Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_D17
(344 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 139 4e-34
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 139 4e-34
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 67 3e-12
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 67 3e-12
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 62 8e-11
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 60 3e-10
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 60 3e-10
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 60 3e-10
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 57 3e-09
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 57 3e-09
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 53 6e-08
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 53 6e-08
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 53 6e-08
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 46 6e-06
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 46 6e-06
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 43 5e-05
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 31 0.17
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 31 0.17
AC024776-7|AAK68469.1| 411|Caenorhabditis elegans Nuclear pore ... 27 3.6
AC024776-5|AAK68470.3| 1090|Caenorhabditis elegans Nuclear pore ... 27 3.6
U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical pr... 27 4.8
AF068721-9|AAC19265.1| 570|Caenorhabditis elegans Hypothetical ... 27 4.8
AC006682-2|AAF39957.1| 370|Caenorhabditis elegans Hypothetical ... 26 6.3
Z36752-5|CAA85328.2| 533|Caenorhabditis elegans Hypothetical pr... 26 8.3
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 139 bits (337), Expect = 4e-34
Identities = 67/102 (65%), Positives = 79/102 (77%)
Frame = +2
Query: 38 MAAISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 217
M++I LNPKAELAR + AL +NIS A+G+QDVM++NLGPKGT+KMLVSGAGDIK+TKDG
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDG 60
Query: 218 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGEL 343
NVLLHEM IQHPTAS+IA+ VLLIGEL
Sbjct: 61 NVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGEL 102
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 139 bits (337), Expect = 4e-34
Identities = 67/102 (65%), Positives = 79/102 (77%)
Frame = +2
Query: 38 MAAISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 217
M++I LNPKAELAR + AL +NIS A+G+QDVM++NLGPKGT+KMLVSGAGDIK+TKDG
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDG 60
Query: 218 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGEL 343
NVLLHEM IQHPTAS+IA+ VLLIGEL
Sbjct: 61 NVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGEL 102
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 67.3 bits (157), Expect = 3e-12
Identities = 30/80 (37%), Positives = 45/80 (56%)
Frame = +2
Query: 104 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 283
NI AAK + D ++T+LGP+G KM+ SG GD+ IT DG +L++M + HPTA ++
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSK 95
Query: 284 XXXXXXXXXXXXXVLLIGEL 343
V++ G L
Sbjct: 96 AQDIEAGDGTTTVVVMAGAL 115
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 67.3 bits (157), Expect = 3e-12
Identities = 30/80 (37%), Positives = 45/80 (56%)
Frame = +2
Query: 104 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 283
NI AAK + D ++T+LGP+G KM+ SG GD+ IT DG +L++M + HPTA ++
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSK 95
Query: 284 XXXXXXXXXXXXXVLLIGEL 343
V++ G L
Sbjct: 96 AQDIEAGDGTTTVVVMAGAL 115
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 62.5 bits (145), Expect = 8e-11
Identities = 28/80 (35%), Positives = 44/80 (55%)
Frame = +2
Query: 104 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 283
NI+A K I DV++T+LGP+ +KML+ G I +T DGN +L E+ ++HP A +
Sbjct: 28 NINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILREITVKHPAAKSMIEIAR 87
Query: 284 XXXXXXXXXXXXXVLLIGEL 343
++L GE+
Sbjct: 88 TQDEETGDGTTSVIILAGEV 107
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 60.5 bits (140), Expect = 3e-10
Identities = 29/85 (34%), Positives = 46/85 (54%)
Frame = +2
Query: 89 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 268
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 269 ARXXXXXXXXXXXXXXXXVLLIGEL 343
V+L G L
Sbjct: 93 VELSKSQDHEIGDGTTGVVVLAGAL 117
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 60.5 bits (140), Expect = 3e-10
Identities = 29/85 (34%), Positives = 46/85 (54%)
Frame = +2
Query: 89 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 268
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 269 ARXXXXXXXXXXXXXXXXVLLIGEL 343
V+L G L
Sbjct: 93 VELSKSQDHEIGDGTTGVVVLAGAL 117
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 60.5 bits (140), Expect = 3e-10
Identities = 29/85 (34%), Positives = 46/85 (54%)
Frame = +2
Query: 89 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 268
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 269 ARXXXXXXXXXXXXXXXXVLLIGEL 343
V+L G L
Sbjct: 93 VELSKSQDHEIGDGTTGVVVLAGAL 117
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 57.2 bits (132), Expect = 3e-09
Identities = 24/80 (30%), Positives = 43/80 (53%)
Frame = +2
Query: 104 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 283
N++AA I +++K++LGP G KMLV GD+ +T DG +L +++++HP ++
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQ 84
Query: 284 XXXXXXXXXXXXXVLLIGEL 343
V++ EL
Sbjct: 85 LQDEEVGDGTTSVVIVAAEL 104
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 57.2 bits (132), Expect = 3e-09
Identities = 24/80 (30%), Positives = 43/80 (53%)
