Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_D15
         (184 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   1.5  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   1.5  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   1.5  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   1.5  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   1.5  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   1.5  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   1.5  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   1.5  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    20   2.6  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    20   2.6  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    19   3.5  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    19   3.5  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       19   3.5  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    19   4.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   4.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    19   4.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    19   4.6  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +2

Query: 116 SCTLPPPLRPPYTEH 160
           +C  PP + P Y +H
Sbjct: 41  ACYSPPQVAPQYPQH 55


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +2

Query: 116 SCTLPPPLRPPYTEH 160
           +C  PP + P Y +H
Sbjct: 41  ACYSPPQVAPQYPQH 55


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +2

Query: 116 SCTLPPPLRPPYTEH 160
           +C  PP + P Y +H
Sbjct: 41  ACYSPPQVAPQYPQH 55


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +2

Query: 116 SCTLPPPLRPPYTEH 160
           +C  PP + P Y +H
Sbjct: 41  ACYSPPQVAPQYPQH 55


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +2

Query: 116 SCTLPPPLRPPYTEH 160
           +C  PP + P Y +H
Sbjct: 41  ACYSPPQVAPQYPQH 55


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +2

Query: 116 SCTLPPPLRPPYTEH 160
           +C  PP + P Y +H
Sbjct: 41  ACYSPPQVAPQYPQH 55


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +2

Query: 116 SCTLPPPLRPPYTEH 160
           +C  PP + P Y +H
Sbjct: 41  ACYSPPQVAPQYPQH 55


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +2

Query: 116 SCTLPPPLRPPYTEH 160
           +C  PP + P Y +H
Sbjct: 41  ACYSPPQVAPQYPQH 55


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 140 GGGGVRYTTNATSH 99
           G GG R   ++TSH
Sbjct: 50  GDGGARSNADSTSH 63


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 140 GGGGVRYTTNATSH 99
           G GG R   ++TSH
Sbjct: 206 GDGGARSNADSTSH 219


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +2

Query: 128 PPPLRPPY 151
           PPP R PY
Sbjct: 117 PPPARSPY 124


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +2

Query: 128 PPPLRPPY 151
           PPP R PY
Sbjct: 117 PPPARSPY 124


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 111 IRRVPYPPPSGPLI 152
           IR  PY PP  P +
Sbjct: 133 IREKPYTPPRLPTV 146


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +2

Query: 131 PPLRPPYTEHWS 166
           PP  P YT H++
Sbjct: 163 PPPPPVYTHHYA 174


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 110  HSSCTLPPP 136
            HSS  +PPP
Sbjct: 1800 HSSTVVPPP 1808


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 7/33 (21%)
 Frame = -3

Query: 182 SFFTPNSNVPY-------KGAGGGGVRYTTNAT 105
           +F   NSN  Y       K AGGG     TNAT
Sbjct: 272 TFTLSNSNTNYNPGTYINKEAGGGSPGPYTNAT 304


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +1

Query: 118 VYLTPPPPAP 147
           +Y   PPPAP
Sbjct: 6   IYEESPPPAP 15



 Score = 18.2 bits (35), Expect = 8.1
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = +3

Query: 123 PYPPP 137
           PYPPP
Sbjct: 212 PYPPP 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,945
Number of Sequences: 336
Number of extensions: 502
Number of successful extensions: 24
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 40
effective length of database: 109,145
effective search space used:  2182900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)