Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_D17
         (344 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    25   0.29 
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    25   0.29 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   4.7  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    20   6.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   8.2  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 24.6 bits (51), Expect = 0.29
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 76  CEGFTGFSCEYFSCQRYSRCDEN 144
           C    GF   + SC +Y +CD N
Sbjct: 25  CPDDFGFYPHHTSCDKYWKCDNN 47


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 24.6 bits (51), Expect = 0.29
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 76  CEGFTGFSCEYFSCQRYSRCDEN 144
           C    GF   + SC +Y +CD N
Sbjct: 25  CPDDFGFYPHHTSCDKYWKCDNN 47


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 76  CEGFTGFSCEYFSCQRYSRC 135
           CE F+G+ C+   CQ    C
Sbjct: 373 CE-FSGYDCDSNPCQNGGVC 391


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 172 FHSSFWAEVSFHH 134
           FH+ F  E S HH
Sbjct: 230 FHNGFMQEQSTHH 242


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -1

Query: 344 GVHQ*ATQLKWYHRL*HHLVQSKH 273
           G+HQ A     Y  L H L  S H
Sbjct: 204 GMHQMANYSTDYSSLTHSLAASNH 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,429
Number of Sequences: 336
Number of extensions: 1350
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)