Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_D17
(344 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g16070.1 68418.m01878 chaperonin, putative similar to SWISS-P... 117 2e-27
At3g02530.1 68416.m00241 chaperonin, putative similar to SWISS-P... 117 2e-27
At5g26360.1 68418.m03151 chaperonin, putative similar to SWISS-P... 64 2e-11
At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit / TCP... 60 5e-10
At3g18190.1 68416.m02314 chaperonin, putative similar to SWISS-P... 58 2e-09
At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit, pu... 55 1e-08
At3g03960.1 68416.m00415 chaperonin, putative similar to SWISS-P... 54 3e-08
At3g11830.1 68416.m01450 chaperonin, putative similar to SWISS-P... 53 4e-08
At5g56500.1 68418.m07051 chaperonin, putative similar to SWISS-P... 33 0.039
At3g23990.1 68416.m03013 chaperonin (CPN60) (HSP60) identical to... 33 0.039
At3g13860.1 68416.m01751 chaperonin, putative similar to SWISS-P... 33 0.039
At3g13470.1 68416.m01695 chaperonin, putative similar SWISS-PROT... 33 0.039
At1g55490.2 68414.m06348 RuBisCO subunit binding-protein beta su... 33 0.039
At1g55490.1 68414.m06347 RuBisCO subunit binding-protein beta su... 33 0.039
At2g33210.1 68415.m04069 chaperonin, putative similar to SWISS-P... 33 0.067
At1g26230.1 68414.m03200 chaperonin, putative similar to SWISS-P... 31 0.16
At1g67760.1 68414.m07732 T-complex protein 1 epsilon subunit, pu... 29 0.63
At5g40780.2 68418.m04951 lysine and histidine specific transport... 27 4.4
At5g40780.1 68418.m04950 lysine and histidine specific transport... 27 4.4
At3g02060.1 68416.m00169 DEAD/DEAH box helicase, putative simila... 26 5.9
At1g51690.2 68414.m05825 serine/threonine protein phosphatase 2A... 26 7.7
At1g51690.1 68414.m05824 serine/threonine protein phosphatase 2A... 26 7.7
At1g24360.1 68414.m03072 3-oxoacyl-[acyl-carrier protein] reduct... 26 7.7
>At5g16070.1 68418.m01878 chaperonin, putative similar to
SWISS-PROT:P80317 T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 117 bits (282), Expect = 2e-27
Identities = 56/100 (56%), Positives = 71/100 (71%)
Frame = +2
Query: 44 AISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNV 223
++ +LNP AE+ S AL + I+AAKG+QDV+K+NLGPKGT+KMLV G+GDIK+TKDGN
Sbjct: 2 SVRVLNPNAEVLNKSAALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNT 61
Query: 224 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGEL 343
LL EMQIQ+PTA +IAR V+ IGEL
Sbjct: 62 LLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGEL 101
>At3g02530.1 68416.m00241 chaperonin, putative similar to
SWISS-PROT:P80317- T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 117 bits (282), Expect = 2e-27
Identities = 56/100 (56%), Positives = 71/100 (71%)
Frame = +2
Query: 44 AISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNV 223
++ +LNP AE+ S AL + I+AAKG+QDV+K+NLGPKGT+KMLV G+GDIK+TKDGN
Sbjct: 2 SVRVLNPNAEVLNKSAALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNT 61
Query: 224 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGEL 343
LL EMQIQ+PTA +IAR V+ IGEL
Sbjct: 62 LLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGEL 101
>At5g26360.1 68418.m03151 chaperonin, putative similar to
SWISS-PROT:P50143- T-complex protein 1, gamma subunit
(TCP-1-gamma) [Xenopus laevis]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 555
Score = 64.5 bits (150), Expect = 2e-11
Identities = 29/101 (28%), Positives = 50/101 (49%)
Frame = +2
Query: 41 AAISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGN 220
A + +L+ + S+ NI A+K + D+++T LGP+ +KML+ G I +T DGN
Sbjct: 3 APVLVLSDSLKRESGSKVHHGNIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTNDGN 62
Query: 221 VLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGEL 343
+L E+ + HP A + ++L GE+
Sbjct: 63 AILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEM 103
>At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit /
TCP-1-alpha / chaperonin (CCT1) identical to
SWISS-PROT:P28769- T-complex protein 1, alpha subunit
(TCP-1-alpha) [Arabidopsis thaliana]
Length = 545
Score = 59.7 bits (138), Expect = 5e-10
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +2
Query: 44 AISLLNPKAELARAS--QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 217
+IS NP R S N+ A + + +++KT+LGP G KMLV GD+ IT DG
Sbjct: 2 SISAQNPDISGDRQSGQDVRTQNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDG 61
Query: 218 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGEL 343
+L ++++HP A ++ V++ EL
Sbjct: 62 ATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAEL 103
>At3g18190.1 68416.m02314 chaperonin, putative similar to
SWISS-PROT:P50991- T-complex protein 1, delta subunit
(TCP-1-delta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 536
Score = 58.0 bits (134), Expect = 2e-09
Identities = 24/80 (30%), Positives = 44/80 (55%)
Frame = +2
Query: 104 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 283
NI++A+ + D ++T+LGPKG KM+ + G++ IT DG +L++M++ P A ++
Sbjct: 33 NINSARAVSDAVRTSLGPKGMDKMISTANGEVIITNDGATILNKMEVLQPAAKMLVELSK 92
Query: 284 XXXXXXXXXXXXXVLLIGEL 343
V++ G L
Sbjct: 93 SQDSAAGDGTTTVVVIAGAL 112
>At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 535
Score = 54.8 bits (126), Expect = 1e-08
Identities = 28/88 (31%), Positives = 42/88 (47%)
Frame = +2
Query: 80 RASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTA 259
R A NI+A K + +++++LGPKG KML GDI IT DG +L +M + + A
Sbjct: 25 RGIDAQKANIAAGKAVARILRSSLGPKGMDKMLQGPDGDITITNDGATILEQMDVDNQIA 84
Query: 260 SLIARXXXXXXXXXXXXXXXXVLLIGEL 343
L+ V++ G L
Sbjct: 85 KLMVELSRSQDYEIGDGTTGVVVMAGAL 112
>At3g03960.1 68416.m00415 chaperonin, putative similar to
SWISS-PROT:P42932- T-complex protein 1, theta subunit
(TCP-1-theta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 549
Score = 54.0 bits (124), Expect = 3e-08
Identities = 25/90 (27%), Positives = 44/90 (48%)
Frame = +2
Query: 74 LARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHP 253
L+ +A+ NI A K + + +T+LGP G KM+++ + +T D +++E++IQHP
Sbjct: 22 LSGLDEAVIKNIEACKELSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEIQHP 81
Query: 254 TASLIARXXXXXXXXXXXXXXXXVLLIGEL 343
A L+ + GEL
Sbjct: 82 AAKLLVLAAKAQQEEIGDGANLTISFAGEL 111
>At3g11830.1 68416.m01450 chaperonin, putative similar to
SWISS-PROT:P80313 T-complex protein 1, eta subunit
(TCP-1-eta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 557
Score = 53.2 bits (122), Expect = 4e-08
Identities = 27/98 (27%), Positives = 44/98 (44%)
Frame = +2
Query: 47 ISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 226
I LL + ++ L NI+A + DV++T LGP+G K++ G + I+ DG +
Sbjct: 9 IILLKEGTDTSQGKAQLVSNINACTAVGDVVRTTLGPRGMDKLIHDDKGSVTISNDGATI 68
Query: 227 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGE 340
+ + I HP A ++ VLL E
Sbjct: 69 MKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAE 106
>At5g56500.1 68418.m07051 chaperonin, putative similar to
SWISS-PROT:P08927- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 597
Score = 33.5 bits (73), Expect = 0.039
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +2
Query: 125 IQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIAR 274
+ D++ LGPKG +L S G +I DG + E++++ P ++ A+
Sbjct: 74 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAK 123
>At3g23990.1 68416.m03013 chaperonin (CPN60) (HSP60) identical to
SWISS-PROT:P29197- chaperonin CPN60, mitochondrial
precursor (HSP60) [Arabidopsis thaliana]
Length = 577
Score = 33.5 bits (73), Expect = 0.039
