Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_D18
(286 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64844-2|AAO25987.1| 846|Caenorhabditis elegans Hypothetical pr... 132 3e-32
U64844-1|AAK72092.1| 882|Caenorhabditis elegans Hypothetical pr... 132 3e-32
AL021175-9|CAA15969.2| 444|Caenorhabditis elegans Hypothetical ... 31 0.18
Z68006-3|CAA91997.2| 633|Caenorhabditis elegans Hypothetical pr... 28 1.2
AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 26 3.8
Z71181-4|CAA94897.1| 486|Caenorhabditis elegans Hypothetical pr... 26 5.0
AL023847-1|CAA19545.1| 364|Caenorhabditis elegans Hypothetical ... 25 6.6
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 25 8.7
Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical pr... 25 8.7
AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein. 25 8.7
>U64844-2|AAO25987.1| 846|Caenorhabditis elegans Hypothetical
protein T22F3.3b protein.
Length = 846
Score = 132 bits (320), Expect = 3e-32
Identities = 58/93 (62%), Positives = 75/93 (80%)
Frame = +2
Query: 8 GVAAIHSDILKATVFRDFYEMWPDKFQNKTNGITPRRWVLLCNPGLSDLICDKIGEDWIA 187
GVAA+HSD+LK++ FRDFYE +PD+FQNKTNGITPRRW+LL NP L+DLI +KIGE WI
Sbjct: 456 GVAALHSDLLKSSTFRDFYEFYPDRFQNKTNGITPRRWLLLSNPSLADLIVEKIGESWIT 515
Query: 188 HLDKLKDLKRWAKDPSFQRAIMKVKQENELTLA 286
+LD+L+ LK +A D F +I +VK EN+ +A
Sbjct: 516 NLDELQKLKEYANDAGFLDSIRRVKLENKQQVA 548
>U64844-1|AAK72092.1| 882|Caenorhabditis elegans Hypothetical
protein T22F3.3a protein.
Length = 882
Score = 132 bits (320), Expect = 3e-32
Identities = 58/93 (62%), Positives = 75/93 (80%)
Frame = +2
Query: 8 GVAAIHSDILKATVFRDFYEMWPDKFQNKTNGITPRRWVLLCNPGLSDLICDKIGEDWIA 187
GVAA+HSD+LK++ FRDFYE +PD+FQNKTNGITPRRW+LL NP L+DLI +KIGE WI
Sbjct: 492 GVAALHSDLLKSSTFRDFYEFYPDRFQNKTNGITPRRWLLLSNPSLADLIVEKIGESWIT 551
Query: 188 HLDKLKDLKRWAKDPSFQRAIMKVKQENELTLA 286
+LD+L+ LK +A D F +I +VK EN+ +A
Sbjct: 552 NLDELQKLKEYANDAGFLDSIRRVKLENKQQVA 584
>AL021175-9|CAA15969.2| 444|Caenorhabditis elegans Hypothetical
protein Y6E2A.8 protein.
Length = 444
Score = 30.7 bits (66), Expect = 0.18
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Frame = -2
Query: 234 DGSFAQRFKSL-SLSKCAIQSS-PILSQIRSER-PGLQSKTQR--RGVMPLVLFWNLSGH 70
D +F +RF +L SL A+ SS P+L R+ + L+ K+ R G MPLV FWN +
Sbjct: 107 DNNF-KRFSALTSLEYLAVLSSEPLLKLERNHQLMSLEFKSLRVINGTMPLVTFWNDNYP 165
Query: 69 IS*KSRKTVAFRMSEWMAAT 10
I R AF+ + + AT
Sbjct: 166 IE-MRRSNRAFQEFQSLLAT 184
>Z68006-3|CAA91997.2| 633|Caenorhabditis elegans Hypothetical
protein K09C8.4 protein.
Length = 633
Score = 27.9 bits (59), Expect = 1.2
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 203 KDLKRWAKDPSFQRAIMKVKQE 268
K LKRW +DP +Q+ + +K +
Sbjct: 598 KSLKRWRRDPHYQKCLHTLKNK 619
>AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical
protein Y48G1BM.5 protein.
Length = 994
Score = 26.2 bits (55), Expect = 3.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 146 SDLICDKIGEDWIAHLDKLKDLKRWAKD 229
SD + I D H+D +KDL +W KD
Sbjct: 777 SDWLNANIDCDKQQHMDYIKDLHKWYKD 804
>Z71181-4|CAA94897.1| 486|Caenorhabditis elegans Hypothetical
protein K07C5.4 protein.
Length = 486
Score = 25.8 bits (54), Expect = 5.0
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 131 CNPGLSDLICDKIGEDWIAHLDKLKDLKRW 220
C P LS LI +++G I+H L +L ++
Sbjct: 298 CAPSLSALIGEQVGARLISHAGSLTNLAKY 327
>AL023847-1|CAA19545.1| 364|Caenorhabditis elegans Hypothetical
protein Y57A10C.3 protein.
Length = 364
Score = 25.4 bits (53), Expect = 6.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1
Query: 91 ILELIGPHLVEIAENGRF 38
+LEL+ P LV IAEN F
Sbjct: 276 LLELVPPSLVHIAENALF 293
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -2
Query: 267 SCFTFIMARWNDGSFAQ 217
SC+T I+++ N GSFA+
Sbjct: 444 SCYTMILSKNNGGSFAK 460
>Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical
protein F22B5.7 protein.
Length = 1415
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 188 HLDKLKDLKRWAKDPSFQRAIMKVKQENE 274
+ D+L++ K+W + A++KV +NE
Sbjct: 19 NFDELRESKKWQERKEALEALLKVLTDNE 47
>AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein.
Length = 1415
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 188 HLDKLKDLKRWAKDPSFQRAIMKVKQENE 274
+ D+L++ K+W + A++KV +NE
Sbjct: 19 NFDELRESKKWQERKEALEALLKVLTDNE 47
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,324,478
Number of Sequences: 27780
Number of extensions: 112031
Number of successful extensions: 362
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 362
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 270584450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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