BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_D15
(184 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011029-1|AAR30189.1| 382|Drosophila melanogaster RE45537p pro... 26 6.1
AE014296-2297|AAF49804.1| 535|Drosophila melanogaster CG10741-P... 26 6.1
AE014296-2296|AAN11828.1| 382|Drosophila melanogaster CG10741-P... 26 6.1
AE014296-856|AAN11603.1| 440|Drosophila melanogaster CG32241-PA... 26 6.1
BT010122-1|AAQ22591.1| 338|Drosophila melanogaster AT23277p pro... 26 8.0
AE013599-3164|AAF46701.2| 338|Drosophila melanogaster CG30391-P... 26 8.0
>BT011029-1|AAR30189.1| 382|Drosophila melanogaster RE45537p
protein.
Length = 382
Score = 26.2 bits (55), Expect = 6.1
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 121 YLTPPPPAPLYG 156
Y TPPPP P YG
Sbjct: 276 YNTPPPPPPAYG 287
>AE014296-2297|AAF49804.1| 535|Drosophila melanogaster CG10741-PA,
isoform A protein.
Length = 535
Score = 26.2 bits (55), Expect = 6.1
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 121 YLTPPPPAPLYG 156
Y TPPPP P YG
Sbjct: 429 YNTPPPPPPAYG 440
>AE014296-2296|AAN11828.1| 382|Drosophila melanogaster CG10741-PB,
isoform B protein.
Length = 382
Score = 26.2 bits (55), Expect = 6.1
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 121 YLTPPPPAPLYG 156
Y TPPPP P YG
Sbjct: 276 YNTPPPPPPAYG 287
>AE014296-856|AAN11603.1| 440|Drosophila melanogaster CG32241-PA
protein.
Length = 440
Score = 26.2 bits (55), Expect = 6.1
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1
Query: 115 VVYLTPPPPAPLY 153
VVY PPPP P+Y
Sbjct: 377 VVYTPPPPPPPVY 389
>BT010122-1|AAQ22591.1| 338|Drosophila melanogaster AT23277p
protein.
Length = 338
Score = 25.8 bits (54), Expect = 8.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 119 CTLPPPLRPPYTEH 160
C PPP+ PPY H
Sbjct: 226 CMRPPPMCPPYEHH 239
>AE013599-3164|AAF46701.2| 338|Drosophila melanogaster CG30391-PA
protein.
Length = 338
Score = 25.8 bits (54), Expect = 8.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 119 CTLPPPLRPPYTEH 160
C PPP+ PPY H
Sbjct: 226 CMRPPPMCPPYEHH 239
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,061,347
Number of Sequences: 53049
Number of extensions: 133663
Number of successful extensions: 964
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 24,988,368
effective HSP length: 41
effective length of database: 22,813,359
effective search space used: 433453821
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -