Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_D16
         (526 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...   139   5e-35
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         26   0.89 
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    25   1.6  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   4.7  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   6.3  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   8.3  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score =  139 bits (337), Expect = 5e-35
 Identities = 64/112 (57%), Positives = 78/112 (69%)
 Frame = +3

Query: 189 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 368
           LFEKR KN+ IGQ++QP RDLSRFV+WPKYIRIQR +A+LQ+RLK+PPPINQFTQTLDK 
Sbjct: 37  LFEKRVKNYGIGQNVQPKRDLSRFVKWPKYIRIQRHRAILQKRLKIPPPINQFTQTLDKP 96

Query: 369 TAKGLFKILEKYRPETEAVRKERLQXXXXXXXXXXXXXXXXRPNTLRAGTNT 524
           TA+ + K  +KYRPE    R +RL+                R N LR G N+
Sbjct: 97  TAQQVMKCWKKYRPENPIARVQRLKAKAEAKAAGKEEPPSKRANQLRQGINS 148


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.8 bits (54), Expect = 0.89
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 278 YSHPASKGCVTASSQSAAANQPVHP 352
           + HP   G + A SQ     QPVHP
Sbjct: 165 HHHPGLTGLMQAPSQQQQHLQPVHP 189


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = +3

Query: 267 WPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 413
           W  ++    +    + RLKV     + T+T+++  A+ +   L ++RPE
Sbjct: 216 WKLFLMTSYRSVARKLRLKVCS--RELTETVERVAAEAINSKLHEHRPE 262


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 119 DREKSSGRSTCGEES*AQEDCKPS 190
           DR ++ GRS C   S +  D +PS
Sbjct: 884 DRSEAGGRSLCTNGSSSGRDSQPS 907


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +1

Query: 259 SCDGRNIFASSVK--RLCYSVVSKCRRQSTSSPRH*IKPQPKVCSRSWRNTGQKLRQS 426
           S D  ++  + ++  R  + +  + RR    SP H  KP+ +   R W+  GQ L +S
Sbjct: 204 SVDSSSVLGNGIQLHRHQHQLQPQQRRFHRQSPAHRRKPRWRRAGRRWK-VGQFLPES 260


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +1

Query: 364 KPQPKVCSRSWRNTGQKLR-QSGKSVYRKPPKPRLL 468
           +PQ +   R  +   Q+ R Q  +S  RKP KP L+
Sbjct: 464 QPQQQQQQRPQQQRPQQQRPQQQRSQQRKPAKPELI 499


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,149
Number of Sequences: 2352
Number of extensions: 9057
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)