Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_D18
         (286 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   0.42 
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    21   3.9  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    21   3.9  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    20   6.8  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    19   9.0  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 0.42
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = -2

Query: 282 SVSSFSCFTFIMARWNDGSFAQRFKSLSLSKCAIQSSPILSQIRSERPGLQS 127
           S+ + S   F+M    D  FA+R  SL LS   +     +  I ++RPGL++
Sbjct: 306 SIHNSSNARFLMDSMFD--FAERVNSLRLSDAELGLFCSVVVIAADRPGLRN 355


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 69  CGPISSRIKPTASLPAVGFC 128
           C P+  R+K  A L   G C
Sbjct: 61  CDPVGRRLKSLAPLVLRGAC 80


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 69  CGPISSRIKPTASLPAVGFC 128
           C P+  R+K  A L   G C
Sbjct: 61  CDPVGRRLKSLAPLVLRGAC 80


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = -2

Query: 198 LSKCAIQSSPILSQIRSERPGLQSKTQRRGVMPLVLFWNLSGHIS 64
           LS CAI     L+  +      + +++R   + +V  W L+G I+
Sbjct: 127 LSLCAISIDRYLAVTQPLIYSRRRRSKRLAGLMIVAVWVLAGAIT 171


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 108 VMPLVLFWNLSGHIS 64
           VMP+ L + +SG+ S
Sbjct: 94  VMPMALLYEISGNWS 108


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,093
Number of Sequences: 438
Number of extensions: 1364
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5619645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)