Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_D15
         (184 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   1.8  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    20   3.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    20   3.1  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    19   5.5  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    19   5.5  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    19   5.5  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    19   5.5  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    19   5.5  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    19   5.5  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    19   5.5  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          19   5.5  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          19   5.5  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          19   5.5  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          19   5.5  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          19   5.5  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          19   5.5  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          19   5.5  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    19   5.5  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    19   5.5  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    19   7.2  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    19   7.2  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    19   7.2  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           18   9.5  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           18   9.5  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    18   9.5  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    18   9.5  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.8 bits (39), Expect(2) = 1.8
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 146 GAGGGGVR 123
           GAGGGG R
Sbjct: 599 GAGGGGAR 606



 Score = 18.6 bits (36), Expect(2) = 1.8
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -3

Query: 176 FTPNSNVPYKGAGGGG 129
           FTP   V    AGG G
Sbjct: 586 FTPAVGVAAASAGGAG 601


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
          protein.
          Length = 492

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 45 TMRILFMSYYIVSSC 1
          T RIL + + ++SSC
Sbjct: 2  TTRILLLFFLLLSSC 16


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
          protein.
          Length = 628

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 45 TMRILFMSYYIVSSC 1
          T RIL + + ++SSC
Sbjct: 2  TTRILLLFFLLLSSC 16


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 118 VYLTPPPPAPLYGTL 162
           +Y   PPP P +G +
Sbjct: 137 MYRLRPPPNPRFGPM 151


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 118 VYLTPPPPAPLYGTL 162
           +Y   PPP P +G +
Sbjct: 137 MYRLRPPPNPRFGPM 151


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 118 VYLTPPPPAPLYGTL 162
           +Y   PPP P +G +
Sbjct: 137 MYRLRPPPNPRFGPM 151


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 118 VYLTPPPPAPLYGTL 162
           +Y   PPP P +G +
Sbjct: 137 MYRLRPPPNPRFGPM 151


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 118 VYLTPPPPAPLYGTL 162
           +Y   PPP P +G +
Sbjct: 137 MYRLRPPPNPRFGPM 151


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 118 VYLTPPPPAPLYGTL 162
           +Y   PPP P +G +
Sbjct: 137 MYRLRPPPNPRFGPM 151


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 118 VYLTPPPPAPLYGTL 162
           +Y   PPP P +G +
Sbjct: 137 MYRLRPPPNPRFGPM 151


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 118 VYLTPPPPAPLYGTL 162
           +Y   PPP P +G +
Sbjct: 386 MYRLRPPPNPRFGPM 400


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 118 VYLTPPPPAPLYGTL 162
           +Y   PPP P +G +
Sbjct: 386 MYRLRPPPNPRFGPM 400


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 118 VYLTPPPPAPLYGTL 162
           +Y   PPP P +G +
Sbjct: 386 MYRLRPPPNPRFGPM 400


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 118 VYLTPPPPAPLYGTL 162
           +Y   PPP P +G +
Sbjct: 386 MYRLRPPPNPRFGPM 400


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 118 VYLTPPPPAPLYGTL 162
           +Y   PPP P +G +
Sbjct: 386 MYRLRPPPNPRFGPM 400


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 118 VYLTPPPPAPLYGTL 162
           +Y   PPP P +G +
Sbjct: 386 MYRLRPPPNPRFGPM 400


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 118 VYLTPPPPAPLYGTL 162
           +Y   PPP P +G +
Sbjct: 385 MYRLRPPPNPRFGPM 399


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 118 VYLTPPPPAPLYGTL 162
           +Y   PPP P +G +
Sbjct: 370 MYRLRPPPNPRFGPM 384


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 118 VYLTPPPPAPLYGTL 162
           +Y   PPP P +G +
Sbjct: 386 MYRLRPPPNPRFGPM 400


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +1

Query: 127 TPPPPAP 147
           TPP PAP
Sbjct: 337 TPPKPAP 343


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +1

Query: 130  PPPPAPLYG 156
            PPPP P  G
Sbjct: 1357 PPPPPPSSG 1365


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -3

Query: 170 PNSNVPYKGAGGGGVR 123
           PNS       G GG+R
Sbjct: 279 PNSTTMNGSPGSGGIR 294


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 115 VVYLTPPPP 141
           +VYL P PP
Sbjct: 77  LVYLEPSPP 85


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 115 VVYLTPPPP 141
           +VYL P PP
Sbjct: 78  LVYLEPSPP 86


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = -1

Query: 49  QNYANSVYELLYSF 8
           + Y NS+Y++  +F
Sbjct: 68  ETYKNSIYDVSMTF 81


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = +3

Query: 108 SIRRVPYPPP 137
           ++ R PY PP
Sbjct: 213 NVERFPYQPP 222


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,121
Number of Sequences: 438
Number of extensions: 879
Number of successful extensions: 27
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 40
effective length of database: 128,823
effective search space used:  2576460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)