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 71 ELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 217
E+ +A A+ + + + D +K +GPKG ++ G K+TKDG
Sbjct: 35 EIKFGVEARALMLKGVEDLADAVKVTMGPKGRNVVIEQSWGAPKVTKDG 83
>At3g13860.1 68416.m01751 chaperonin, putative similar to
SWISS-PROT:P29197- chaperonin CPN60, mitochondrial
precursor (HSP60) [Arabidopsis thaliana] ; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 572
Score = 33.5 bits (73), Expect = 0.039
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +2
Query: 92 ALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQ 247
A A + + + +K +GPKG ++ S G KITKDG + + Q
Sbjct: 42 ARAAMLQGVSEVAEAVKVTMGPKGRNVIIESSYGGPKITKDGVTVAKSISFQ 93
>At3g13470.1 68416.m01695 chaperonin, putative similar
SWISS-PROT:P21240- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Arabidopsis thaliana]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 596
Score = 33.5 bits (73), Expect = 0.039
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +2
Query: 125 IQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIAR 274
+ D++ LGPKG +L S G +I DG + E++++ P ++ A+
Sbjct: 74 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAK 123
>At1g55490.2 68414.m06348 RuBisCO subunit binding-protein beta
subunit, chloroplast / 60 kDa chaperonin beta subunit /
CPN-60 beta identical to SWISS-PROT:P21240- RuBisCO
subunit binding-protein beta subunit, chloroplast
precursor (60 kDa chaperonin beta subunit, CPN-60 beta)
[Arabidopsis thaliana]
Length = 600
Score = 33.5 bits (73), Expect = 0.039
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +2
Query: 125 IQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIAR 274
+ D++ LGPKG +L S G +I DG + E++++ P ++ A+
Sbjct: 78 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAK 127
>At1g55490.1 68414.m06347 RuBisCO subunit binding-protein beta
subunit, chloroplast / 60 kDa chaperonin beta subunit /
CPN-60 beta identical to SWISS-PROT:P21240- RuBisCO
subunit binding-protein beta subunit, chloroplast
precursor (60 kDa chaperonin beta subunit, CPN-60 beta)
[Arabidopsis thaliana]
Length = 600
Score = 33.5 bits (73), Expect = 0.039
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +2
Query: 125 IQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIAR 274
+ D++ LGPKG +L S G +I DG + E++++ P ++ A+
Sbjct: 78 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAK 127
>At2g33210.1 68415.m04069 chaperonin, putative similar to
SWISS-PROT:Q05046- chaperonin CPN60-2, mitochondrial
precursor (HSP60-2) [Cucurbita maxima]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 585
Score = 32.7 bits (71), Expect = 0.067
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 89 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 217
+A A+ + + + D +K +GPKG ++ G K+TKDG
Sbjct: 42 EARALMLRGVEDLADAVKVTMGPKGRNVIIEQSWGAPKVTKDG 84
>At1g26230.1 68414.m03200 chaperonin, putative similar to
SWISS-PROT:P08927- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 611
Score = 31.5 bits (68), Expect = 0.16
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 110 SAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHP 253
+ A + ++ LGPKG +L + G +I DG +L E++++ P
Sbjct: 57 AGADMVAKLLGVTLGPKGRNVVLQNKYGPPRIVNDGETVLKEIELEDP 104
>At1g67760.1 68414.m07732 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative similar to chaperonin containing TCP-1 (CCT)
epsilon subunit [Tetrahymena pyriformis] GI:15824416,
SP|P80316 T-complex protein 1, epsilon subunit
(TCP-1-epsilon) (CCT-epsilon) {Mus musculus}
Length = 142
Score = 29.5 bits (63), Expect = 0.63
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 92 ALAVNISAAKGIQDVMKTNLGPKGTMK 172
A NISA K + +++++LGPKG K
Sbjct: 29 AQKANISAGKAVARILRSSLGPKGMEK 55