Frame = +2
Query: 104 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 283
N++AA I +++K++LGP G KMLV GD+ +T DG +L +++++HP ++
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQ 84
Query: 284 XXXXXXXXXXXXXVLLIGEL 343
V++ EL
Sbjct: 85 LQDEEVGDGTTSVVIVAAEL 104
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 52.8 bits (121), Expect = 6e-08
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +2
Query: 38 MAAISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 205
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 206 TKDGNVLLHEMQIQHPTASLI 268
T DG +L + + +P A ++
Sbjct: 61 TNDGATILKSIGVDNPAAKVL 81
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 52.8 bits (121), Expect = 6e-08
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +2
Query: 38 MAAISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 205
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 206 TKDGNVLLHEMQIQHPTASLI 268
T DG +L + + +P A ++
Sbjct: 61 TNDGATILKSIGVDNPAAKVL 81
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 52.8 bits (121), Expect = 6e-08
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +2
Query: 38 MAAISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 205
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 206 TKDGNVLLHEMQIQHPTASLI 268
T DG +L + + +P A ++
Sbjct: 61 TNDGATILKSIGVDNPAAKVL 81
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 46.4 bits (105), Expect = 6e-06
Identities = 27/99 (27%), Positives = 43/99 (43%)
Frame = +2
Query: 47 ISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 226
I LL E + + NI+A + + D ++T LGP+G K++V G I+ DG +
Sbjct: 6 IILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
Query: 227 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGEL 343
L + I P AS + V+L E+
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEI 104
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 46.4 bits (105), Expect = 6e-06
Identities = 27/99 (27%), Positives = 43/99 (43%)
Frame = +2
Query: 47 ISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 226
I LL E + + NI+A + + D ++T LGP+G K++V G I+ DG +
Sbjct: 6 IILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
Query: 227 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGEL 343
L + I P AS + V+L E+
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEI 104
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 43.2 bits (97), Expect = 5e-05
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +2
Query: 89 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 268
+A+ NI A + +++ GP G KM+++ + +T D +L E++IQHP A +I
Sbjct: 26 EAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQHPAARII 85
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 31.5 bits (68), Expect = 0.17
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 77 ARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPT 256
A QA+ V ++ + D + +GPKG ++ G KITKDG + + ++
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKY 81
Query: 257 ASLIAR 274
+L A+
Sbjct: 82 QNLGAK 87
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 31.5 bits (68), Expect = 0.17
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 77 ARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPT 256
A QA+ V ++ + D + +GPKG ++ G KITKDG + + ++
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKY 81
Query: 257 ASLIAR 274
+L A+
Sbjct: 82 QNLGAK 87
>AC024776-7|AAK68469.1| 411|Caenorhabditis elegans Nuclear pore
complex protein protein8, isoform a protein.
Length = 411
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +2
Query: 83 ASQALAVNISA--AKGIQDVMKTNLGPKGTMKM 175
ASQ+ A+N+ A AKG++ + GP+ TM M
Sbjct: 322 ASQSAALNLVATTAKGVRLYFSVSTGPQSTMAM 354
>AC024776-5|AAK68470.3| 1090|Caenorhabditis elegans Nuclear pore
complex protein protein8, isoform b protein.
Length = 1090
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +2
Query: 83 ASQALAVNISA--AKGIQDVMKTNLGPKGTMKM 175
ASQ+ A+N+ A AKG++ + GP+ TM M
Sbjct: 237 ASQSAALNLVATTAKGVRLYFSVSTGPQSTMAM 269
>U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical
protein F28B4.3 protein.
Length = 2229
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 79 EGFTGFSCEYFSCQRYSRCDEN*PRP 156
EGFTGF C+ C S D N P
Sbjct: 397 EGFTGFHCQNIVCPGASGIDFNAENP 422
>AF068721-9|AAC19265.1| 570|Caenorhabditis elegans Hypothetical
protein ZK1055.7 protein.
Length = 570
Score = 26.6 bits (56), Expect = 4.8
Identities = 18/73 (24%), Positives = 38/73 (52%)
Frame = +2
Query: 32 LEMAAISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITK 211
L++A + + +AE+ R V +S G+ +V+ NL K + G+ I++
Sbjct: 15 LKIAEVKVFTDRAEIRRL-----VKVSLKSGVNEVVLKNL-----CKTMAQGS--IRVEG 62
Query: 212 DGNVLLHEMQIQH 250
GN ++H++ I++
Sbjct: 63 RGNAIIHDVVIKN 75
>AC006682-2|AAF39957.1| 370|Caenorhabditis elegans Hypothetical
protein R193.3 protein.
Length = 370
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 217 AIFSDFNITCPRN*HFHSSFWAEV 146
A+ SDFN+ P N H H+ +A +
Sbjct: 222 ALVSDFNLQNPFNPHLHAEAYASI 245
>Z36752-5|CAA85328.2| 533|Caenorhabditis elegans Hypothetical
protein F35H8.6 protein.
Length = 533
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 229 EKYVAIFSDFNITCPRN*HFHSSFWAEVSFHH 134
+K + IF D I P +H++FW E H
Sbjct: 432 KKEMLIFQDMVIDVPYTELYHAAFWVEFIERH 463
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,292,536
Number of Sequences: 27780
Number of extensions: 130689
Number of successful extensions: 292
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 289
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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