEAGERA 670
>08_01_0524 -
4560471-4560572,4560864-4560971,4561413-4561556,
4561655-4561747,4561906-4561968,4562086-4562133,
4562677-4562835,4563251-4563589
Length = 351
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 140 GLSDLICDKIGEDWIAHLDKLKDLKRWAKD 229
G S L+C+++ + W A D + DL + K+
Sbjct: 274 GDSKLVCNQVSDVWRARHDTMADLCKRVKE 303
>01_01_0711 + 5506632-5507328,5507410-5507485,5507544-5508234
Length = 487
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 184 DPVFAYLVAD*IGETGIAEQNPTAGSDAVGFI 89
DPV + AD +G G A N TAG++ F+
Sbjct: 407 DPVLDAIDADLLGGRGRANGNGTAGAEGDMFV 438
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 7/24 (29%)
Frame = +2
Query: 158 CDKIGEDWI-------AHLDKLKD 208
CD++G+DW+ A LDKL D
Sbjct: 450 CDEVGDDWVLRPGPGAARLDKLMD 473
>11_06_0217 -
21353558-21353660,21354680-21355510,21356340-21356464,
21356546-21357076,21357207-21357650,21358469-21358612
Length = 725
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 246 ARWNDGSFAQRFKSLSLSKCAIQSSPILSQIRSERPG 136
A W +GS+A RF+ L+ A S ++ + ++ G
Sbjct: 582 APWTNGSYAYRFERHGLTVAAFWSPFLVRAVETDPDG 618
>07_01_0347 -
2509229-2509487,2509682-2509922,2510292-2510511,
2510943-2511278,2512047-2512103,2512187-2512210
Length = 378
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +2
Query: 137 PGLSDL---ICDKIGEDWIAHLDKLKDLKRW 220
PG+ D + ++ GE W L +LK K+W
Sbjct: 343 PGIQDTLKRVAEQRGESWEQKLSQLKKNKQW 373
>06_01_1117 - 9206909-9206923,9207777-9208526
Length = 254
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 246 ARWNDGSFAQRFKSLSLSKCAIQSSPILSQIRSERPG 136
A W +GS+A RF+ L+ A S ++ + ++ G
Sbjct: 153 APWTNGSYAYRFERHGLTVAAFWSPFLVRAVETDPDG 189
>05_04_0397 - 20937280-20937386,20937494-20939681
Length = 764
Score = 25.0 bits (52), Expect = 9.4
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 72 GPISSRIKPTASLPAVGFCSAIPVSP 149
G + + + A+ + G+C+AIPV+P
Sbjct: 717 GRVQTVVGDLATQGSAGYCNAIPVAP 742
>05_03_0603 -
16117695-16118396,16118679-16118939,16120100-16120144,
16120362-16120453,16120568-16120706,16121027-16121063,
16121147-16121434,16122000-16122074,16122505-16122581,
16123092-16123256,16123387-16123543,16124558-16124733,
16124828-16124940,16125398-16125428,16126487-16126605,
16126696-16126789,16127384-16127458,16127548-16127666,
16127751-16127907,16129252-16129398
Length = 1022
Score = 25.0 bits (52), Expect = 9.4
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -2
Query: 228 SFAQRFKSLSLSKCAIQSSPILSQIRSERPGLQS--KTQRRGVMPLVLFWNLSGHIS 64
SF Q+ + S C P L+ I ER +S T R+ + L+ +++ GH+S
Sbjct: 295 SFVQKLQVNDTSDCV--RGPHLASIEIERQRCRSGNPTDRKFIEALINYFHRFGHLS 349
>04_03_0739 + 19180048-19182039
Length = 663
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
Frame = -1
Query: 94 FILELIGPH----LVEIAENGRFQDVGVDG 17
++L+++ PH L I NG F+D+ VDG
Sbjct: 628 YLLDVVVPHQEHVLPMIPSNGAFKDIIVDG 657
>04_03_0448 -
16020773-16021066,16023040-16023291,16023470-16023605,
16023713-16023937,16024467-16024851,16025142-16025421
Length = 523
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 188 HLDKLKDLKRWAKDPSFQRAIMKVK 262
HL +LK++ RW KD S I ++
Sbjct: 213 HLKELKEISRWWKDVSGYMGINHIR 237
>04_03_0350 +
14755619-14755692,14755697-14755883,14755964-14756072,
14756157-14756379,14756716-14756794,14757222-14757273,
14757354-14757416,14757519-14757616,14757970-14758031,
14758066-14758159,14758430-14758509,14758617-14758686,
14758807-14758864,14758973-14759037,14759127-14759221,
14759318-14759402
Length = 497
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 139 GIAEQNPTAGSDAVGFILELIGPHLVEIA 53
G ++ PT + + F+L LIGP +E A
Sbjct: 419 GPSQPAPTFVGNVIAFLLNLIGPKGLEFA 447
>03_06_0206 -
32353308-32353566,32353784-32354024,32354408-32354627,
32354981-32355316,32355632-32355688,32355787-32355810
Length = 378
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +2
Query: 137 PGLSDL---ICDKIGEDWIAHLDKLKDLKRW 220
PG+ D + ++ GE W L +LK K+W
Sbjct: 343 PGIQDTLKKVAEQRGESWEQKLSQLKKNKQW 373
>01_06_1106 + 34563368-34563679
Length = 103
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 21 STPTS*KRPFSAISTRCGPISSRIKPTASLP 113
+TPTS A S++ P R+ P+AS P
Sbjct: 15 ATPTSTADRLGAASSQAPPRPGRVPPSASAP 45
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,018,356
Number of Sequences: 37544
Number of extensions: 146526
Number of successful extensions: 476
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 475
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 291966432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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