>At5g40780.2 68418.m04951 lysine and histidine specific transporter,
putative strong similarity to lysine and histidine
specific transporter GI:2576361 from [Arabidopsis
thaliana]; contains Pfam profile PF01490: Transmembrane
amino acid transporter protein
Length = 445
Score = 26.6 bits (56), Expect = 4.4
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +2
Query: 68 AELARASQALAVNISAAKGIQDVMKTNLGPK---GTMKMLVSGAGDIKITKDGNVLLHEM 238
A ++ + +A SA+KG+Q+ ++ K GT+ SG GD+ G+ ++ E+
Sbjct: 188 AVMSLSYSTIAWASSASKGVQEDVQYGYKAKTTAGTVFNFFSGLGDVAFAYAGHNVVLEI 247
Query: 239 QIQHPT 256
Q P+
Sbjct: 248 QATIPS 253
>At5g40780.1 68418.m04950 lysine and histidine specific transporter,
putative strong similarity to lysine and histidine
specific transporter GI:2576361 from [Arabidopsis
thaliana]; contains Pfam profile PF01490: Transmembrane
amino acid transporter protein
Length = 446
Score = 26.6 bits (56), Expect = 4.4
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +2
Query: 68 AELARASQALAVNISAAKGIQDVMKTNLGPK---GTMKMLVSGAGDIKITKDGNVLLHEM 238
A ++ + +A SA+KG+Q+ ++ K GT+ SG GD+ G+ ++ E+
Sbjct: 189 AVMSLSYSTIAWASSASKGVQEDVQYGYKAKTTAGTVFNFFSGLGDVAFAYAGHNVVLEI 248
Query: 239 QIQHPT 256
Q P+
Sbjct: 249 QATIPS 254
>At3g02060.1 68416.m00169 DEAD/DEAH box helicase, putative similar
to C-terminal half of transcription-repair coupling
factor (TRCF) GB:Q55750 [Synechocystis PCC6803];
contains Pfam profile: helicases conserved C-terminal
domain
Length = 823
Score = 26.2 bits (55), Expect = 5.9
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +2
Query: 35 EMAAISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDI---KI 205
E ++ ++ K + R + L VN A G VMKTN+ K + S D+ +
Sbjct: 723 EPYSMEIILKKLYVRRMAADLGVNRIYASGKMVVMKTNMSKKVFKLITDSMTCDVYRSSL 782
Query: 206 TKDGNVLLHEMQIQHPTASLI 268
+G+ ++ E+ ++ P L+
Sbjct: 783 IYEGDQIMAELLLELPREQLL 803
>At1g51690.2 68414.m05825 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to 55 kDa B
regulatory subunit of phosphatase 2A (GI:710330)
[Arabidopsis thaliana]; similar to type 2A protein
serine/threonine phosphatase 55 kDa B regulatory
GI:1408460 [Arabidopsis thaliana]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 3 weak)
Length = 512
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 152 GPKGTMKMLVSGAGDIKITKDGNVLL 229
GPK +++ DIK K+G LL
Sbjct: 332 GPKSFFTEIIASVSDIKFAKEGRYLL 357
>At1g51690.1 68414.m05824 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to 55 kDa B
regulatory subunit of phosphatase 2A (GI:710330)
[Arabidopsis thaliana]; similar to type 2A protein
serine/threonine phosphatase 55 kDa B regulatory
GI:1408460 [Arabidopsis thaliana]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 3 weak)
Length = 513
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 152 GPKGTMKMLVSGAGDIKITKDGNVLL 229
GPK +++ DIK K+G LL
Sbjct: 333 GPKSFFTEIIASVSDIKFAKEGRYLL 358
>At1g24360.1 68414.m03072 3-oxoacyl-[acyl-carrier protein]
reductase, chloroplast / 3-ketoacyl-acyl carrier protein
reductase identical to 3-oxoacyl-[acyl-carrier protein]
reductase SP:P33207 from [Arabidopsis thaliana]
Length = 319
Score = 25.8 bits (54), Expect = 7.7
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 104 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQ 247
++S A + +MKT L GT+ ++V+ AG IT+D +L+ Q Q
Sbjct: 134 DVSKATDVDAMMKTALDKWGTIDVVVNNAG---ITRD-TLLIRMKQSQ 177
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,878,144
Number of Sequences: 28952
Number of extensions: 119362
Number of successful extensions: 306
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 306
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 419412672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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