Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_D14
(157 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00006126C6 Cluster: PREDICTED: hypothetical protein;... 36 0.23
UniRef50_Q8H6Y5 Cluster: Ribosomal protein; n=1; Phytophthora in... 34 0.69
UniRef50_P99027 Cluster: 60S acidic ribosomal protein P2; n=85; ... 34 0.69
UniRef50_P05387 Cluster: 60S acidic ribosomal protein P2; n=16; ... 34 0.69
UniRef50_Q6ZL73 Cluster: Putative 60S acidic ribosomal protein; ... 33 1.6
UniRef50_A3BIA4 Cluster: Putative uncharacterized protein; n=1; ... 33 1.6
UniRef50_O01504 Cluster: 60S acidic ribosomal protein P2; n=3; C... 32 2.1
UniRef50_O00806 Cluster: 60S acidic ribosomal protein P2; n=7; E... 31 4.9
UniRef50_Q9GPU2 Cluster: 60S acidic ribosomal protein P2; n=3; E... 31 4.9
UniRef50_UPI0000F2D663 Cluster: PREDICTED: hypothetical protein;... 30 8.5
>UniRef50_UPI00006126C6 Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 138
Score = 35.5 bits (78), Expect = 0.23
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3
Query: 63 MRYVAAYLLAVLGGKASP 116
MRYVAAYLLAVLGG SP
Sbjct: 1 MRYVAAYLLAVLGGNESP 18
>UniRef50_Q8H6Y5 Cluster: Ribosomal protein; n=1; Phytophthora
infestans|Rep: Ribosomal protein - Phytophthora
infestans (Potato late blight fungus)
Length = 135
Score = 33.9 bits (74), Expect = 0.69
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3
Query: 63 MRYVAAYLLAVLGGKASP 116
MRY+AAYLLAVLGG +P
Sbjct: 1 MRYIAAYLLAVLGGHTTP 18
>UniRef50_P99027 Cluster: 60S acidic ribosomal protein P2; n=85;
Eukaryota|Rep: 60S acidic ribosomal protein P2 - Mus
musculus (Mouse)
Length = 115
Score = 33.9 bits (74), Expect = 0.69
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 63 MRYVAAYLLAVLGGKASPA 119
MRYVA+YLLA LGG +SP+
Sbjct: 1 MRYVASYLLAALGGNSSPS 19
>UniRef50_P05387 Cluster: 60S acidic ribosomal protein P2; n=16;
Bilateria|Rep: 60S acidic ribosomal protein P2 - Homo
sapiens (Human)
Length = 115
Score = 33.9 bits (74), Expect = 0.69
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 63 MRYVAAYLLAVLGGKASPA 119
MRYVA+YLLA LGG +SP+
Sbjct: 1 MRYVASYLLAALGGNSSPS 19
>UniRef50_Q6ZL73 Cluster: Putative 60S acidic ribosomal protein;
n=4; Oryza sativa|Rep: Putative 60S acidic ribosomal
protein - Oryza sativa subsp. japonica (Rice)
Length = 167
Score = 32.7 bits (71), Expect = 1.6
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 63 MRYVAAYLLAVLGGKASP 116
MR+VAAYL+A +GG ASP
Sbjct: 59 MRFVAAYLMATIGGNASP 76
>UniRef50_A3BIA4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 102
Score = 32.7 bits (71), Expect = 1.6
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 63 MRYVAAYLLAVLGGKASP 116
MR+VAAYL+A +GG ASP
Sbjct: 1 MRFVAAYLMATIGGNASP 18
>UniRef50_O01504 Cluster: 60S acidic ribosomal protein P2; n=3;
Chromadorea|Rep: 60S acidic ribosomal protein P2 -
Caenorhabditis elegans
Length = 107
Score = 32.3 bits (70), Expect = 2.1
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 63 MRYVAAYLLAVLGGKASPA 119
M+Y+ AYLLA LGG ASP+
Sbjct: 1 MKYLGAYLLATLGGNASPS 19
>UniRef50_O00806 Cluster: 60S acidic ribosomal protein P2; n=7;
Eukaryota|Rep: 60S acidic ribosomal protein P2 -
Plasmodium falciparum
Length = 112
Score = 31.1 bits (67), Expect = 4.9
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 63 MRYVAAYLLAVLGGKASPA 119
M+YVAAYL+ VLGG +P+
Sbjct: 3 MKYVAAYLMCVLGGNENPS 21
>UniRef50_Q9GPU2 Cluster: 60S acidic ribosomal protein P2; n=3;
Euplotes|Rep: 60S acidic ribosomal protein P2 - Euplotes
raikovi
Length = 113
Score = 31.1 bits (67), Expect = 4.9
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 63 MRYVAAYLLAVLGGKASPA 119
M+Y+AAY L VLGG +SP+
Sbjct: 1 MKYIAAYALLVLGGNSSPS 19
>UniRef50_UPI0000F2D663 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 74
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 63 MRYVAAYLLAVLGGKASPAC 122
M Y+AAYLLAVL SP C
Sbjct: 1 MHYMAAYLLAVLSSNKSPNC 20
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,593,959
Number of Sequences: 1657284
Number of extensions: 1965621
Number of successful extensions: 4079
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4079
length of database: 575,637,011
effective HSP length: 32
effective length of database: 522,603,923
effective search space used: 9929474537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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